Details from NCBI annotation

Gene Symbol Pamr1
Gene Name peptidase domain containing associated with muscle regeneration 1, transcript variant X2
Entrez Gene ID 101700664

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAMR1 ENSCPOG00000007812 (Guinea pig)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007035, Guinea pig)

Protein Percentage 93.47%
CDS Percentage 92.41%
Ka/Ks Ratio 0.12319 (Ka = 0.0311, Ks = 0.2526)

PAMR1 ENSG00000149090 (Human)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000278360, Human)

Protein Percentage 90.14%
CDS Percentage 88.47%
Ka/Ks Ratio 0.13762 (Ka = 0.0542, Ks = 0.3938)

Pamr1 ENSMUSG00000027188 (Mouse)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028612, Mouse)

Protein Percentage 89.86%
CDS Percentage 85.93%
Ka/Ks Ratio 0.08473 (Ka = 0.0512, Ks = 0.6045)

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location: 11681213..11753310   Strand: +
>XM_004852037.1
ATGGAGCTGGACCGCTGGGCGCAGCTGGGGCTAGTGTTCCTGCAGCTCCTTCTCATCTCGTCCTGGCCGAGAGAATACACAGTCATCAACGAAGCCTGCCCTGGAGCCGAGTGGAATATTATGTGTCGGGAGTGTTGTGAATATGATCAGATTGAATGCATCTGCCCTGGCAAGAAAGAAGTTGTGGGTTACACCATCCCTTGCTGCAGAAATGAGGAGAATGAATGTGACTCCTGTCTGATTCACCCAGGTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGGAATGGCTCATGGGGAGGCACTCTGGACGACTTCTACATCAAGGGCTTCTACTGTGCAGAGTGCCGAGCGGGCTGGTACGGCGGAGACTGCATGAGATGTGGCCAGGTTCTTCGAGCCCCAAAGGGTCAGATTTTGTTGGAGAGCTACCCCTTGAATGCTCGATGTGAATGGACCATTCATGCCAAGCCTGGGTTTATCATCCAACTGAGGTTTGTCATGCTGAGCCTGGAGTTTGACTACATGTGCCAGTATGACTACATGGAGATCCGTGATGGAGACAAAAACGACAGCCCCATTATCAAGCGTCTCTGTGGCAATGAGCGACCAGCACCTGTCCGGAGCACGGGCTCTGCACTCCATGTCCTCTTCCACTCCGATGGCTCCAAGAATTTTGATGGCTTCCATGCCATTTTTGAGGAGATCACAGCCTGTTCATCATCTCCTTGTCTGCATGATGGCACATGCCTCCTGGATACAAGTGGATCTTATAAATGTGCCTGCCTGGCAGGCTATACTGGGCAGCGCTGTGAAAATTTTCTAGAAGAACGAAACTGTTCAGAGCTTGGAGGCCCAGTCAATGGATACAAGAAAATAACTGGAGGGCCTGGGCTTCTCAATGGGAACTATGCAAAAATCGGCACTGTTGTATCATTCTTTTGTAACAACTCCTATGTTCTTAGTGGCAATGAGAAAAGAATTTGCCAGCAAAATGGAGAGTGGTCAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAGAACCAAAGATCTCAGACCTGGTGAGAAGGAGGGTTCTTCCAATGCAAGTTCAATCAAGGGAGACACCATTACACCAGCTCTACTCAACAGCCTTCAGCAAGCAGAAACTGCAGGATGCCCCTACCAAGAAGCTAGCACTCCCGTTTGGGGACCTGCCCACGGGGTACCAACATCTGCACACCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGCCTGGGCAGCAGCCGAAGGACGTGTCTGAGGACTGGGAAGTGGAGTGGGCGGGCGCCGACCTGCATTCCTATCTGTGGGAAAATTGAGAACACCACTTCTCCAAAGAGCCCAGTGAGCCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCAGGAGGGCAGCCTGCACAAGGGCACCTGGTTCCTGATCTGCAGCGGAGCCCTGGTGAACGAGCGCACCGTGGTGGCAGCTGCCCATTGTGTTACTGAGCTGGGGAAGGTCAACGTCATCAAGACGGCAGACCTCAAAGTCATCTTGGGAAAATTCTACCGGGATGATGACCAGGATGAGAAGACCATCCAGAGCTTACGGATTTCTGCTATCATTCTGCATCCCAACTACGATCCCATACTGCTCGATGCTGACATTGCGATCCTGAAGCTCCTGGACAAGGCCCGCATCAGCACCCGTGTCCAGCCCATCTGCCTTGCTGCCACCCGGGACCTCAGTGTCTCCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAACATCCTGGCAGATGTGAGGAGCCCTGGTTTCAAGAATGACACCCTGCGCTCAGGGACGGTCAGAGTGGTAGACTCACTGCTGTGTGAGGAGCAGCATGAAGACCATGATATCCCAGTAAGTGTCACTGACAACATGTTCTGTGCCAGCCAGGATCCCTCTACCCCTTCTAATATCTGCACTGCAGAGACAGGCGGCATCGCAGCTGTGTCTTTCCCAGGAAGAGCATCCCCTGAGCCACACTGGCATCTGGTGGGGCTGGTCAGCTGGAGCTATGACAAAACATGCAGCCATAGCATCTCCACAGCCTTCACCAAGGTGCTGCCTTTTAAAGACTGGATTGAGAGAAACATGAAGTGA

Related Sequences

XP_004852094.1 Protein

Pamr1 PREDICTED: inactive serine protease PAMR1 isoform X2 [Heterocephalus glaber]

Length: 720 aa      View alignments
>XP_004852094.1
MELDRWAQLGLVFLQLLLISSWPREYTVINEACPGAEWNIMCRECCEYDQIECICPGKKEVVGYTIPCCRNEENECDSCLIHPGCTIFENCKSCRNGSWGGTLDDFYIKGFYCAECRAGWYGGDCMRCGQVLRAPKGQILLESYPLNARCEWTIHAKPGFIIQLRFVMLSLEFDYMCQYDYMEIRDGDKNDSPIIKRLCGNERPAPVRSTGSALHVLFHSDGSKNFDGFHAIFEEITACSSSPCLHDGTCLLDTSGSYKCACLAGYTGQRCENFLEERNCSELGGPVNGYKKITGGPGLLNGNYAKIGTVVSFFCNNSYVLSGNEKRICQQNGEWSGKQPICIKACREPKISDLVRRRVLPMQVQSRETPLHQLYSTAFSKQKLQDAPTKKLALPFGDLPTGYQHLHTQLQYECISPFYRRLGSSRRTCLRTGKWSGRAPTCIPICGKIENTTSPKSPVSRWPWQAAIYRRTSGVQEGSLHKGTWFLICSGALVNERTVVAAAHCVTELGKVNVIKTADLKVILGKFYRDDDQDEKTIQSLRISAIILHPNYDPILLDADIAILKLLDKARISTRVQPICLAATRDLSVSFQESHITVAGWNILADVRSPGFKNDTLRSGTVRVVDSLLCEEQHEDHDIPVSVTDNMFCASQDPSTPSNICTAETGGIAAVSFPGRASPEPHWHLVGLVSWSYDKTCSHSISTAFTKVLPFKDWIERNMK