Details from NCBI annotation

Gene Symbol Ctsd
Gene Name cathepsin D
Entrez Gene ID 101716979

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTSD ENSCPOG00000008493 (Guinea pig)

Gene Details

cathepsin D

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007635, Guinea pig)

Protein Percentage 88.21%
CDS Percentage 88.86%
Ka/Ks Ratio 0.13985 (Ka = 0.0624, Ks = 0.4459)

CTSD ENSG00000117984 (Human)

Gene Details

cathepsin D

External Links

Gene Match (Ensembl Protein ID: ENSP00000236671, Human)

Protein Percentage 83.17%
CDS Percentage 83.01%
Ka/Ks Ratio 0.09918 (Ka = 0.1003, Ks = 1.0111)

Ctsd ENSMUSG00000007891 (Mouse)

Gene Details

cathepsin D

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000121203, Mouse)

Protein Percentage 82.44%
CDS Percentage 79.76%
Ka/Ks Ratio 0.09678 (Ka = 0.1138, Ks = 1.1759)

Ctsd ENSRNOG00000020206 (Rat)

Gene Details

cathepsin D (Ctsd), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027407, Rat)

Protein Percentage 82.8%
CDS Percentage 80.84%
Ka/Ks Ratio 0.10486 (Ka = 0.1075, Ks = 1.0251)

Genome Location

Sequence Coding sequence

Length: 1233 bp    Location: 14671137..14661058   Strand: -
>XM_004852084.1
ATGCAGTCCCCGGTCCTCTTGCTGCTCGCTCTCGGCCTGTTGGCCGGGTCCTCCACCGCGCTCATCAGAATTCCCCTGCACAAGTTCAAGTCCATTCGCCGCACCATGACGGAAGTAGGAGGCTCCGTGGAAGACCTGATTGCCCATGGTCCCTTAACTAAGTACTCACCACAGTTGTCCACCAAGACCACGGGGCCAGTTCCCGAGACCCTGAAAAACTACATGGATGCTCAGTACTACGGGGAGATCGGCATTGGAACCCCGCCACAGTGCTTCACAGTTGTCTTCGACACTGGCTCCTCCAACCTGTGGGTCCCCTCTTCCAGGTGCAATATGCTCGACATAGCCTGCTGGTTCCACCACAAGTACCACAGTGACAAGTCCAGCACCTATGTGAAGAATGGCTCGTCCTTTGACATCCATTATGGCTCGGGTAGCCTTTCTGGGTACCTGAGCCAGGACACTGTCTCGGTACCCTGTCAATCAGCTGAGTCTAACCCCAGAAACCTCAGAGTGGAGAAGCAGACCTTTGGGGAGGCCACCAAGCAACCAGGCATCACCTTCATTGCAGCCAAATTTGATGGCATCCTGGGCATGGCTTACCCCCGCATCTCAGTCAACAATGTGCTGCCGGTCTTTGACAACCTGATGAGTCAGAAGCTGGTGGACAAGAATGTCTTCTCCTTCTACTTGAACAGGGACCCGAGTGCGCAGCCTGGCGGGGAGCTTATGCTGGGTGGCATTGACAGCAAGTACTACAAGGGCTCCTTCACCTACCTCAACGTCACCCGCAAGGCCTACTGGCAGGTCCACATGGACCAGTTGGAGGTGGGCAGCGGGCTGAACTTGTGCAAGGGGGGCTGTGAGGCCATCGTGGACACTGGCACCTCCCTCCTGGTGGGCCCCGTGGACGAAGTGAAGGAGCTGCAGAAGGCCATCGGGGCCATACCGCTGATCCAGGGCGAGTATATGGTCCCCTGTGAGAAGGTGTCCAGCCTGCCCTCAGTCACCCTGAAGCTTGGAGGCAGCGCCTACCCCCTGAGCCCAGAGGACTACGTTCTGAAGGTGTCGCAAGCCGGGAGGACTATATGCCTGAGCGGCTTCATGGGCATGGACATCCCACCGCCCACCGGGCCTCTCTGGATCCTGGGTGATGTCTTTATTGGCCGCTACTACACCGTCTTCGACCGAGACAACAACAGGGTGGGCTTCGCCCAGGCCGCCAAGCTCTAG

Related Sequences

XP_004852141.1 Protein

Ctsd PREDICTED: cathepsin D [Heterocephalus glaber]

Length: 410 aa      View alignments
>XP_004852141.1
MQSPVLLLLALGLLAGSSTALIRIPLHKFKSIRRTMTEVGGSVEDLIAHGPLTKYSPQLSTKTTGPVPETLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSSRCNMLDIACWFHHKYHSDKSSTYVKNGSSFDIHYGSGSLSGYLSQDTVSVPCQSAESNPRNLRVEKQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMSQKLVDKNVFSFYLNRDPSAQPGGELMLGGIDSKYYKGSFTYLNVTRKAYWQVHMDQLEVGSGLNLCKGGCEAIVDTGTSLLVGPVDEVKELQKAIGAIPLIQGEYMVPCEKVSSLPSVTLKLGGSAYPLSPEDYVLKVSQAGRTICLSGFMGMDIPPPTGPLWILGDVFIGRYYTVFDRDNNRVGFAQAAKL