Details from NCBI annotation

Gene Symbol Tcirg1
Gene Name T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, transcript variant X4
Entrez Gene ID 101720677

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TCIRG1 ENSCPOG00000001417 (Guinea pig)

Gene Details

T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001281, Guinea pig)

Protein Percentage 91.56%
CDS Percentage 90.95%
Ka/Ks Ratio 0.11916 (Ka = 0.0438, Ks = 0.3675)

TCIRG1 ENSG00000110719 (Human)

Gene Details

T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3

External Links

Gene Match (Ensembl Protein ID: ENSP00000265686, Human)

Protein Percentage 85.65%
CDS Percentage 85.69%
Ka/Ks Ratio 0.08122 (Ka = 0.0713, Ks = 0.8775)

Tcirg1 ENSMUSG00000001750 (Mouse)

Gene Details

T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000120531, Mouse)

Protein Percentage 85.18%
CDS Percentage 83.98%
Ka/Ks Ratio 0.10289 (Ka = 0.0825, Ks = 0.8022)

Tcirg1 ENSRNOG00000017220 (Rat)

Gene Details

T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (Tcirg1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023425, Rat)

Protein Percentage 85.18%
CDS Percentage 84.02%
Ka/Ks Ratio 0.10264 (Ka = 0.081, Ks = 0.789)

Genome Location

Sequence Coding sequence

Length: 2496 bp    Location: 18820341..18809626   Strand: -
>XM_004852201.1
ATGGGCTCCATGTTCCGTGGTGAGGAGGTGGCCCTGGTGCAGCTCTTCCTGCCTACAGCAGCCGCCTATACCTGTGTGAGCCAGCTGGGTGAGCTGGGCCTCGTGGAGTTCAGAGATCTCAATGCATCTGTGAGCGCCTTCCAGAGACGCTTTGTGGTGGATGTCCGGCGCTGTGAGGAGCTGGAGAAGACCTTCACCTTCCTGCAGGAGGAAGTGAGGCGAGCTGGCCTGGTGCTGCCTCAGCCCGAGGGAAGGCTGCCTGCGCCCCCACCTCGTGACCTGCTGCACATCCAGGAGGAGACAGATCGCTTGGCAAAGGAGCTGCGCGATGTTCGGGGCAATCAGCAGGAGCTGCGGGCCCAGCTACATCAGCTACAGCTCCATGAGGCTGTGCTGGGCCAGAGCCACGGCCCCCCGGCAGCTGCCCACATTGATGGCCCCTCCTCGGAGAGAAGCCCCCTGCTGCTGTCCCCTGCGGGGCCACACCAGGACCTGAGGGTCAACTTTGTGGCAGGTGCCGTGGAGCCCCACAAGGCCGCTGCCCTGGAGCGCCTTCTCTGGAGGGCCTGTCGCGGCTTCCTCATTGCCAGCTTCCAGGAGATGGAACAGCAGCTGGAGGACCCCATGACTGGTGAGCCTACGAGGTGGATGACCTTCCTCATCTCCTACTGGGGTGAGCAGATTGGACAGAAGATCCACAAGATCACAGCATGCTTCCATTGCCACGTCTTCCCATACCTGGAGCAGGAGGAGGCCCGGCGGGGGGTCCTGCAGCAGCTTCAGCAGCAGAGCCAGGAGCTGCAGGAGGTCCTGGGGGAGACTGAACGGTTCCTGAGCCAGGTACTGGGCCGGGTGCAGCAGCTGTTGCCAGCAGGACAGGTGCAGATCCGCAAGATGAAGGCTGTGTATCTGGCCCTCAACCAGTGCAGCGTGAGCTCCACACACAAGTGCCTCATCGCCGAGGCCTGGTGTGCTGCACTCGACCTGCCCACTGTGCAGCAGGTGCTGCGGGACAGCTCGAGCGAGGCAGGAGTGAGTGCCGTGGCTCACCGCATCCCATGCCAGGACATGCCCCCGACTCTCATCCGTACCAACCGCTTCACTGTCAGCTTCCAGGGGATTGTGGATGCCTATGGTGTGGGCCGCTACCAGGAGGTCAACCCTGCACCCTACACCATCATCACCTTCCCCTTCCTCTTCGCGGTAATGTTTGGCGACGTGGGCCACGGGCTGCTTATGTTCCTCTTCGCCCTGGCCATGGTGCTTGCAGAGAACCAACCGGCCATGAAGGCTGCACAGAATGAGATCTGGCAGACCTTCTTTGGGGGCCGCTATCTGCTCCTGCTCATGGGCCTGTTCTCTGTGTACACCGGCTTCATCTACAACGAGTGCTTCAGCCGAGCCACTACCATCTTCCCCTCGGGGTGGAGCGTGGCCACCATGGCCAACCAGTCTGGCTGGAGTGATGCGTACCTGGCCCAGCACCCACTGCTCACCTTGGACCCTAATATCTCTGGCGTCTTCCTGGGACCCTACCCCTTTGGCATCGACCCGATCTGGAGCCTGGCCACCAACCACCTGAGCTTCCTCAATTCCTTCAAGATGAAGATGTCTGTCATCCTGGGTGTCACCCACATGGCCTTCGGGGTGGTCCTGGGAATCTTCAACCACGTGCACTTTGGCCAGGGCCACCGGCTGCTGCTGGAGACGTTGCCCGAGCTCATCTTCCTGCTGGGCCTCTTCGGCTACCTCGTCTTCCTGGTCGTCTACAAGTGGCTGTGCATCTCGGCTGGTGGCTCTGCCTTGGCCCCCAGTATCCTCATCCACTTCATCAACATGTTCCTCTTCTCCCGTAGCCCCACCAACCGGCTGCTCTACCATGGGCAGGAAGTGGTACAGTATGCACTGGTGGTCCTGGCCTTGGCCGCGGTGCCTGTCTTGCTGCTGGGCACACCTTTGTACCTGCTGCGCCAGCAGCGCAGCCACCGTCTGCAGAGAAGGCCTGCAGGTGGACAGGACAAGGACAAGGCCAAACTTATAGACATTACTGATGCCTCTGAGAGTGGCTGGGGTCCTGACGAGGAGAAGGCAGGGTGCTCTGGGGACAAAAAGGAAGCTGAGCTTGTCCCCTCTGAGGTCTTCATGCACCAGGCCATCCACACCATCGAATTCTGCCTTGGCTGCATCTCCAACACGGCCTCCTACCTGCGCCTCTGGGCCCTGAGCCTGGCCCATGCCCAGCTGTCAGAGGTCCTGTGGGCCATGGTGATGCGCATGGGCCTGAGTGCAGGCCTAAAACTGGGCGTGCAGGCTGTCATGATGGTCCCTGTCTTTGCTGCATTTGCCGTGTTGACTGTTGCCATCCTGCTGGTGATGGAAGGGCTCTCAGCCTTCCTCCATGCACTGCGGCTGCACTGGGTGGAGTTCCAGAACAAGTTCTACTCGGGCACTGGCTACAAGCTGAGCCCCTTCACCTTCGCTGCCGAGGATGAATAG

Related Sequences

XP_004852258.1 Protein

Tcirg1 PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 3 isoform X4 [Heterocephalus glaber]

Length: 831 aa      View alignments
>XP_004852258.1
MGSMFRGEEVALVQLFLPTAAAYTCVSQLGELGLVEFRDLNASVSAFQRRFVVDVRRCEELEKTFTFLQEEVRRAGLVLPQPEGRLPAPPPRDLLHIQEETDRLAKELRDVRGNQQELRAQLHQLQLHEAVLGQSHGPPAAAHIDGPSSERSPLLLSPAGPHQDLRVNFVAGAVEPHKAAALERLLWRACRGFLIASFQEMEQQLEDPMTGEPTRWMTFLISYWGEQIGQKIHKITACFHCHVFPYLEQEEARRGVLQQLQQQSQELQEVLGETERFLSQVLGRVQQLLPAGQVQIRKMKAVYLALNQCSVSSTHKCLIAEAWCAALDLPTVQQVLRDSSSEAGVSAVAHRIPCQDMPPTLIRTNRFTVSFQGIVDAYGVGRYQEVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALAMVLAENQPAMKAAQNEIWQTFFGGRYLLLLMGLFSVYTGFIYNECFSRATTIFPSGWSVATMANQSGWSDAYLAQHPLLTLDPNISGVFLGPYPFGIDPIWSLATNHLSFLNSFKMKMSVILGVTHMAFGVVLGIFNHVHFGQGHRLLLETLPELIFLLGLFGYLVFLVVYKWLCISAGGSALAPSILIHFINMFLFSRSPTNRLLYHGQEVVQYALVVLALAAVPVLLLGTPLYLLRQQRSHRLQRRPAGGQDKDKAKLIDITDASESGWGPDEEKAGCSGDKKEAELVPSEVFMHQAIHTIEFCLGCISNTASYLRLWALSLAHAQLSEVLWAMVMRMGLSAGLKLGVQAVMMVPVFAAFAVLTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFAAEDE