Sequence details NCBI ID: XM_004852236.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cabp4
Gene Name calcium binding protein 4
Entrez Gene ID 101702208

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CABP4 ENSCPOG00000007807 (Guinea pig)

Gene Details

calcium binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007031, Guinea pig)

Protein Percentage 83.03%
CDS Percentage 85.61%
Ka/Ks Ratio 0.22506 (Ka = 0.0988, Ks = 0.4391)

CABP4 ENSG00000175544 (Human)

Gene Details

calcium binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000324960, Human)

Protein Percentage 75.46%
CDS Percentage 80.34%
Ka/Ks Ratio 0.18812 (Ka = 0.1471, Ks = 0.782)

Cabp4 ENSMUSG00000024842 (Mouse)

Gene Details

calcium binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025761, Mouse)

Protein Percentage 77.12%
CDS Percentage 81.18%
Ka/Ks Ratio 0.21397 (Ka = 0.1355, Ks = 0.6332)

Cabp4 ENSRNOG00000022044 (Rat)

Gene Details

calcium binding protein 4 (Cabp4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001550, Rat)

Protein Percentage 75.65%
CDS Percentage 79.34%
Ka/Ks Ratio 0.19037 (Ka = 0.1441, Ks = 0.7567)

Genome Location

Sequence Coding sequence

Length: 831 bp    Location: 19082130..19070157   Strand: -
Raw sequence   
>XM_004852236.1
ATGACAGAGGAGCGGAGCCGGGGGCAACAGGAGCCCAGCCTGTTGTTAGGCTCCCAGAAGCCCCCTGCAGAGGTGGTGACTCCAGGTAGTGGTGCTGAGGGGCGCCCTTTTAGCAGGAGGAAGAGCAAGAGGGAAAAGTGGCTTCGAGGGTCCCGGAAGGGCAACTCTGGGGAGCAAACCCCTGTCCAGGACCCCGAGGCCGCAGGGAGCAGCAAACACCCTTCAAGGACCAAACAGAGCAAAGGGAAGCCATCTCCAGTCCCACCTGGGCCAGCCTCTCTCCGCCAGTCCCACCGGCGTTGTTCTGACCCCCAGCAGGATGCTACTCAAAGGGCCTATGGGACCCTGCTCAACCGCATGTTTGGGAAGGACCGTGAATTGGGGCCTGAGGAGCTGGAGGAGCTGCAGGCTGCCTTTGAGGAGTTTGACACTGACCAGGACGGCTACATCAGCTACCGGGAGCTGGGCACCTGCATGCGGACGCTGGGCTACATGCCCACCGAGATGGAGCTCCTGGAGGTCTCGCAGCATGTGAAGATGCGTATGGGTGGCTTTGTAGACTTCGAGGAGTTCGTGGAGCTGATAGGCCCAAAGCTGAGGGAGGAGACAGCACACATGCTGGGGGTACGGGAGCTGCACATCGCCTTCCGAGAGTTTGACAGGGACCAGGATGGACGAATCACAGTGGCAGAGCTGCAGCAGGGAGCACCAGCTCTCCTGGGGGAACCACTGGAGGTCACTGAGCTGGACGAGATGCTCCGAGACATAGACCTCAATGGGGATGGCACCATAGACTTTGACGAGTTTGTGATGATGTTGTCCACCCACTGA

Related Sequences

XP_004852293.1 Protein

Cabp4 PREDICTED: calcium-binding protein 4 [Heterocephalus glaber]

Length: 276 aa      View alignments
>XP_004852293.1
MTEERSRGQQEPSLLLGSQKPPAEVVTPGSGAEGRPFSRRKSKREKWLRGSRKGNSGEQTPVQDPEAAGSSKHPSRTKQSKGKPSPVPPGPASLRQSHRRCSDPQQDATQRAYGTLLNRMFGKDRELGPEELEELQAAFEEFDTDQDGYISYRELGTCMRTLGYMPTEMELLEVSQHVKMRMGGFVDFEEFVELIGPKLREETAHMLGVRELHIAFREFDRDQDGRITVAELQQGAPALLGEPLEVTELDEMLRDIDLNGDGTIDFDEFVMMLSTH