Details from NCBI annotation

Gene Symbol Banf1
Gene Name barrier to autointegration factor 1, transcript variant X2
Entrez Gene ID 101705921

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BANF1 ENSCPOG00000007490 (Guinea pig)

Gene Details

barrier to autointegration factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006758, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 98.13%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1078)

BANF1 ENSG00000175334 (Human)

Gene Details

barrier to autointegration factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000310275, Human)

Protein Percentage 100.0%
CDS Percentage 92.88%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3558)

Banf1 ENSMUSG00000024844 (Mouse)

Gene Details

barrier to autointegration factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126202, Mouse)

Protein Percentage 96.63%
CDS Percentage 92.88%
Ka/Ks Ratio 0.05975 (Ka = 0.0159, Ks = 0.2663)

Banf1 ENSRNOG00000020460 (Rat)

Gene Details

barrier to autointegration factor 1 (Banf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027734, Rat)

Protein Percentage 96.63%
CDS Percentage 91.39%
Ka/Ks Ratio 0.04573 (Ka = 0.016, Ks = 0.3509)

Genome Location

Sequence Coding sequence

Length: 270 bp    Location: 20436364..20435246   Strand: -
>XM_004852349.1
ATGACAACGTCCCAAAAGCACCGAGACTTCGTGGCAGAGCCCATGGGGGAAAAGCCAGTGGGGAGCCTGGCTGGTATTGGTGAAGTCCTGGGCAAGAAGTTGGAAGAAAGAGGCTTTGACAAGGCCTATGTGGTCCTTGGCCAATTTCTGGTGCTAAAGAAAGATGAAGACCTCTTCCGGGAATGGCTGAAGGACACGTGTGGTGCCAACGCCAAGCAGTCACGGGACTGCTTTGGGTGCCTCCGGGAGTGGTGTGATGCCTTCTTGTGA

Related Sequences

XP_004852406.1 Protein

Banf1 PREDICTED: barrier-to-autointegration factor isoform X2 [Heterocephalus glaber]

Length: 89 aa      View alignments
>XP_004852406.1
MTTSQKHRDFVAEPMGEKPVGSLAGIGEVLGKKLEERGFDKAYVVLGQFLVLKKDEDLFREWLKDTCGANAKQSRDCFGCLREWCDAFL