Details from NCBI annotation

Gene Symbol Cpt1a
Gene Name carnitine palmitoyltransferase 1A (liver), transcript variant X2
Entrez Gene ID 101716055

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPT1A ENSCPOG00000004344 (Guinea pig)

Gene Details

carnitine palmitoyltransferase 1A (liver)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003917, Guinea pig)

Protein Percentage 91.06%
CDS Percentage 89.81%
Ka/Ks Ratio 0.1021 (Ka = 0.0436, Ks = 0.4274)

CPT1A ENSG00000110090 (Human)

Gene Details

carnitine palmitoyltransferase 1A (liver)

External Links

Gene Match (Ensembl Protein ID: ENSP00000265641, Human)

Protein Percentage 84.84%
CDS Percentage 83.46%
Ka/Ks Ratio 0.10711 (Ka = 0.0809, Ks = 0.7551)

Cpt1a ENSMUSG00000024900 (Mouse)

Gene Details

carnitine palmitoyltransferase 1a, liver

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025835, Mouse)

Protein Percentage 87.05%
CDS Percentage 83.38%
Ka/Ks Ratio 0.07383 (Ka = 0.0673, Ks = 0.9117)

Cpt1a ENSRNOG00000014254 (Rat)

Gene Details

carnitine palmitoyltransferase 1a, liver (Cpt1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019652, Rat)

Protein Percentage 86.92%
CDS Percentage 83.51%
Ka/Ks Ratio 0.07426 (Ka = 0.0673, Ks = 0.9058)

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location: 18112527..18161378   Strand: +
>XM_004852183.1
ATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACTGTCACTCCGGACGGGATCGACCTCCGGCTGAGCCATGAAGCCCTCAAACAGATCTGTCTCTCGGGCCTTCATTCCTGGAAAAAGAAGTTCATCCGATTTAAGAATGGCATCATCACCGGTGTGTTCCCGGCCAGTCCCTCCAGCTGGTTCATCGTGGTGGTGGGAGTGATGTCGTCCACGTACTCCAAGGTGGACCCTTCCTTAGGGATGATTGCAAGGATCAGCAGGACCCTTGATGGCACTGGCTACATGTCCACTCAGACGAAGGACGTGGTCAGCAGCCTCCTCTTTGGGACAGGCCTGTGGGTGGCGCTCATCTTCACCATGCGATATTCCCTGAAGGTGCTCCTGTCCTACCACGGCTGGATGTTCGCCGAGCATGGCAAGATGAGCCGCGCCACCAAGATCTGGATGACCATGGTCAAGATCTTTTCAGGTCGGAAACCTATGTTGTACAGCTTCCAGACCTCTCTGCCTCGCCAGCCAGTGCCAGCCATCAAAGACACCATGAAGAGGTATCTGGAATCAGTGAAGCCACTTATGAAGGAGGAGGAATTTAAGCGGATGACAGTGCTTGCCCAAGATTTTGCTGTCAATCTTGGACCAAGACTACAGTGGTATTTGAAGTTAAAGTCCTGGTGGGCCACAAATTATGTGAGTGACTGGTGGGAGAAGTACATCTACCTCCGGGGCCGGGGTCCGCTGATGGTAAACAGCAACTACTACGCCATGGAGTTGCTGTACGTCACCCCAACTCCCATCCAGGCAGCAAGAGCGGGCAACACCATCCACTCCATCCTGATGTACAGACAGAAGCTAGACCGGGAGGAAATCCAACCAATTCGTCTTGCTTCTACAATTCCCCTCTGCTCAGCGCAGTGGGAGCGTTTGTTTAACACTTGCCGGATCCCAGGGGAGGAGACAGACACCATCCAGCACCTCAACGACAGCCGGCACATTGTTGTGTACCATAGGGGGCGCTACTTCAAGGTCTGGCTCTACCACAATGGGCGGCTGCTGAAGCCCCGAGAGCTGGAGCAGCAGATGCAGCGGATCCTGGATGACCCGTCGGAGCCACAGGCTGGGGAGGCCAAATTGGCCGCCCTCACTGCGGGAGACAGAATACCCTGGGCCAAATGTCGCCAGGCCTACTTTGCACGTGGGAAAAATAAGCAGTCTCTGGATGCTGTGGAAAAAGCAGCGCTCTTCGTGACACTGGATGAAACCGAACAAGGATACAGAAAGGAAGACCCAGAAGCATCCTTGGACAGTTATGCTAAGTCCCTCCTGCATGGCCAGTGTTATGACAGGTGGTTTGACAAGTCCCTCACGTTTATTGTCTTCAAGAACGCCAAGATAGGTATAAATGCAGAGCACTCCTGGGCGGACGCGCCCATCATGGCCCATCTGTGGGAGGAAATCATGGCCACCGACTGGTTCCAGCTGGGCTATGAGGAGGATGGACACTGTAAAGGGAACACCAACCCCAACATCCCCTACCCGACCAGGCTACAGTGGGACATCCTGGAAGCATGCCAGGAAGTGATAGAGACTTCTCTGAGCAGCGCGAACCTTCTGGCGAACAATGTGGACATGCATTCTTTCCCATTCCACACCTTTGGTAAAGGACTAATCAAGAAGTGCCGGACCAGCCCGGATGCGTTCATACAGCTTGCCCTGCAGCTGGCTCACTACAAGGACATGGGCAAGTTCTGCCTCACGTACGAGGCCTCCATGACCCGGCTATTCCGAGAGGGGAGGACTGAGACAGTGCGCTCCTGTACCACGGAGTCCTGCAACTTCGTGCTGGCCATGGTGGACCCCACCCAGACGGTGGAGCAGAAGCTCAAGTTGTTCAAGACAGCATGTGAGAAGCATCAGCTCCTGTACCGCCTGGCCATGACTGGCTCTGGCATCGACCGCCATCTCTTCTGCCTCTATGTGGTCTCCAAGTACCTCGGCGTGGAGTCCCCTTTCCTTAAAGAGGTTTTATCTGAGCCTTGGCGATTGTCTACAAGCCAGACCCCGCAGCAGCAGGTGGAGCTCTTTGACTTCGTGAAGTACCCAAACTACGTGTCCGGCGGAGGGGGCTTCGGGCCGGTTGCTGACGATGGCTATGGTGTGTCGTACATCATTGTGGGAGACCACTTCATCCACTTCCATATTTCTTCCAAATTCTCCAGCCCAGAGACGGATTCTCATCGCTTCGGGATGCACCTGAGACAAGCTATGACAGACATCATTGCCTTGTTTGGGCTCTCGCTGAATTCCAAAAAGTAA

Related Sequences

XP_004852240.1 Protein

Cpt1a PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform isoform X2 [Heterocephalus glaber]

Length: 772 aa      View alignments
>XP_004852240.1
MAEAHQAVAFQFTVTPDGIDLRLSHEALKQICLSGLHSWKKKFIRFKNGIITGVFPASPSSWFIVVVGVMSSTYSKVDPSLGMIARISRTLDGTGYMSTQTKDVVSSLLFGTGLWVALIFTMRYSLKVLLSYHGWMFAEHGKMSRATKIWMTMVKIFSGRKPMLYSFQTSLPRQPVPAIKDTMKRYLESVKPLMKEEEFKRMTVLAQDFAVNLGPRLQWYLKLKSWWATNYVSDWWEKYIYLRGRGPLMVNSNYYAMELLYVTPTPIQAARAGNTIHSILMYRQKLDREEIQPIRLASTIPLCSAQWERLFNTCRIPGEETDTIQHLNDSRHIVVYHRGRYFKVWLYHNGRLLKPRELEQQMQRILDDPSEPQAGEAKLAALTAGDRIPWAKCRQAYFARGKNKQSLDAVEKAALFVTLDETEQGYRKEDPEASLDSYAKSLLHGQCYDRWFDKSLTFIVFKNAKIGINAEHSWADAPIMAHLWEEIMATDWFQLGYEEDGHCKGNTNPNIPYPTRLQWDILEACQEVIETSLSSANLLANNVDMHSFPFHTFGKGLIKKCRTSPDAFIQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCNFVLAMVDPTQTVEQKLKLFKTACEKHQLLYRLAMTGSGIDRHLFCLYVVSKYLGVESPFLKEVLSEPWRLSTSQTPQQQVELFDFVKYPNYVSGGGGFGPVADDGYGVSYIIVGDHFIHFHISSKFSSPETDSHRFGMHLRQAMTDIIALFGLSLNSKK