Details from NCBI annotation

Gene Symbol Chka
Gene Name choline kinase alpha, transcript variant X2
Entrez Gene ID 101720091

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHKA ENSCPOG00000022236 (Guinea pig)

Gene Details

choline kinase alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017520, Guinea pig)

Protein Percentage 90.27%
CDS Percentage 89.61%
Ka/Ks Ratio 0.19341 (Ka = 0.0598, Ks = 0.3093)

CHKA ENSG00000110721 (Human)

Gene Details

choline kinase alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000265689, Human)

Protein Percentage 90.72%
CDS Percentage 89.4%
Ka/Ks Ratio 0.13719 (Ka = 0.0477, Ks = 0.3477)

Chka ENSMUSG00000024843 (Mouse)

Gene Details

choline kinase alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071933, Mouse)

Protein Percentage 88.6%
CDS Percentage 85.74%
Ka/Ks Ratio 0.12286 (Ka = 0.064, Ks = 0.521)

Chka ENSRNOG00000016791 (Rat)

Gene Details

choline kinase alpha (Chka), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023020, Rat)

Protein Percentage 90.47%
CDS Percentage 86.43%
Ka/Ks Ratio 0.10866 (Ka = 0.055, Ks = 0.5061)

Genome Location

Sequence Coding sequence

Length: 1296 bp    Location: 18744851..18807352   Strand: +
>XM_004852197.1
ATGAAGACCAAGTTCTGTACCGGGGGTGAGGCGGAGCCCTCGCCGCTCGGGCTGCTGCTGAGCTGTAGCGGCGGGAGCGCGGCCCCGGCGCCCGGCGTGGGACAGCAGCGCGACGCCGCCAGCGAACTGGACCCAAAGCAGCTGGGAGGCAGGCAGCCGCCGCTCGCTCTGCCCCCGCCGCCTTTGCCACTGCCCCTACCCTCGCCGGGGGCGGATGAGCAGCCCGAGCCCCGGACGCGGCGCAAGGCCTATCTGTGGTGCAAGGAGTTCCTGCCTGGCGCCTGGAGGGGCCTTCCCGAGGACCAGTTCCACATTAGTGTCATCAGGGGCGGCCTCAGTAACATGCTGTTCCAGTGCTCCCTACCTGACACCACGGCCTCTGTGGGCGATGAACCTAGGAAAGTGCTCCTGCGGCTGTATGGAGCCATCTTACAGATGGGAGCTGAGGCCATGGTTCTGGAAAGTGTTATGTTTGCCATTCTTGCAGAAAGGTCACTTGGGCCAAAACTCTATGGCATCTTTCCTCAAGGCCGACTGGAGCAGTTCATCCCGAGCAGACGATTAGACACTGAAGAATTAAGTTTGCCAGACATTTCTGCAGAAATAGCTGAGAAAATGGCCACATTTCATGGTATGAAAATGCCGTTCAATAAGGAACCCAAATGGCTTTTTGGAACAATGGAAAAATACCTAAATCAAGTGCTGAAAATTAAGTTTAATGAAGAATCCAGAGTTAAACGGCTCCAGAAGTTCCTCAGTTACAACCTGCCTTCTGAACTAGAGAAGCTGAGATTATTGCTTGAATCTACTCTGTCTCCAGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATGTCTTATTGCTGGAAGGCCAAGAGAATTCTGAAAAACAGAAACTGATGCTAATTGACTTTGAGTACAGCAGTTATAATTACAGAGGATTTGACATTGGGAATCACTTCTGTGAATGGATGTATGATTATACCTATGAAAAGTACCCTTTCTTCAGAGCAAATAGTCAGAAGTATCCCACCAGGAAACAGCAGCTCCACTTCATTTCCAGTTACTTGGCAACATTCCAAAATGACTTTGGAAACCTCAGTAGTGAAGAAAAATCCACTATAGAGGAAGAAATGTTGCTTGAAGTCAATAGGTTTGCCCTTGCTTCTCATTTCTTCTGGGGACTTTGGTCCATTGTACAGGCCAAGATTTCATCCATTGAATTTGGGTACATGGAATACGCCCAAGCCAGGTTTGATGCCTATTTCGAGCAGAAGAGGAAGCTGGGGGTGTGA

Related Sequences

XP_004852254.1 Protein

Chka PREDICTED: choline kinase alpha isoform X2 [Heterocephalus glaber]

Length: 431 aa      View alignments
>XP_004852254.1
MKTKFCTGGEAEPSPLGLLLSCSGGSAAPAPGVGQQRDAASELDPKQLGGRQPPLALPPPPLPLPLPSPGADEQPEPRTRRKAYLWCKEFLPGAWRGLPEDQFHISVIRGGLSNMLFQCSLPDTTASVGDEPRKVLLRLYGAILQMGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLKIKFNEESRVKRLQKFLSYNLPSELEKLRLLLESTLSPVVFCHNDCQEGNVLLLEGQENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYTYEKYPFFRANSQKYPTRKQQLHFISSYLATFQNDFGNLSSEEKSTIEEEMLLEVNRFALASHFFWGLWSIVQAKISSIEFGYMEYAQARFDAYFEQKRKLGV