Sequence details NCBI ID: XM_004852306.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Npas4
Gene Name neuronal PAS domain protein 4
Entrez Gene ID 101723720

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NPAS4 ENSCPOG00000000685 (Guinea pig)

Gene Details

neuronal PAS domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000607, Guinea pig)

Protein Percentage 94.76%
CDS Percentage 93.89%
Ka/Ks Ratio 0.16988 (Ka = 0.0271, Ks = 0.1593)

NPAS4 ENSG00000174576 (Human)

Gene Details

neuronal PAS domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000311196, Human)

Protein Percentage 93.63%
CDS Percentage 91.75%
Ka/Ks Ratio 0.13546 (Ka = 0.0331, Ks = 0.2446)

Npas4 ENSMUSG00000045903 (Mouse)

Gene Details

neuronal PAS domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062992, Mouse)

Protein Percentage 91.27%
CDS Percentage 89.69%
Ka/Ks Ratio 0.14362 (Ka = 0.0451, Ks = 0.3138)

Npas4 ENSRNOG00000020009 (Rat)

Gene Details

neuronal PAS domain protein 4 (Npas4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027119, Rat)

Protein Percentage 91.65%
CDS Percentage 89.53%
Ka/Ks Ratio 0.13364 (Ka = 0.0434, Ks = 0.3248)

Genome Location

Sequence Coding sequence

Length: 2409 bp    Location: 19959360..19954323   Strand: -
Raw sequence   
>XM_004852306.1
ATGTACCGCTCCACCAAGGGCGCCTCGAAGGCGCGCCGAGACCAGATCAACGCCGAGATCCGGAACCTCAAGGAGCTGCTGCCGCTGGCTGAAGCCGACAAGGTCCGGCTGTCCTACCTCCACATTATGAGTCTTGCCTGCATCTACACTCGCAAAGGTGTCTTCTTCGCTGGAGGCACCCCTCTGGCAGGTCCTACAGGGCTTCTTTCAGCTCAAGAACTGGAAGATATCGTGGCAGCGCTGCCTGGATTTCTGCTTGTATTCACAGCTGAAGGGAAGTTGCTGTACCTGTCTGAGAGTGTTAGCGAGCATCTTGGCCACTCCATGGTGGACCTGGTTGCCCAGGGTGACAGTATCTACGACATTATTGACCCAGCTGACCACCTCACTGTGCGCCAGCAGCTCACCCTGCCCTCTGCTCTGGACACTGACCGCCTTTTCCGTTGTCGCTTCAACACCTCCAAGTCTCTCCGGCGCCAGAGTGCAGGCAACAAACTGGTGCTTATTCGAGGCCGATTCCATGCCCACCCACCCGGAGCCTACTGGGCAGGAAACCCTGTGTTCACAGCTTTCTGTGCCCCTCTGGAGCCAAGACCCCGCCCTGGGCCTGGCCCTGGCCCTGGCCCTGGCCCTGCCTCACTCTTCCTGGCCATGTTCCAGAGCCGTCATGCTAAAGACCTGGCCCTACTGGACATCTCTGAGAGTGTCCTAATCTACCTGGGCTTTGAGCGCAGTGAACTGCTCTGTAAATCATGGTATGGACTGCTGCACCCTGAGGACCTGGCCCACGCTTCTGCTCAACACTACCGCCTGTTGGCTGAGAGCGGAGATATTCAGGCAGAGATGGTAGTGAGACTGCAGTCCAAGCGTGGAAGCTGGGCATGGATTTACTGCCTGTTATACTCAGAAGGTCCAGAGGGCCCTATTACTGCCAATAACTACCCAATCAGTGACATGGAAGCCTGGAGCCTCCGCCAGCAGCTGAACTCTGAAGACACCCAGGCAGCATATGTCCTAGGCAACCCAACTGTGCTGCCCTCATTCCCTGAGACTGTCCTCTCTCAGGAACAGTGCTCTAATCCACTTTTTACCCCAGCCCTTGGGGCTGCCAGGAGCACCAGTTTCTCCAGTGCTCCTCAACTGGGTGTTGTGTCAACATCAGAAGAGATTCCTCAACCCCTCAAAGAACTGGACTTCAGTTATCTGCCATTTCCTTCTGGGCCTGAGCCTTCTCTCCAAGCTGACCTAAGCAAGGATCTTGTGTGCACCCCACCCTACACGCCACACAAGCCAGGAGGCTGCACCTTCCTTTTCAGCCTCCATGAGCCCTTCCAGACCCACTTGCCCATCCCATCCAGCTCTTTCCAAGAACAGCTGACTCCAAGCACTGCAACCTTCTCTGATCAGTTGACGCCCAGCAGTGCAACTTTCCCAGATCCACTAACCAGTCCATTGCAAGGCCAGTTGACTGAAATCTCAGCCAGAAACTATGAAGACCAACTGACTCCCTGCACCTCCACCTTCTCAGACCAGCTGCTTCCCAGCACTACTCCTTTCCCAGAGTCTCTGGGCAGCCCTACCCAAGAACAGCTGACTCCTCCCACCACAGCATTCCAAGCGCACCTGAACAGCCCCAGCCAAACTTTCCCAGAACAACTGAGCCCCAATTCTACCAAGACTTACTTTGCACAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGTCCTAGCAGTCCTGGTAATGGGGACTGCACACTCCTGGCCCTTGCCCAGCTCCGGGGTCCCCTCTCTGTGGATGTCCCCCTGGTACCTGAAGGTCTGCTCACACCTGAGGCCTCTCCAGTCAAGCAGAGTTTCTTCCATTACTCTGAGAAGGAGCAAAATGAGATAGACCGTCTCATCCAGCAGATTAGCCAGTTGGCTCAGGGCATGGACAGGCCCTTCTCAGCTGAGGCTGGTACTGGAGGACTGGAGTCACTTGGAGGGCTGGAGCCCCTGGATTCCAACCTGTCCTTGCCAGGGGCTGGCCCCCCTGTGCTCAGCCTGGACCTAAAACCCTGGAAATGCCAGGAGCTGGACTTTCTGGCTAACCCTGATACCATATTCCCAGAAGAGACAACCGTGGAAGACATCTTCATGGATCTCTCTACTCCAGACCCCAATGGGGAATGGGGTTCAGGGGATCCTGAGGCAGAGGGCCCAAGAGGGGCCTCATCTCATTGCAACAACCTGTCTCCAGAAGACCACAGCTTTCTGGAGGACCTGGCCACCTATGAAACCGCCTTTGAGACAAGTGTCTCAACATTCCCCTACGATGGGTTTCCTGATGAGTTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTCCATGAAGATGGAAGTGGAGGGGAACCAACGTTTTGA

Related Sequences

XP_004852363.1 Protein

Npas4 PREDICTED: neuronal PAS domain-containing protein 4 [Heterocephalus glaber]

Length: 802 aa      View alignments
>XP_004852363.1
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTLPSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQSKRGSWAWIYCLLYSEGPEGPITANNYPISDMEAWSLRQQLNSEDTQAAYVLGNPTVLPSFPETVLSQEQCSNPLFTPALGAARSTSFSSAPQLGVVSTSEEIPQPLKELDFSYLPFPSGPEPSLQADLSKDLVCTPPYTPHKPGGCTFLFSLHEPFQTHLPIPSSSFQEQLTPSTATFSDQLTPSSATFPDPLTSPLQGQLTEISARNYEDQLTPCTSTFSDQLLPSTTPFPESLGSPTQEQLTPPTTAFQAHLNSPSQTFPEQLSPNSTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTGGLESLGGLEPLDSNLSLPGAGPPVLSLDLKPWKCQELDFLANPDTIFPEETTVEDIFMDLSTPDPNGEWGSGDPEAEGPRGASSHCNNLSPEDHSFLEDLATYETAFETSVSTFPYDGFPDELHQLQSQVQDSFHEDGSGGEPTF