Sequence details NCBI ID: XM_004852426.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vps51
Gene Name vacuolar protein sorting 51 homolog (S. cerevisiae), transcript variant X1
Entrez Gene ID 101700187

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS51 ENSCPOG00000021654 (Guinea pig)

Gene Details

vacuolar protein sorting 51 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016300, Guinea pig)

Protein Percentage 96.03%
CDS Percentage 92.15%
Ka/Ks Ratio 0.0512 (Ka = 0.0186, Ks = 0.3639)

VPS51 ENSG00000149823 (Human)

Gene Details

vacuolar protein sorting 51 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000279281, Human)

Protein Percentage 94.62%
CDS Percentage 88.35%
Ka/Ks Ratio 0.03261 (Ka = 0.0265, Ks = 0.8134)

Vps51 ENSMUSG00000024797 (Mouse)

Gene Details

vacuolar protein sorting 51 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000123994, Mouse)

Protein Percentage 95.39%
CDS Percentage 87.54%
Ka/Ks Ratio 0.03349 (Ka = 0.0239, Ks = 0.7132)

Vps51 ENSRNOG00000020996 (Rat)

Gene Details

Protein Vps51

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028495, Rat)

Protein Percentage 95.26%
CDS Percentage 87.65%
Ka/Ks Ratio 0.03525 (Ka = 0.0246, Ks = 0.6984)

Genome Location

Sequence Coding sequence

Length: 2346 bp    Location: 21307590..21291728   Strand: -
Raw sequence   
>XM_004852426.1
ATGGCGGCGGAAGCCGCCCGGCCTGGTCCAGCATTTGGACCTGGCGACTCCCCCGAAGGGCCCGAGGCTGATGCCCCGGAACGTCGGCGGAAGGCGCACGGGATGCTGAAGCTTTACTACGGTCTCTCGGAGGGGGAGGCTGGGGGGCGCCCCTCCGGGCCGGACCCTCTGGACCCGACTGATCTCAATGGGGCGCACTTCGACCCGGAAGTGTATCTGGACAAGCTGCGAAGGGAGTGCCCCCTGCCCCAGCTCATGGACAGCGAGACGGACATGGTGCGGCAGATCCGGGCTCTAGACAGCGACATGCAGACCCTGGTCTATGAAAACTACAACAAGTTCATTTCAGCCACAGACACCATCCGGAAGATGAAGAATGATTTCCGGAAGATGGAGGACGAGATGGACCGGCTGGCGACCAACATGGCTGTGATTACCGACTTCAGTGCACGCATTAGTGCCACGCTGCAAGACCACCATGAGCGCATCACAAAGTTGGCAGGGGTGCACGCTCTGTTGCGGAAGCTGCAGTTCCTCTTCGAGCTGCCCTCGCGCCTCACCAAGTGTGTGGAGCTGGGTGCCTACGGGCAAGCGGTGCGCTACCAGGGCCGAGCGCGGGCTGTGCTACAGCAGTACCAGCACCTGCCCTCCTTCCGCGCCATCCAGGATGACTGCCAGGTCATCACAGCCCGCCTTGCCCAGCAGCTGCGGCAGCGCTTCAGGGAGGGTGGCTCTGGAGCCCCCGAGCAGGCTGAATGTGTAGAGCTGCTGCTGGCACTGGGCGAACCTGCGGAGGAGCTGTGCGAGGAGTTCCTGGTGCACGCCAGGGGTCGGCTGGAGGAGGAGCTCAGCGCCCTGGAGAAGGAGCTGGGGCCCTCTCCCCCCGCTCCTGATGTGTTGGAGTTTACTGACCGAGGTGGCAGTGGCTTTGTGGGTGGTCTCTGCCAGGTGGCAGCAGCCTACCAAGAGCTGTTCGAAGCCCAGGGCCCCAGGGGTGGAGAGAAGCTGGCAGCCTTTGCCCAGGAGCTGGGCGGCTGCTACTTTGAGCTGGTGGAACGGCGGCTGGCACAGGAACAGGGTGGTGGTGACAACTCGCTACTCGTACGGGCACTGGATCGTTTCCACCGGCGCTTGCGAGCACCTGGGCCCCTGCTGGCTGCTGCTGGGCTCACCGAGTCAGCTACGGAGATTGTGGAGCGAGTGGCCCGGGAGCGCCTGGGTTACCACCTGCAGGGCCTGCAGACGGCTTTCCTGGGCTGTCTGACTGATGTGCGCCAGGCGCTTGCTGCCCCTCGCCTGGCTGGGAAGGAGGGGCCCAGCCTGGCCGAGTTGCTGGCCAGTGTGGCCAGCTCCATCCAGAGCCACATCAAGGCCTCTCTGGCTGCTGTTCATCTCTTCACTGCCAAGGAGGTGTCCTTCTCCAACAAACCCTACTTCCGGGGTGAGTTCTGCAGCCAAGGAGTCCGCGAGGGCCTCATTGTGGGCTTCATCCGTTCAATGTGCCAGACAGCCCAGAGCTTCTGTGACAGCGCAGGGGAGAAGGGGGGTGCCACACCACCTGCCCTCCTTCTGCTCCTCTCTCGCCTCTGCCTGGATTATGAGACCGCCACCATCTCCTATATCCTCACCCTCACTGATGAGCAGTTTCTGGTGCAGGACCAGTCTCCGGTGACACCTGTGAGTACACTGTGTGCAGAGGCCAGGGAGACTGCACGGCGGCTGCTGACCCACTACGTGAAAGTGCAGGGCCTGGTCATATCGCAGATGCTGCGAAAGAGCGTGGAGACACGGGACTGGCTCAGTACCCTTGAGCCCCGCAATGTGCGCGCTGTCATGAAGCGGGTGGTGGAGGACACCACAGCAATCGATGTGCAGGTGGGGCTCCTGTACGAAGAGGGTGTTCGCAAGGCCCAAAGCAGCGACTCCAGCAAGAGGACCTTCTCGGTGTACAGTAGTTCTCGGCAGCAGGGCCGCTATGCACCCAGCTACACACCCAGTGCCCCCATGGACACCAACCTTTTGAGCAATATCCAGAAGCTGTTCTCTGAACGCATTGATGTGTTCAGCCCCGTGGAGTTCAACAAGGTATCGGTGCTGACTGGCATCATTAAGATCAGCCTGAAGACCTTGCTGGAGTGCGTTCGGCTGCGCACTTTTGGGCGTTTCGGGCTACAGCAGGTGCAGGTGGACTGCCACTTCCTGCAGCTCTACTTGTGGCGCTTTGTGGCCGACGAGGAGCTTGTGCACCTGCTGCTGGACGAAGTGGTGGCCTCGGCAGCCCTGCGCTGTCCAGACCCAGTGCCCATGGAGCCCAGTGTCGTCGAGGTCATCTGCGAGCGCGGCTAG

Related Sequences

XP_004852483.1 Protein

Vps51 PREDICTED: vacuolar protein sorting-associated protein 51 homolog isoform X1 [Heterocephalus glaber]

Length: 781 aa      View alignments
>XP_004852483.1
MAAEAARPGPAFGPGDSPEGPEADAPERRRKAHGMLKLYYGLSEGEAGGRPSGPDPLDPTDLNGAHFDPEVYLDKLRRECPLPQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFRKMEDEMDRLATNMAVITDFSARISATLQDHHERITKLAGVHALLRKLQFLFELPSRLTKCVELGAYGQAVRYQGRARAVLQQYQHLPSFRAIQDDCQVITARLAQQLRQRFREGGSGAPEQAECVELLLALGEPAEELCEEFLVHARGRLEEELSALEKELGPSPPAPDVLEFTDRGGSGFVGGLCQVAAAYQELFEAQGPRGGEKLAAFAQELGGCYFELVERRLAQEQGGGDNSLLVRALDRFHRRLRAPGPLLAAAGLTESATEIVERVARERLGYHLQGLQTAFLGCLTDVRQALAAPRLAGKEGPSLAELLASVASSIQSHIKASLAAVHLFTAKEVSFSNKPYFRGEFCSQGVREGLIVGFIRSMCQTAQSFCDSAGEKGGATPPALLLLLSRLCLDYETATISYILTLTDEQFLVQDQSPVTPVSTLCAEARETARRLLTHYVKVQGLVISQMLRKSVETRDWLSTLEPRNVRAVMKRVVEDTTAIDVQVGLLYEEGVRKAQSSDSSKRTFSVYSSSRQQGRYAPSYTPSAPMDTNLLSNIQKLFSERIDVFSPVEFNKVSVLTGIIKISLKTLLECVRLRTFGRFGLQQVQVDCHFLQLYLWRFVADEELVHLLLDEVVASAALRCPDPVPMEPSVVEVICERG