Sequence details NCBI ID: XM_004852376.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ap5b1
Gene Name adaptor-related protein complex 5, beta 1 subunit
Entrez Gene ID 101714752

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AP5B1 ENSCPOG00000011201 (Guinea pig)

Gene Details

adaptor-related protein complex 5, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010072, Guinea pig)

Protein Percentage 89.13%
CDS Percentage 89.31%
Ka/Ks Ratio 0.25614 (Ka = 0.0646, Ks = 0.2521)

AP5B1 ENSG00000254470 (Human)

Gene Details

adaptor-related protein complex 5, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000454303, Human)

Protein Percentage 82.4%
CDS Percentage 82.97%
Ka/Ks Ratio 0.21495 (Ka = 0.1124, Ks = 0.5227)

Ap5b1 ENSMUSG00000049562 (Mouse)

Gene Details

adaptor-related protein complex 5, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094042, Mouse)

Protein Percentage 78.49%
CDS Percentage 78.38%
Ka/Ks Ratio 0.19238 (Ka = 0.1441, Ks = 0.749)

Ap5b1 ENSRNOG00000026114 (Rat)

Gene Details

adaptor-related protein complex 5, beta 1 subunit (Ap5b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032524, Rat)

Protein Percentage 77.12%
CDS Percentage 78.11%
Ka/Ks Ratio 0.20241 (Ka = 0.1503, Ks = 0.7424)

Genome Location

Sequence Coding sequence

Length: 2628 bp    Location: 20644278..20647519   Strand: +
Raw sequence   
>XM_004852376.1
ATGGGGCCCCTGAGCCGCGAGGCTTGGGCCCAGCGCCTGGTGGCCTTCCGGACCAGCCCTTCCGCCTTCATGGCAGGTGCCGACGGTGAGGATTTGGGTCGCAACCTGCTGAATGACCTAAGGAGTGAGAAGCTGACCGAGCAAACTAAGGTTTCTTTGCTGTCCCTGAGCTTGGAATACCCAGCCGAGCTGTGGCCTGATCCTCCTGCAGCCGAAGCGGCCGCCACCTCCTTGTTGGATGCCTTGGTCCTCCTACCCCCACGGCCCTCAGCTCTCCGGAAGCCGCTGCTGCTGGCGGCCACCACCGTACTGGTGACAGGAGGTGTGCTGAGCCCCACCTCAGGAGCCTCCTGCCGGCTCCTTCCCCTGCTGCTAGGCCTCGCCTCCGGTCGAGATGTGGGTCGAGGCTTTGGCCCCATCTCAGAACAGCGGCCCCTGCAGGCCACAGCGTGCGAGTGCCTGCGAGAGCTGGAGAGCTGCAAGCCGGGGCTGCTGGGGGGCTTGCTGGGGCTGCTTCGGAGTCTGCTGGGGCAGGAGGGCCCCATCCAGCCCCTCAGCCTGTTGCTGGCACTTTCTCTGAGGGACACCTTGGTGATACAGTCCAGATCTGGGGTTGGCCTGCAGGGCCTGCTTGTGTCTGGGGTCTCCTCTGAGGGTGGTTCCTGGGACTGGACCCTAGCTGAAGAGGGTGCTGCCCACCTTCTGCCCCAGGCACCCAGCTGGCCCACCCCTAATGAGGGGGAGTGTGGCCTTGCAGTGCTGGAACCCAGTCCTGAGGAGGCCCGGGAGCTGAGGGCTGCTGTGGCCCAACTTCTGGACACCTCCTATCTGCTCACTCCCGTGGCCCAAGCCCAGCTTCTGTGGCTGCTGGGGTGGGCCCTTCGAGGTCTGCGGGGACAGCCACCGGCGCTTTTCAAGCCCCAGCTGGTACGTCTTCTGGGCACAGCACAGCTGACACTGCTGCATGCTGTTCTTGCTCTCAAAGCGGCCTTTGGGGAGGCACTATTCACGGCTCAGGACGAGGCCCTGTTGCTCCGCCGGCTCACTTTGGCTGCTCAGCATCCGTCCCTGCCCCTGCCTACCCACCTCTTTTACCTGCACTGCCTCCTGAGCTTCCCTGAGAATTGGCCACTGGGCCCCGAAGGAGAGGAGGCTGCCCCATTACTTCTGGGGCCCCAGCTATGCCGCAGCCTCATGCCCAGTCTCCTTCATGACCCCATGGCCCTGCTGGCCCGCCTGCATTTGCTGTGCCTGTTGTGTGCTGAAGAGGAGGAAGAGGACAAAGGCCAACTTCAGAGCCCACGGCAGTACCTGGAGGAGTTGCTGGCTGGCTTGCGACAGAGGGCAGCTCTGGATGGCAGTCCACGGGCCTTGGCTACTCTCTGCTTCCAGGCTTCATATCTGGTTGCCATCTGCCTGGTGGGGCAAACAAAAGTGCTAACACCCTTGATTCACGGGTTGGCCCAGCTGTACCGAGCTCGGCCTATGCTGGCCCCCCACCTTGTGGACTTCTTGGATCAGGTGAGCCCTGAGCTGGGGGAGCCCCTCAAGAGGGTGCTGCAACAGGAGGTGGTGTCCAGGCCTGGGAGGCCTGAAGCTCTTCGCTGGCATCTGCAAATGCTGGCAAAAGTGGCAGAGGGAGATGCTCAGAGTGCCATCCTCAGCTTTCTGCAGGCTGCTGCTGCCCACTGCACAGACTGGCGCCTGCAGCAGGCCCTGCTTCGGGTCTGCCGGGCTCTGTTGCAGGCAGGTGGAGGAAATGGCCTGACCCATCTGCTGCAGGTGCTGGCCAGGCAACTGGAGGACCCTGATGGGCGGGACCATGCCCGCCTCTACTACATCCTCCTGGCTCATCTGGCAGGGCCCAAGTTAGGGGTAGCCCTGGACCCCTCACTTGCAGCGCCTACACTGGCTTCTTCCCTGGTGGCTGAGAACCAGGGCTTTGCTGTGACACTGATAGTGCAGGAGACCCCGGCTCCCATTCGCCTGAGTGTGGGGCCCCGGATGCCCAAAGGCCCATTACCAGTCCTGCAGCTTCACATAGAGGCCCTGGAGCCCATCTACTCTCTGGAGCTACGCTTCCGTGTGGAAGGACAACTCTATGCACCCTTGGGGGCCATCCATGTCCCCTACCTGTGTCCTGGCCACCCTGCCCACTCTCTGTTCCTGCCCCTGCAGCCCCGACATCCAGCTCCCACACAGCTGGAGGTCCAGGCCCTTTACAGCACACCTGCTGGCCTCACATGCCATGCTCCCCTGCCACCCCTGTCTGTGAACTTCGAAGACCTCTTTTTGCCTTTCCCCCAGCCCCCTGATGGAGTGGAACAGGGCTTCTTTGAGGGGCTCTGGGACTCCTGCCTGCCAAAGGGTGCTGAGAGCCGTGTGTGGTGTCCACTCAAGTCACAAGGGCTGGAGACCTTAGTGTCCCGCCACCTGGAGCCCTTTGTGATAGTGGCTCAGGCCCCCAACAACTACCACATAGCCATTCGCCTGCCCCCGGCCTCCATGCTCCTGCTACGGCTGGAGGCCGCCCAGGTAGATGGGGTGCCTGTGGCCCTGCGGACCGATGACTGGGCCATACTGCCTCTGGCAGGGGACTATCTCCGAGGGCTGGCAGGAACTGAGTGA

Related Sequences

XP_004852433.1 Protein

Ap5b1 PREDICTED: AP-5 complex subunit beta-1 [Heterocephalus glaber]

Length: 875 aa      View alignments
>XP_004852433.1
MGPLSREAWAQRLVAFRTSPSAFMAGADGEDLGRNLLNDLRSEKLTEQTKVSLLSLSLEYPAELWPDPPAAEAAATSLLDALVLLPPRPSALRKPLLLAATTVLVTGGVLSPTSGASCRLLPLLLGLASGRDVGRGFGPISEQRPLQATACECLRELESCKPGLLGGLLGLLRSLLGQEGPIQPLSLLLALSLRDTLVIQSRSGVGLQGLLVSGVSSEGGSWDWTLAEEGAAHLLPQAPSWPTPNEGECGLAVLEPSPEEARELRAAVAQLLDTSYLLTPVAQAQLLWLLGWALRGLRGQPPALFKPQLVRLLGTAQLTLLHAVLALKAAFGEALFTAQDEALLLRRLTLAAQHPSLPLPTHLFYLHCLLSFPENWPLGPEGEEAAPLLLGPQLCRSLMPSLLHDPMALLARLHLLCLLCAEEEEEDKGQLQSPRQYLEELLAGLRQRAALDGSPRALATLCFQASYLVAICLVGQTKVLTPLIHGLAQLYRARPMLAPHLVDFLDQVSPELGEPLKRVLQQEVVSRPGRPEALRWHLQMLAKVAEGDAQSAILSFLQAAAAHCTDWRLQQALLRVCRALLQAGGGNGLTHLLQVLARQLEDPDGRDHARLYYILLAHLAGPKLGVALDPSLAAPTLASSLVAENQGFAVTLIVQETPAPIRLSVGPRMPKGPLPVLQLHIEALEPIYSLELRFRVEGQLYAPLGAIHVPYLCPGHPAHSLFLPLQPRHPAPTQLEVQALYSTPAGLTCHAPLPPLSVNFEDLFLPFPQPPDGVEQGFFEGLWDSCLPKGAESRVWCPLKSQGLETLVSRHLEPFVIVAQAPNNYHIAIRLPPASMLLLRLEAAQVDGVPVALRTDDWAILPLAGDYLRGLAGTE