Sequence details NCBI ID: XM_004852450.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atg2a
Gene Name autophagy related 2A, transcript variant X5
Entrez Gene ID 101706866

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATG2A ENSCPOG00000008573 (Guinea pig)

Gene Details

autophagy related 2A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007703, Guinea pig)

Protein Percentage 88.73%
CDS Percentage 88.59%
Ka/Ks Ratio 0.15441 (Ka = 0.0605, Ks = 0.3918)

ATG2A ENSG00000110046 (Human)

Gene Details

autophagy related 2A

External Links

Gene Match (Ensembl Protein ID: ENSP00000366475, Human)

Protein Percentage 87.2%
CDS Percentage 86.54%
Ka/Ks Ratio 0.12158 (Ka = 0.0666, Ks = 0.5478)

Atg2a ENSMUSG00000024773 (Mouse)

Gene Details

autophagy related 2A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046412, Mouse)

Protein Percentage 83.85%
CDS Percentage 82.94%
Ka/Ks Ratio 0.12722 (Ka = 0.0895, Ks = 0.7036)

Atg2a ENSRNOG00000021028 (Rat)

Gene Details

autophagy related 2A (Atg2a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028546, Rat)

Protein Percentage 84.18%
CDS Percentage 82.87%
Ka/Ks Ratio 0.12734 (Ka = 0.0892, Ks = 0.7005)

Genome Location

Sequence Coding sequence

Length: 5805 bp    Location: 21487898..21507971   Strand: +
Raw sequence   
>XM_004852450.1
ATGTCACGATGGTGTCTGTGGTCGAACTATGCGAAAGAGCGGGTGTGTCGCTACTTGCTGCACCGCTACTTGGGTCACTTCTTCCAGGAGCACCTCAGCCTGGACCAGCTCAGCCTGGATCTCTACAAGGGCTGCGTTACCCTGCGGGACATCCACTTGGAGATCTGGTCTGTGAACGAGATGCTGGAGTCAGTGGAGTCGCCGCTGGAGCTGGTGGAAGGCTTTGTGGGCTCCATCGAGGTGGCTGTGCCCTGGGCTAAGTTGCTCACCGAACATTGCACTATGCGTGTGTCGGGCCTCCAGCTCACCCTGCAGCCCCGCCAGTGCCCAGGGCCAGGGGCTGCTGACTCACAGACCTGGGCTTCATGTATGACCACAAGCCTGCAGCTGGCTCAGGAGTGTCTGGGTGATGGGCTGTCTGACCCCTCAGAGCCACCACAGCCCCTAGAGGGGCTGGAGATGTTCGCACAGACCATCGAGACTGTGCTGCGGACGATCAAGGTGACTTTGCTGGACACTGTCGTGAGGATAGAGCACTCGCCCAGAGACCGGGAGCATGGCATGGCCCTGGAGGTCCATGTGCAGAGACTGGAGTACTGTGATGAGGTGGTCCGGGACCCAAGCCAGGCACCCCAAGTGGATGTGCACCAGCCACCTGCCTTCTTGCACAAGCTGCTGCAGCTAGCAGGGGTCCGCCTGTACTTCGAGGAGCTCTCCCAACAGGCAGAACCACCAGAGCCCCCCTTGCAGATTGGCAGCTGTTCAGGGTACATGGAGCTGACGGTGAAGCTAAAGCAGAATGAGGCTTTCCCAGGCCCCAAGTTGGAGGTGGCAGGACAGCTGGGCTCCCTGCACCTGCTCCTGACCCCGAGGCAACTCCAGCAGCTTCTGGAACTTCTCAGTGCTGTCAGGCTTGCAGAACCAGAAGGCCTGGCTGACAAGTTGAACAAGAGCCGCCCACTAGGTGCTGAAGACCTGTGGCTGATTGAGCAGGATCTGAACCAGCAGCTGCAGGCTGGCGCTGTGGCTGAACCCCTCAGCCCAGACCCCCTTACTAACCCCCTTCTCAATGTGGACAGCACTGACCTCTTCTTCTCCATGGCTGGCCTCACAAGCAGTGTGACCTCAACTGTCTTGGAGTTACCTCTCTCTGACGTAGACATAGGGTCCTCTGTGCACAGCAACATAGCCTCCTGCCAGCTCTCTGCCCCGACCTGTGCAGCAGGAAAGGCGGCCCCTACTCCCTTTCTGGACAACATGCGCCCTGACTCGCTGCTGAAGATGACCTTGGGGGGCGTGACCTTGACCCTGCTCCAAACATGCACCCCATCTTCCGGACCACCTGACCTCTCCACCCACTTTTTTGCTGAGTTTGATGCCACCAAGGATGGGCCCTTCGGCTCCCGAGACTTCTACTACCTTCGGCCACGCTTCAAGAAGGCCTGTCCCTATAGCCATGTCCGGCTGACAGGCGCAGCCGTGCAGCTGTCATGGGAACTGCAGACTGGCAGTCGGGGCCGACGAGTGACCAGCACAGATGTGCACTTTGGGCAGCTGGAGGTGCTGGAGTGCCTGTGGCCCCAGGGCAGTTCAGAGCCTGAGTACACAGAGATTCTGAGTTTTCCCAGTAGCCTGGGCTCCCAGGCCTCAGCTCAGCCCTGCGCCCACCTGCGCCACATACAGACTCTGCGCCGCATGCTCAAGAGCCGGTCCCGGCGTTCTGTTGCCTGCCATTGCCACTCAGACCTGGCCCTGGACCTGGCTGACTTCCAAGCAGATGTGGAGCTGGGGGCCCTGGACCGACTCGTTACCCTGCTGCACCTTGCCACTACACCCCCCCAGCCTCCAGCCAGCCTGCTGACAGAGCCCCCGTTGGCCACTGAGCAGCAGACAGTGTTTCGGCTCTCAGCACCCCGGGCCACACTGAGGCTGCGCTTCCCCATTGCCGACCTGCGGCCTGAGCGAGACCCCTGGGCAGGAGGCCAAGCTGTGCGGGCCGAGCAGCTGCGGCTAGAGCTGAGTGAGCCCCAGTTCCGGTCAGAGCTCAGCAGTGGGCCTGGTCCCCCAGCCCCTACCCGCCTAGAACTCACTTGCTCTGACTTGCATGCAACCTATGAAGATGGAGAGAAGCCACCCATTCCCTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGGGCACTGGGCGCAAGTACTTTCTGCCCCAGATAGTGGTGACCCTGAACCCCCAGTCTGGCAGTGCACAGTGGGAGGCTGCCCCCGAGAAGGCAGAGGACCTGGAGCTGTCCACTGAGAGCCCGTGCGAGCTGCAGGAGCCTGAGCCCTCGCCTTTCTCCTCCAAGAGGACCATGTATGAAACAGAAGAGATGGTAATCCCTGGAGACCCCGAGGAGATGAGGACGTTCCAGCACCGGACCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGACCCTGCCCAGTGCCCATGTCTTCCTGCCCAGTAAAGAGATCTATGAGAGCATCTACAATAGGATCAATAATGACCTGCTCATGTGGGAGCCTGCAGACCTTTTCCCCACTCCCGGTCCTACTACCCGCCCGTCTGGCTTCTCCAGCTCCTCAGGCCTCTGGCACGACAGCTTCAAGATGTGCAAGTCAGCCTTCAAGCTGGGCCCCTCTGCCACTGGCCACCTTGATCTCGCCCCAGACTCAGACTCAGATGACGAGGATATCCACTTCTTCTCAGTGGGGGCATCAGGTGCCCCCCAGGCTCCTGCCCCTGAGCCCCCGAGCCACCAATCCCAGAGCACCTTCTCTACACTGGTAACGGTGCTAAAGGGCAGAATCACAGCTCTCTGTGGGGCTAAGGATGAGAGTGGGAAGCGGCTGGAGGGTGCACACGGTGAGATGGTGCTGGATGTGGAACATGGCACCCTCTTCAGTGTCTCCCAGTACCGTGGCCAGCTGGGCCTCGGCTACTTCTGCCTGGAAGCTGAGAAGGCGACACTCTACCACCGAGCAACCGTGGATGACTACATGATGCCCAGTCACCTGCATCTGCCCAGCTTTGCCCCCCCGGCCCACCTGGCCCCAACCATCTACCCGTCAGAGGAGGGGATGATTGAGCGGGGAGCCTCAGGCCGCAAGGGCCACGGCCACGGTGCCCCAATGCTGACTACTGCAGTGCGGATCCACTTGGACCCCCACAAGAATGTTAAGGAGTTCCTGGTGACACTACGGCTACACAAGGCCACGCTGCGCCACTACATGTCCCTGCCTGAACAGAGCTGGCACTCCCAGCTCTTGGAGTTCTTGGATGTGCTGGATGACCCTGTGCTGGGCTACCTGCCCCCGACAGTCATCACCGTCCTGCACACACACCTGTTCTCCTGTGCTGTGGACTATAGACCCCTCTACCTCCCAGTGCGTGTCCTCATTACTGCCGAGACCTTCACGCTCTCCAGCAACATTGTCATGGACACGTCAACCTTCTTGCTCAGGTTCATCCTCGATGACTCCGCTTTGTACCTGTCCGACAAGTGTGAGGTGGAGACCTTGGATCTGCAGCGAGATTATGTCTGTGTCCTGGACGTTGATCTCCTGGAGCTGGTGATCAAAACCTGGAAGGGGAGCACAGAGGGCAAACTGAGCCAGCCGCTGTTTGAGCTTCGCTGCTCCAACAACGTGGTGCATGTGCACAGCTGTGCCGACGCCTGTGCCCTACTGGCCAACCTGCTCCAGTACGTAACGAGTGCAGGCGACCTGCACCCCCCGCCCCGGCCCCCCAGCCCCACGGAGATCGCCGGCCAGAAGCTCTCTGAGAGCCCTGCCTCCTTGCCTTCCTGCCCCCCGGCGGAGACAGCCCTCATCAACCAGCGGGATCTGACCGACGCACTCCTGGACACAGAGCGCAGCCTGCGGGAGCTGACGCAGTCTTCAGGCGCCCCACTCCCTCAGGCCTCGCCCGTCTCTGTCTACCTGTTCCCCGGTGAAAGGAGTGGAGCCCAGCCCCCTTCTCCCCCTCCTGGGGGCCCTGCTGACAGCTTAGGGTCCTGCTCCGAGGCCACTGACGGTGACAAGGAAGAGGAGGGGGACGGAGACACTCTGGACAGTGATGAGTTCTGCATCCTGGACGCTCCTGGCCTGGGCATCCCGCCCCGAGACGGAGAGCCTGTGGTGACCCAGCTGCACCCAGGCCCCATCATCGTGCAGGACGGATACTTCTCCCGGCCACTGGGCAGCACAGACCTACTGCGGGCGCCTGCCCACTTCCCAGTACCCAGCAGTCGCGTGGTGCTACGTGAGGTCTCCCTGGTCTGGCACCTCTATGGAGGCCGAGACTTTGGCCCCCACCCAGGCCACAGAGCAAGAGTTGGCCTCACAGGTCCTAAGGGCTCCCCTTCCCGCTGCTCTGGCTCCAACCGGCCCCAGAACTCATGGCGAACACAGGGTGGCAGTGGGCGGCAGCACCAAGTCCTCATGGAGATCCACCTCAGCAAGGTGAGCTTCCAGCACGAGGTATACCCAGAGGAGCCAGCTGCTGACTCCACTCCAGGCCAGGAGGTGGAGGAGCGGCCACTGTCTCGCCAGGTGCTCATTGTGCAGGAGCTGGAGATCCGCGACCGGCTTGCCTCCTCCCAGATCAACAAGTTTCTGCACTTGCACACGAGTGAGCGGCTGCCGCGGCGCACCCACTCCAACATGCTCACCATCAAAGCTCTGCACGTAGCCCCCATCAGCAACCTGGGCGGCCCCGAGTGCTGTCTTCGCGTCTCGCTGATGCCTTTGCGGCTCAATGTGGACCAGGATGCCCTCTTTTTCCTCAAGGACTTCTTCAGCAGCCTGGTTGCTGGCATCAACCCAGTAGTCCCAGGGGAAACCTCTGAGGTTCACCCTGAGACCTGGGGCCCCCAGGAAGCACAGCCCAAGGGCCCAGAGATGAGTGACTTGAAGGAGGGCCCCAGTGGTGGACACAGCCCTGCTGAGCCCCAGCCCATCTACTTCAGGGAGTTCCGCTTCACGTCCGAGGTGCCCATCTGTCTGGATTACCACGGCAAGCACATCTCCATGGACCAGGTGGGCACCTTCGCAGGCCTCCTCATCGGCCTAGCCCAGCTCAACTGCTCCGAGTTGAAGCTAAAGCGGCTCTGTTGCCGACATGGGCTCCTAGGTGTGGACAAAGTGCTGGGCTATGCTCTCAATGAGTGGCTGCAGGACATTCGCAAGAACCAGCTGTCTGGCCTGCTGGGGGGCATCGGGCCCATGCACTCTGTCATCCAGCTCTTCCAAGGGTTTCGGGACCTGCTGTGGCTGCCCATCGAGCAGTACAGGAAGGACGGGCGCCTCATGCGGGGGCTGCAGCGTGGGGCCGCGTCCTTCGGCTCATCCACGGCCTCTGCTGCCCTGGAACTGAGCAACAGGCTGGTGCAGGCTATCCAGGCTACTGCTGAGACGGTTTATGACATCCTGTCCCCAGTGGCACCTGTGTCCCGCTCGCTGCAGGACAAGCGCTCTGCACGGAGGCTGCGCAAGGGCCAGCAGCCTGCTGACCTCCGAGAGGGCGTGGCCAAAGCCTACGATGCAGTGCGGGAGGGCATCCTGGACACAGCTCAGACCATCTGTGATGTGGCGTCGCGTGGTCATGAACAGAAGGGGCTGACGGGTGCTGTGGGGGGTGTGATCCGCCAGCTGCCCCCGACCGTGGTGAAGCCGCTCATTGTGGCCACTGAGGCCACATCCAATCTGCTTGGGGGGATGCGCAACCAGATCCTGCCTGATGCCCACAAGGACCATGCCCTCAAGTGGCGCTCGGAGGAGGCCCAGGACTGA

Related Sequences

XP_004852507.1 Protein

Atg2a PREDICTED: autophagy-related protein 2 homolog A isoform X5 [Heterocephalus glaber]

Length: 1934 aa      View alignments
>XP_004852507.1
MSRWCLWSNYAKERVCRYLLHRYLGHFFQEHLSLDQLSLDLYKGCVTLRDIHLEIWSVNEMLESVESPLELVEGFVGSIEVAVPWAKLLTEHCTMRVSGLQLTLQPRQCPGPGAADSQTWASCMTTSLQLAQECLGDGLSDPSEPPQPLEGLEMFAQTIETVLRTIKVTLLDTVVRIEHSPRDREHGMALEVHVQRLEYCDEVVRDPSQAPQVDVHQPPAFLHKLLQLAGVRLYFEELSQQAEPPEPPLQIGSCSGYMELTVKLKQNEAFPGPKLEVAGQLGSLHLLLTPRQLQQLLELLSAVRLAEPEGLADKLNKSRPLGAEDLWLIEQDLNQQLQAGAVAEPLSPDPLTNPLLNVDSTDLFFSMAGLTSSVTSTVLELPLSDVDIGSSVHSNIASCQLSAPTCAAGKAAPTPFLDNMRPDSLLKMTLGGVTLTLLQTCTPSSGPPDLSTHFFAEFDATKDGPFGSRDFYYLRPRFKKACPYSHVRLTGAAVQLSWELQTGSRGRRVTSTDVHFGQLEVLECLWPQGSSEPEYTEILSFPSSLGSQASAQPCAHLRHIQTLRRMLKSRSRRSVACHCHSDLALDLADFQADVELGALDRLVTLLHLATTPPQPPASLLTEPPLATEQQTVFRLSAPRATLRLRFPIADLRPERDPWAGGQAVRAEQLRLELSEPQFRSELSSGPGPPAPTRLELTCSDLHATYEDGEKPPIPCLRVSKALDPKGTGRKYFLPQIVVTLNPQSGSAQWEAAPEKAEDLELSTESPCELQEPEPSPFSSKRTMYETEEMVIPGDPEEMRTFQHRTLALSRCSLEVTLPSAHVFLPSKEIYESIYNRINNDLLMWEPADLFPTPGPTTRPSGFSSSSGLWHDSFKMCKSAFKLGPSATGHLDLAPDSDSDDEDIHFFSVGASGAPQAPAPEPPSHQSQSTFSTLVTVLKGRITALCGAKDESGKRLEGAHGEMVLDVEHGTLFSVSQYRGQLGLGYFCLEAEKATLYHRATVDDYMMPSHLHLPSFAPPAHLAPTIYPSEEGMIERGASGRKGHGHGAPMLTTAVRIHLDPHKNVKEFLVTLRLHKATLRHYMSLPEQSWHSQLLEFLDVLDDPVLGYLPPTVITVLHTHLFSCAVDYRPLYLPVRVLITAETFTLSSNIVMDTSTFLLRFILDDSALYLSDKCEVETLDLQRDYVCVLDVDLLELVIKTWKGSTEGKLSQPLFELRCSNNVVHVHSCADACALLANLLQYVTSAGDLHPPPRPPSPTEIAGQKLSESPASLPSCPPAETALINQRDLTDALLDTERSLRELTQSSGAPLPQASPVSVYLFPGERSGAQPPSPPPGGPADSLGSCSEATDGDKEEEGDGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLHPGPIIVQDGYFSRPLGSTDLLRAPAHFPVPSSRVVLREVSLVWHLYGGRDFGPHPGHRARVGLTGPKGSPSRCSGSNRPQNSWRTQGGSGRQHQVLMEIHLSKVSFQHEVYPEEPAADSTPGQEVEERPLSRQVLIVQELEIRDRLASSQINKFLHLHTSERLPRRTHSNMLTIKALHVAPISNLGGPECCLRVSLMPLRLNVDQDALFFLKDFFSSLVAGINPVVPGETSEVHPETWGPQEAQPKGPEMSDLKEGPSGGHSPAEPQPIYFREFRFTSEVPICLDYHGKHISMDQVGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLSGLLGGIGPMHSVIQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQATAETVYDILSPVAPVSRSLQDKRSARRLRKGQQPADLREGVAKAYDAVREGILDTAQTICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLIVATEATSNLLGGMRNQILPDAHKDHALKWRSEEAQD