Sequence details NCBI ID: XM_004852154.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Ppfia1
Gene Name protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, transcript variant X5
Entrez Gene ID 101707111

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3822 bp    Location: 17024336..16908184   Strand: -
Raw sequence   
>XM_004852154.1
ATGATGTGCGAGGTGATGCCCACTATCAGTGAAGCAGAAGGCCCCCCGGGAGGAAGTGGAAGCCATGGATCTGGCTCCCCTTCACAGCCAGACGCAGATTCTCATTTTGAACAGCTTATGGTCTCCATGCTAGAAGAAAGGGATCGTCTTCTCGACACACTGAGAGAGACTCAAGAAACATTGGCATTAACCCAGGGGAAATTACACGAGGTTGGTCATGAAAGAGACTCCTTGCAGAGACAGCTCAATACCGCACTTCCACAGGAGTTTGCAGCACTCACGAAAGAACTCAACGTATGCAGGGAACAGCTGCTTGAGAGGGAAGAAGAAATTGCCGAGCTGAAAGCAGAAAGGAACAACACGAGGCTGCTCCTGGAACATTTGGAGTGCCTTGTCTCCAGGCACGAGCGCTCCCTCAGGATGACTGTGGTGAAGCGACAAGCGCAGTCTCCTGCAGGCGTGTCCAGTGAGGTGGAGGTGCTTAAAGCACTGAAGTCCTTATTTGAGCACCACAAGGCCCTGGATGAAAAGGTGCGAGAGCGATTACGAGTAGCACTGGAAAGGTGCAGTTTGTTAGAAGAAGAATTAGGTGCCACACACAAGGAGCTAATGATTCTTAAAGAACAGAATAATCAGAAAAAAACACTAACAGATGGAACTCTTGACGTAAACCATGAACAAGAAAATACACCAAGCACTAATGGAAAGAGATCTTCTGATGGCTCTTTAAGCCACGAGGAAGACCTTGCTAAAGTAATTGAGCTCCAAGAAGTCATAGACAAGCAGTCAAGAGAGCAGAGCCAGATGAAGGAGCGCCTGGCTGCCCTCTCCAGCCACGTGTCGGAGTTGGAAGAGGATCTTGACACAGCTAGAAAGGATCTCATCAAGTCTGAAGAAATGAACACAAAATTGCAAAGAGAAGTTCGCGAAGCAATGGCCCAGAAGGAAGACATGGAGGAGAGAATCACTACCCTTGAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACATCTGTGCATGACCTCAATGATAAACTTGAAAATGAAATTGCAAATAAAGATTCTATACATCGGCAGACAGAGGATAAAAACCGCCAGTTACAGGAGCGCCTGGAGCTGGCTGAGCAGAAGCTGCAGCAGACCCTGAGGAAGGCAGAGTCGCTGCCAGAGGTGGAGGCAGAACTGGCCCAGAGAGTGGCAGCACTCTCCAAGTCTGACCCTTTGCCTACTGGGAGCTCTGCTGTTAAGGAAGCTAAACTGTTCGAACTTACTTCCAAGCTTAGGAAGGCTGAAGAAAGACATGGCAACATTGAAGAGAGGCTACGGCAGATGGAGGCGCAGCTGGAAGAGAAAAACCAAGAACTGCAGCGGGCAAGGCAAAGAGAAAAGATGAATGAAGAACATAATAAACGCTTATCAGACACTGTTGACAAGCTGCTTTCAGAGTCCAACGAGAGGCTTCAGCTCCATCTGAAGGAGAGAATGGCCGCGCTGGAAGATAAGAATTCTCTATTACGAGAAGTTGAAAATGCAAAAAAGCAATTAGAAGAAACACAACATGATAAGGAGCAGCTTGTCCTGAACATCGAAGCTCTGAGGGCAGAGCTGGACCAGATGAGGCTGAGAGGGGCTTCACTCCACCTTGGCCGTCCCCACTTGGGCAGTGTCCCAGATTTCAGGCTCCCCATGGCAGACGGGCACACAGATGCCTACAGCACCAGTGCAGTGTTGCGGCGCCCCCAGAAAGGCCGGCTGGCAGCGCTGCGGGACGAGCCTTCCAAGGTACAGACTCTCAATGAACAGGATTGGGAACGTGCCCAGCAAGCCAGTGTTTTGGCAAATGTTGCACAGGCATTTGAGAGCGATGTTGATGTGTCTGATGGTGAAGATGACAGGGACACTCTGCTCAGCTCAGTTGATCTGTTGTCACCCAGCGGGCAGGCCGATGCACAGACTCTGGCCATGATGCTTCAGGAACAGCTGGATGCCATCAACAAAGAGATCAGGCTGATACAAGAAGAAAAGGAAAACACAGAGCAGCGGGCAGAGGAGATTGAGAGTAGAGTTGGCAGTGGAAGTTTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCTATTCCCCCCTTTCCTGCTTCCTCGCTTGCTGGCTCCTCTCCTCCAGGCAGCGGTCGCTCCACCCCTAGAAGGGTCCCTCACAGCCCGGCCCGGGAGGTGGACCGGCTGGGCGTCATGACTCTGCCTAGCGACTTAAGGAAACATCGTAGAAAGTCACCAGCTTCCAGAGAAGAGGTACGAGATGATAAGACAACGATAAAATGTGAAACTTCCCCTCCCTCCTCTCCAAGGTCCCTTCGATTAGACAGGCTGCACAAAGGGGCATTGCATACTGTCAGCCACGAGGACATCAGGGACATGAGAAACTCAACAGGCTCCCAGGATGGTCCTGTGAGCAATCCCAGCAGCAGTAACAGCAGCCAGGACTCGCTCCACAAAGCCCCCAAGAAGAAGGGCATCAAGTCCTCTATTGGCCGTTTGTTTGGCAAGAAGGAAAAGGGCCGGCCTGGACAAACTGGCAAAGAATCTCCAGGACAAGCTGGTGTTTCAGAGACAGAAAACTCATCTCAAGATGCCCTGGGACTTAGCAAATTGGGAGGACAGGCTGAAAAAAATCGTAAACTTCAAAAAAAACACGAATTGCTGGAGGAAGCCCGGAGGCAAGGCTTACCGTTTGCACAGTGGGATGGGCCAACAGTGGTTGTATGGCTGGAGCTCTGGGTTGGGATGCCTGCTTGGTACGTGGCTGCCTGCAGAGCAAATGTGAAAAGTGGGGCCATCATGTCAGCCCTGTCAGACACAGAGATCCAACGGGAGATTGGCATCAGCAACCCCCTACACAGGCTGAAGTTGCGGCTGGCCATCCAGGAGATCATGTCACTAACCAGCCCATCTGCCCCGCCCACATCGAGAACGACCACAGGAAATGTCTGGTTAACACACGAAGAGATGGAAACACTCGCAGCCACGCCGCAAACGGAAGATGAGGAGGGAAGCTGGGCTCAGACACTTGCATATGGGGACATGAACCATGAGTGGATTGGCAATGAGTGGCTGCCCAGCCTGGGTCTCCCTCAGTACCGCAGCTACTTCATGGAGTGCCTTGTGGATGCCCGGATGCTGGACCACCTGACCAAGAAAGACCTGCGAGGGCAGCTGAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCAGTGTGGAATTATGTGCCTGCGAAGATTAAATTATGATCGAAAAGAACTGGAAAGAAAAAGAGAAGAAAGTCAGAATGAAATAAAAGATGTGCTTGTTTGGAGCAATGATCGAGTGATTCGCTGGATCTTATCCATTGGCCTTAAAGAATATGCAAACAATCTTATAGAGAGTGGTGTTCACGGTGCACTTCTGGCCTTAGATGAAACCTTCGATTTCAATGCACTGGCACTGTTGTTACAGATCCCAACACAGAATACACAGGCTCGAGCTGTCTTGGAAAGAGAGTTTAACAACCTTTTGGTCATGGGGACTGACAGAAGGTTTGATGAAGACGATGACAAAAGCTTTAGGAGAGCACCTTCATGGAGAAAGAAGTTTAGACCAAAGGACATTCGTGGCTTGGCAGCTGGGTCAGCAGAGACACTCCCTGCAAACTTTCGAGTCACTTCTTCCATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATGGACGAACTGTGGCAGGATGTTACTAAGAAGCATACCTGTGGGAAAACACACTGTACAGCTGGAAGCACAAAGACCTCCTAA

Related Sequences

XP_004852211.1 Protein

Ppfia1 PREDICTED: liprin-alpha-1 isoform X5 [Heterocephalus glaber]

Length: 1273 aa      
>XP_004852211.1
MMCEVMPTISEAEGPPGGSGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGTLDVNHEQENTPSTNGKRSSDGSLSHEEDLAKVIELQEVIDKQSREQSQMKERLAALSSHVSELEEDLDTARKDLIKSEEMNTKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSIHRQTEDKNRQLQERLELAEQKLQQTLRKAESLPEVEAELAQRVAALSKSDPLPTGSSAVKEAKLFELTSKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVENAKKQLEETQHDKEQLVLNIEALRAELDQMRLRGASLHLGRPHLGSVPDFRLPMADGHTDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVSDGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPFPASSLAGSSPPGSGRSTPRRVPHSPAREVDRLGVMTLPSDLRKHRRKSPASREEVRDDKTTIKCETSPPSSPRSLRLDRLHKGALHTVSHEDIRDMRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKESPGQAGVSETENSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWLTHEEMETLAATPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQNEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFNALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDELWQDVTKKHTCGKTHCTAGSTKTS