Details from NCBI annotation

Gene Symbol Clcf1
Gene Name cardiotrophin-like cytokine factor 1, transcript variant X1
Entrez Gene ID 101706033

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLCF1 ENSCPOG00000000439 (Guinea pig)

Gene Details

cardiotrophin-like cytokine factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018534, Guinea pig)

Protein Percentage 96.89%
CDS Percentage 95.11%
Ka/Ks Ratio 0.0895 (Ka = 0.0146, Ks = 0.1634)

CLCF1 ENSG00000175505 (Human)

Gene Details

cardiotrophin-like cytokine factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000309338, Human)

Protein Percentage 97.78%
CDS Percentage 92.89%
Ka/Ks Ratio 0.03189 (Ka = 0.0102, Ks = 0.3206)

Clcf1 ENSMUSG00000040663 (Mouse)

Gene Details

cardiotrophin-like cytokine factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045562, Mouse)

Protein Percentage 97.33%
CDS Percentage 91.56%
Ka/Ks Ratio 0.03424 (Ka = 0.0125, Ks = 0.3657)

Clcf1 ENSRNOG00000018752 (Rat)

Gene Details

cardiotrophin-like cytokine factor 1 (Clcf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025343, Rat)

Protein Percentage 92.41%
CDS Percentage 87.35%
Ka/Ks Ratio 0.11958 (Ka = 0.0535, Ks = 0.4474)

Genome Location

Sequence Coding sequence

Length: 678 bp    Location: 19143019..19152572   Strand: +
>XM_004852247.1
ATGGACCTCCGAGCAGGGGACTCGTGGGGGATGTTAGCTTGCCTGTGCACGGTGCTCTGGCACCTCCCCGCAGTGCCAGCTCTCAATCGCACAGGGGACCCAGGGCCTGGCCCCTCCATCCAGAAAACTTATGACCTCACCCGCTACCTGGAGCATCAACTCCGAAGCTTGGCTGGGACCTACCTGAACTACCTGGGGCCTCCTTTCAATGAGCCTGACTTCAATCCACCTCGGCTGGGGGCAGAGACACTGCCCAGGGCCACTGTCAACTTGGAAGTGTGGCGAAGTCTCAATGACAAATTACGGCTGACTCAGAACTATGAGGCCTACAGCCACCTCCTGTGTTATTTGCGTGGCCTCAACCGTCAGGCTGCCACCGCAGAGCTGCGCCACAGCCTGGCCCACTTCTGCACCAGCCTCCAGGGCCTCTTGGGAAGCATCGCAGGAGTCATGGCAGCTCTGGGCTACCCACTGCCCCAGCCTCTGCCAGGGATTGAACCCACTTGGGCCCCTGGCCCTGCCCACAGCGACTTCCTCCAGAAGATGGATGACTTCTGGCTGCTGAAGGAGCTGCAGACCTGGCTGTGGCGCTCAGCCAAGGACTTCAACAGGCTTAAGAAGAAAATGCAGCCTCCAGCAGCTGCAGTCACCCTACACCTGGAGGCCCATGGCTTCTGA

Related Sequences

XP_004852304.1 Protein

Clcf1 PREDICTED: cardiotrophin-like cytokine factor 1 isoform X1 [Heterocephalus glaber]

Length: 225 aa      View alignments
>XP_004852304.1
MDLRAGDSWGMLACLCTVLWHLPAVPALNRTGDPGPGPSIQKTYDLTRYLEHQLRSLAGTYLNYLGPPFNEPDFNPPRLGAETLPRATVNLEVWRSLNDKLRLTQNYEAYSHLLCYLRGLNRQAATAELRHSLAHFCTSLQGLLGSIAGVMAALGYPLPQPLPGIEPTWAPGPAHSDFLQKMDDFWLLKELQTWLWRSAKDFNRLKKKMQPPAAAVTLHLEAHGF