Sequence details NCBI ID: XM_004852381.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rnaseh2c
Gene Name ribonuclease H2, subunit C, transcript variant X1
Entrez Gene ID 101716160

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNASEH2C ENSCPOG00000013696 (Guinea pig)

Gene Details

ribonuclease H2, subunit C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012334, Guinea pig)

Protein Percentage 64.78%
CDS Percentage 71.7%
Ka/Ks Ratio 0.34412 (Ka = 0.2915, Ks = 0.8472)

RNASEH2C ENSG00000172922 (Human)

Gene Details

ribonuclease H2, subunit C

External Links

Gene Match (Ensembl Protein ID: ENSP00000308193, Human)

Protein Percentage 51.22%
CDS Percentage 60.77%
Ka/Ks Ratio 0.04339 (Ka = 0.4407, Ks = 10.1551)

Rnaseh2c ENSMUSG00000024925 (Mouse)

Gene Details

ribonuclease H2, subunit C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025864, Mouse)

Protein Percentage 53.05%
CDS Percentage 63.01%
Ka/Ks Ratio 0.10824 (Ka = 0.3496, Ks = 3.23)

Rnaseh2c ENSRNOG00000020700 (Rat)

Gene Details

Protein Rnaseh2c; RCG47232

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028097, Rat)

Protein Percentage 52.44%
CDS Percentage 62.4%
Ka/Ks Ratio 0.15651 (Ka = 0.3649, Ks = 2.3315)

Genome Location

Sequence Coding sequence

Length: 504 bp    Location: 20667418..20668061   Strand: +
Raw sequence   
>XM_004852381.1
ATGGAGAGTGGCGACGAGTCCGCCATGGAAAAACAGCGAGTCCACGTGCGCCCCGCCACGCTGCACGACTCCTCCCCGGCCACGCTGCATCTTCTTCCCTGTGAGGTCCTGGCGAACCGGTTCGCCCCCGTAGGGCGTTTCTTCACGCCTGCCATCCGCCAAGGCGCAGACGGCCTCCACGTATCGTTTCGGGGGCGCAGTCTGCGGGGCGAGGAGGTGTCTGTGCCGCCCGGCCTCACAGGATACGTGATGGTGACCGAGAAGAGAGAGGGACTGATAGGGAAGCAGGACTTCAGAGGCTCTGAGAACAATGGCGAAGAAGCGCAGGAGCCGCTGGAGCGGGGTTTCGTGAGCAGAAGGATAGGGTTGGCTAGAGGGCGGGTGGGTGCGGCGGTCCCGACGCTGAGCCAGGCCCCTTCCCCAGGACCAGTTTATTGGAGCCACCGGCAGCTTCAGCTGCTTCACTGTGTGGGGCCTAGAAACTGTCCCTGGCCCGGAGGCTAA

Related Sequences

XP_004852438.1 Protein

Rnaseh2c PREDICTED: ribonuclease H2 subunit C isoform X1 [Heterocephalus glaber]

Length: 167 aa      View alignments
>XP_004852438.1
MESGDESAMEKQRVHVRPATLHDSSPATLHLLPCEVLANRFAPVGRFFTPAIRQGADGLHVSFRGRSLRGEEVSVPPGLTGYVMVTEKREGLIGKQDFRGSENNGEEAQEPLERGFVSRRIGLARGRVGAAVPTLSQAPSPGPVYWSHRQLQLLHCVGPRNCPWPGG