Sequence details NCBI ID: XM_004852150.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Ppfia1
Gene Name protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, transcript variant X1
Entrez Gene ID 101707111

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3897 bp    Location: 17024336..16907663   Strand: -
Raw sequence   
>XM_004852150.1
ATGATGTGCGAGGTGATGCCCACTATCAGTGAAGCAGAAGGCCCCCCGGGAGGAAGTGGAAGCCATGGATCTGGCTCCCCTTCACAGCCAGACGCAGATTCTCATTTTGAACAGCTTATGGTCTCCATGCTAGAAGAAAGGGATCGTCTTCTCGACACACTGAGAGAGACTCAAGAAACATTGGCATTAACCCAGGGGAAATTACACGAGGTTGGTCATGAAAGAGACTCCTTGCAGAGACAGCTCAATACCGCACTTCCACAGGAGTTTGCAGCACTCACGAAAGAACTCAACGTATGCAGGGAACAGCTGCTTGAGAGGGAAGAAGAAATTGCCGAGCTGAAAGCAGAAAGGAACAACACGAGGCTGCTCCTGGAACATTTGGAGTGCCTTGTCTCCAGGCACGAGCGCTCCCTCAGGATGACTGTGGTGAAGCGACAAGCGCAGTCTCCTGCAGGCGTGTCCAGTGAGGTGGAGGTGCTTAAAGCACTGAAGTCCTTATTTGAGCACCACAAGGCCCTGGATGAAAAGGTGCGAGAGCGATTACGAGTAGCACTGGAAAGGTGCAGTTTGTTAGAAGAAGAATTAGGTGCCACACACAAGGAGCTAATGATTCTTAAAGAACAGAATAATCAGAAAAAAACACTAACAGATGGAACTCTTGACGTAAACCATGAACAAGAAAATACACCAAGCACTAATGGAAAGAGATCTTCTGATGGCTCTTTAAGCCACGAGGAAGACCTTGCTAAAGTAATTGAGCTCCAAGAAGTCATAGACAAGCAGTCAAGAGAGCAGAGCCAGATGAAGGAGCGCCTGGCTGCCCTCTCCAGCCACGTGTCGGAGTTGGAAGAGGATCTTGACACAGCTAGAAAGGATCTCATCAAGTCTGAAGAAATGAACACAAAATTGCAAAGAGAAGTTCGCGAAGCAATGGCCCAGAAGGAAGACATGGAGGAGAGAATCACTACCCTTGAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACATCTGTGCATGACCTCAATGATAAACTTGAAAATGAAATTGCAAATAAAGATTCTATACATCGGCAGACAGAGGATAAAAACCGCCAGTTACAGGAGCGCCTGGAGCTGGCTGAGCAGAAGCTGCAGCAGACCCTGAGGAAGGCAGAGTCGCTGCCAGAGGTGGAGGCAGAACTGGCCCAGAGAGTGGCAGCACTCTCCAAGTCTGACCCTTTGCCTACTGGGAGCTCTGCTGTTAAGGAAGCTAAACTGTTCGAACTTACTTCCAAGCTTAGGAAGGCTGAAGAAAGACATGGCAACATTGAAGAGAGGCTACGGCAGATGGAGGCGCAGCTGGAAGAGAAAAACCAAGAACTGCAGCGGGCAAGGCAAAGAGAAAAGATGAATGAAGAACATAATAAACGCTTATCAGACACTGTTGACAAGCTGCTTTCAGAGTCCAACGAGAGGCTTCAGCTCCATCTGAAGGAGAGAATGGCCGCGCTGGAAGATAAGAATTCTCTATTACGAGAAGTTGAAAATGCAAAAAAGCAATTAGAAGAAACACAACATGATAAGGAGCAGCTTGTCCTGAACATCGAAGCTCTGAGGGCAGAGCTGGACCAGATGAGGCTGAGAGGGGCTTCACTCCACCTTGGCCGTCCCCACTTGGGCAGTGTCCCAGATTTCAGGCTCCCCATGGCAGACGGGCACACAGATGCCTACAGCACCAGTGCAGTGTTGCGGCGCCCCCAGAAAGGCCGGCTGGCAGCGCTGCGGGACGAGCCTTCCAAGGTACAGACTCTCAATGAACAGGATTGGGAACGTGCCCAGCAAGCCAGTGTTTTGGCAAATGTTGCACAGGCATTTGAGAGCGATGTTGATGTGTCTGATGGTGAAGATGACAGGGACACTCTGCTCAGCTCAGTTGATCTGTTGTCACCCAGCGGGCAGGCCGATGCACAGACTCTGGCCATGATGCTTCAGGAACAGCTGGATGCCATCAACAAAGAGATCAGGCTGATACAAGAAGAAAAGGAAAACACAGAGCAGCGGGCAGAGGAGATTGAGAGTAGAGTTGGCAGTGGAAGTTTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCTATTCCCCCCTTTCCTGCTTCCTCGCTTGCTGGCTCCTCTCCTCCAGGCAGCGGTCGCTCCACCCCTAGAAGGGTCCCTCACAGCCCGGCCCGGGAGGTGGACCGGCTGGGCGTCATGACTCTGCCTAGCGACTTAAGGAAACATCGTAGAAAGTCACCAGCTTCCAGAGAAGAGGTACGAGATGATAAGACAACGATAAAATGTGAAACTTCCCCTCCCTCCTCTCCAAGGTCCCTTCGATTAGACAGGCTGCACAAAGGGGCATTGCATACTGTCAGCCACGAGGACATCAGGGACATGAGAAACTCAACAGGCTCCCAGGATGGTCCTGTGAGCAATCCCAGCAGCAGTAACAGCAGCCAGGACTCGCTCCACAAAGCCCCCAAGAAGAAGGGCATCAAGTCCTCTATTGGCCGTTTGTTTGGCAAGAAGGAAAAGGGCCGGCCTGGACAAACTGGCAAAGAATCTCCAGGACAAGCTGGTGTTTCAGAGACAGAAAACTCATCTCAAGATGCCCTGGGACTTAGCAAATTGGGAGGACAGGCTGAAAAAAATCGTAAACTTCAAAAAAAACACGAATTGCTGGAGGAAGCCCGGAGGCAAGGCTTACCGTTTGCACAGTGGGATGGGCCAACAGTGGTTGTATGGCTGGAGCTCTGGGTTGGGATGCCTGCTTGGTACGTGGCTGCCTGCAGAGCAAATGTGAAAAGTGGGGCCATCATGTCAGCCCTGTCAGACACAGAGATCCAACGGGAGATTGGCATCAGCAACCCCCTACACAGGCTGAAGTTGCGGCTGGCCATCCAGGAGATCATGTCACTAACCAGCCCATCTGCCCCGCCCACATCGAGAACGACCACAGGAAATGTCTGGTTAACACACGAAGAGATGGAAACACTCGCAGCCACGCCGCAAACGGAAGATGAGGAGGGAAGCTGGGCTCAGACACTTGCATATGGGGACATGAACCATGAGTGGATTGGCAATGAGTGGCTGCCCAGCCTGGGTCTCCCTCAGTACCGCAGCTACTTCATGGAGTGCCTTGTGGATGCCCGGATGCTGGACCACCTGACCAAGAAAGACCTGCGAGGGCAGCTGAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCAGTGTGGAATTATGTGCCTGCGAAGATTAAATTATGATCGAAAAGAACTGGAAAGAAAAAGAGAAGAAAGTCAGAATGAAATAAAAGATGTGCTTGTTTGGAGCAATGATCGAGTGATTCGCTGGATCTTATCCATTGGCCTTAAAGAATATGCAAACAATCTTATAGAGAGTGGTGTTCACGGTGCACTTCTGGCCTTAGATGAAACCTTCGATTTCAATGCACTGGCACTGTTGTTACAGATCCCAACACAGAATACACAGGCTCGAGCTGTCTTGGAAAGAGAGTTTAACAACCTTTTGGTCATGGGGACTGACAGAAGGTTTGATGAAGACGATGACAAAAGCTTTAGGAGAGCACCTTCATGGAGAAAGAAGTTTAGACCAAAGGACATTCGTGGCTTGGCAGCTGGGTCAGCAGAGACACTCCCTGCAAACTTTCGAGTCACTTCTTCCATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATGGACGAAGCTGAGACAAGCTTTAGTCTTCTGAGAGAAGTTGTGCTGGCCACGGCCCCTGCGGCTGTGCCTCTTCACCTGCGACCCACCCCTGAGAGCAGCAGTGTATCAGGAACACAGAGGTTGGATTCTGCTACAGTCAGGACTTACTCCTGCTAA

Related Sequences

XP_004852207.1 Protein

Ppfia1 PREDICTED: liprin-alpha-1 isoform X1 [Heterocephalus glaber]

Length: 1298 aa      
>XP_004852207.1
MMCEVMPTISEAEGPPGGSGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGTLDVNHEQENTPSTNGKRSSDGSLSHEEDLAKVIELQEVIDKQSREQSQMKERLAALSSHVSELEEDLDTARKDLIKSEEMNTKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSIHRQTEDKNRQLQERLELAEQKLQQTLRKAESLPEVEAELAQRVAALSKSDPLPTGSSAVKEAKLFELTSKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVENAKKQLEETQHDKEQLVLNIEALRAELDQMRLRGASLHLGRPHLGSVPDFRLPMADGHTDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVSDGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPFPASSLAGSSPPGSGRSTPRRVPHSPAREVDRLGVMTLPSDLRKHRRKSPASREEVRDDKTTIKCETSPPSSPRSLRLDRLHKGALHTVSHEDIRDMRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKESPGQAGVSETENSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWLTHEEMETLAATPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQNEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFNALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDEAETSFSLLREVVLATAPAAVPLHLRPTPESSSVSGTQRLDSATVRTYSC