Details from NCBI annotation

Gene Symbol Ctsw
Gene Name cathepsin W, transcript variant X4
Entrez Gene ID 101708790

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTSW ENSCPOG00000002974 (Guinea pig)

Gene Details

cathepsin W

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002701, Guinea pig)

Protein Percentage 72.17%
CDS Percentage 80.68%
Ka/Ks Ratio 0.44545 (Ka = 0.185, Ks = 0.4154)

CTSW ENSG00000172543 (Human)

Gene Details

cathepsin W

External Links

Gene Match (Ensembl Protein ID: ENSP00000311300, Human)

Protein Percentage 65.89%
CDS Percentage 74.73%
Ka/Ks Ratio 0.3541 (Ka = 0.2451, Ks = 0.6921)

Ctsw ENSMUSG00000024910 (Mouse)

Gene Details

cathepsin W

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025844, Mouse)

Protein Percentage 63.16%
CDS Percentage 70.66%
Ka/Ks Ratio 0.3417 (Ka = 0.2936, Ks = 0.8592)

Ctsw ENSRNOG00000027096 (Rat)

Gene Details

cathepsin W (Ctsw), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035535, Rat)

Protein Percentage 62.87%
CDS Percentage 71.54%
Ka/Ks Ratio 0.41018 (Ka = 0.2961, Ks = 0.722)

Genome Location

Sequence Coding sequence

Length: 1158 bp    Location: 20538436..20533142   Strand: -
>XM_004852358.1
ATGGCTCTGAATGCCCACCTTTCTGGCCTCCTGATCCTGTTGGTGACAGGCCTAGCCCCAGGCATCAGGGACTCCCTCAGGGCCCAGGACCCAGGTCCCCGGCCACTAGAGCTAAAAGAAGTCTTCAAGTTGTTCCAGATCCAGTTTAACAAGAGTTACTCGAACCCAGCAGAGCATGCACGCCGCCTAGACATCTTTGTCCACAACCTGGCCATGGCTCAGAGGCTGCAAGAGGAGGACTTGGGGACTGCTGAGTTTGGAGTGACTCCATTCAGTGACCTCACAGAGGAAGAGTTTGGCCAGCTCTATGGGAATTGGAGAGCAGCCAAGAAGGACCTCAGGGTGGGCAGAAAGGGAAAGTGCAATTGCTGCTGGGCCATAGCAGCAGCAGGCAACATTGAAGCTTTGTGGAACATCAGATTCAAACAGTCCGTGGAAGTCTCTGTGCAAGAGCTGCTTGACTGTGGTCGCTGTGGGGATGGCTGCTTGGGTGGCTACGTCTGGGATGCGTTCATAACTGTCCTCAACTACAGTGAGTACCTGGCTTTGTTGGACAACTGTAGGAGTCGGGAACATCCAGGAACAGAGTGTCCTTCCTTATCTCCAGGTGGTCTGGCCAGTGAAAAGGACTACCGATTCCGGGGGCGTGCCAACATCCACAGGTGCCTGGCACCGTTCTACAAGAAGGTGGCCTGGATCCAAGACTACGTCATGCTGCCCCGCAATGAACACACAATGGCCAGGTACGTGGCCACACAGGGCCCTATCACTGTGCTCATCAACCAGATGCTATTGCAGCATTACCGGCAGGGTATAATCAGGGCCACGCCCTCCACCTGTGACCCCTGGCTTGTGAACCATTATGTCCTGCTGGTGGGTTTTGGCAAAGAGGAGGAGAAGAAAGGGTCAGAGAAAGATCTGTCCCAGTCCAATCATCTTCCTCGCCATTCCACCCCCTATTGGATCCTGAAGAACTCTTGGGGGGCCCACTGGGGTGAGCAGGTGAGCAGGTCCACTGGCAGAAGGGACAGGGCAGAACAGGCCCTTCCCCACCTTCTGGGCCTGATGTCCCCTAACTTCCTAGGGCTACTTTCGGTTGCACCAAGGGAGCAACACCTGCGGCATCACCAGGTCCCCACTCACAGCCTGTATAGGTGA

Related Sequences

XP_004852415.1 Protein

Ctsw PREDICTED: cathepsin W isoform X4 [Heterocephalus glaber]

Length: 385 aa      View alignments
>XP_004852415.1
MALNAHLSGLLILLVTGLAPGIRDSLRAQDPGPRPLELKEVFKLFQIQFNKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYGNWRAAKKDLRVGRKGKCNCCWAIAAAGNIEALWNIRFKQSVEVSVQELLDCGRCGDGCLGGYVWDAFITVLNYSEYLALLDNCRSREHPGTECPSLSPGGLASEKDYRFRGRANIHRCLAPFYKKVAWIQDYVMLPRNEHTMARYVATQGPITVLINQMLLQHYRQGIIRATPSTCDPWLVNHYVLLVGFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKNSWGAHWGEQVSRSTGRRDRAEQALPHLLGLMSPNFLGLLSVAPREQHLRHHQVPTHSLYR