Details from NCBI annotation

Gene Symbol Traf6
Gene Name TNF receptor-associated factor 6, E3 ubiquitin protein ligase
Entrez Gene ID 101697126

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAF6 ENSCPOG00000004507 (Guinea pig)

Gene Details

TNF receptor-associated factor 6, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004067, Guinea pig)

Protein Percentage 95.21%
CDS Percentage 92.39%
Ka/Ks Ratio 0.08711 (Ka = 0.0234, Ks = 0.2684)

TRAF6 ENSG00000175104 (Human)

Gene Details

TNF receptor-associated factor 6, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000433623, Human)

Protein Percentage 92.34%
CDS Percentage 90.49%
Ka/Ks Ratio 0.12571 (Ka = 0.0404, Ks = 0.3214)

Traf6 ENSMUSG00000027164 (Mouse)

Gene Details

TNF receptor-associated factor 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004949, Mouse)

Protein Percentage 90.94%
CDS Percentage 86.04%
Ka/Ks Ratio 0.09493 (Ka = 0.0532, Ks = 0.56)

Traf6 ENSRNOG00000004639 (Rat)

Gene Details

TNF receptor-associated factor 6, E3 ubiquitin protein ligase (Traf6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006148, Rat)

Protein Percentage 88.87%
CDS Percentage 85.79%
Ka/Ks Ratio 0.11289 (Ka = 0.0621, Ks = 0.5502)

Genome Location

Sequence Coding sequence

Length: 1632 bp    Location: 10729825..10750091   Strand: +
>XM_004852025.1
ATGAGTCTGATAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGCGACTGCTGTGCTGCCATGGCCAGCTCCTGTAGCACTGCAGCGAAAGACGACAGTGTGAGCGGGGTGCCCAGCACCAGCACGGGGAACCTGTCCAGCTCCTTCATGGAGGAGATCCAGGGATATGATGTAGAGTTTGACCCGCCCCTGGAAAGCAAGTACGAGTGCCCCATCTGCTTGATGGCTCTGCGGGAAGCAGTGCAGACGCCGTGTGGCCATCGGTTCTGCAAGGCCTGCATCATCAAATCAATAAGGGATGCAGGTCACAAATGTCCAGTTGACAACGAAATACTGCTGGAAAATCAACTATTTCCTGATAATTTTGCAAAACGAGAGATTCTCTCTCTGATGGTAAAGTGTCCAAATGAAGGTTGTTTGCACAAGATGGAATTGAGGCATCTTGAGGACCATCAAGTACTCTGTGAGTTTGCTCTTGTGAATTGTTCCCAATGCCAGCGCCCCTTTCAAAAATGCCAGTTGAATATTCATATCCTCACGGATTGTCCAAGGAGACAGGTTTCTTGTGTAAACTGTGCTGTATCCATGCCTTTTGAGGAAAAGGAGATCCATGACCAGAACTGTCCTTTGGCAAATGTCATCTGTGAATATTGCCACACCATGCTCATCAGAGAACAGATGCCTACTCATTATGATCTAGACTGTCCTACAGCCCCGATCCCCTGCACCTTCAGTACTTTTGGTTGCCATGAAAAGATGCAGAGAAATCACTTGGCACGCCACCTGCAAGAGAATACCCAGTCGCACATGAGAATGTTGGCTCAGGCTGTTCATAGTTTAAACCTTGCTTTAACTCCTGTGCCTCCACGTGACCTGCTTCCATACGATGCTGCCTCTCTGCCCCGGGTTTCCTCTGGGTGCCACCCAGAGGTCCAGAATTTCCAGGAAACCATTCAACAGTTAGAGGGTCGCCTTGTAAGACAGGACCATCAAATCCGGGAGCTGACTGCGAAAATGGAAACTCAGTGTATGTATGTAAATGAGCTTAAAGGAACTATTCGAACCCTCGAGGACAAAGTCGCTGAAATTGAAGCACAGCAGTGCAATGGGATTTACATTTGGAAAATTGGCAACTTTGGCATGCACTTAAAGTCTCAAGAAGAGGAGAAGCCTGTTGTCATTCATAGCCCTGGATTCTACACAGGCAAACCCGGGTACAAACTGTGCATGCGCCTGCACCTTCAGTTACCAACTGCTCAGCGCTGTGCAAACTATATATCCCTCTTTGTCCACACAATGCAAGGAGAGTATGACAGCCACCTCCCTTGGCCCTTCCAGGGTACAATACGCCTTACAATTCTTGATCAGTCTGAAGCCCCAGTAAGGCAAAACCACGAAGAGATAATGGATGCCAAACCAGAGCTGCTTGCCTTCCAGCGGCCCACAATCCCACGGAATCCAAAAGGTTTTGGCTATGTAACTTTCATGCACTTGGAAGCCCTAAGACAAAGAACCTTCATTAAGGATGATACGTTGTTAGTGCGCTGTGAAGTTTCTACCCGCTTCGACATGGGTGGCCTTCGCAAGGAGGGTTTTCAGCCACGGAGTACTGATGCAGGGGTATAG

Related Sequences

XP_004852082.1 Protein

Traf6 PREDICTED: TNF receptor-associated factor 6 [Heterocephalus glaber]

Length: 543 aa      View alignments
>XP_004852082.1
MSLINCENSCGSSQSESDCCAAMASSCSTAAKDDSVSGVPSTSTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQVLCEFALVNCSQCQRPFQKCQLNIHILTDCPRRQVSCVNCAVSMPFEEKEIHDQNCPLANVICEYCHTMLIREQMPTHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLNLALTPVPPRDLLPYDAASLPRVSSGCHPEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQCMYVNELKGTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV