Details from NCBI annotation

Gene Symbol Lrrc4c
Gene Name leucine rich repeat containing 4C, transcript variant X5
Entrez Gene ID 101721726

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC4C ENSCPOG00000014997 (Guinea pig)

Gene Details

leucine rich repeat containing 4C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014972, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.09%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1561)

LRRC4C ENSG00000148948 (Human)

Gene Details

leucine rich repeat containing 4C

External Links

Gene Match (Ensembl Protein ID: ENSP00000278198, Human)

Protein Percentage 99.69%
CDS Percentage 94.53%
Ka/Ks Ratio 0.00647 (Ka = 0.0015, Ks = 0.2266)

Lrrc4c ENSMUSG00000050587 (Mouse)

Gene Details

leucine rich repeat containing 4C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130984, Mouse)

Protein Percentage 99.69%
CDS Percentage 93.02%
Ka/Ks Ratio 0.00438 (Ka = 0.0014, Ks = 0.3259)

Lrrc4c ENSRNOG00000029798 (Rat)

Gene Details

leucine rich repeat containing 4C (Lrrc4c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000044234, Rat)

Protein Percentage 99.69%
CDS Percentage 92.86%
Ka/Ks Ratio 0.00423 (Ka = 0.0014, Ks = 0.337)

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location: 7280476..7381831   Strand: +
>XM_004852010.1
ATGTTGAACAAGATGACCTTACATCCACAGCAGATAATGATAGGTCCTAGGTTTAACAGGGCCCTATTTGACCCCCTGCTTGTGGTGCTCCTGGCTCTTCAACTTCTTGTGGTGGCTGGTCTGGTGCGGGCTCAAACCTGCCCTTCAGTGTGCTCCTGCAGCAACCAGTTCAGCAAGGTGATTTGCGTCCGGAAAAACCTGCGTGAGGTTCCCGATGGCATCTCCACCAACACACGCCTGCTGAACCTTCATGAAAACCAAATCCAGATCATCAAAGTGAACAGCTTCAAGCACTTGAGGCACTTGGAAATCCTTCAACTGAGTCGGAACCATATTAGAACTATTGAAATTGGGGCCTTCAATGGTCTGGCCAACCTCAACACTCTGGAACTCTTTGACAATCGTCTTACTACCATCCCGAATGGAGCTTTTGTATATTTGTCTAAACTGAAGGAGCTCTGGTTACGAAACAACCCCATTGAAAGCATCCCTTCTTATGCTTTTAACAGAATCCCTTCTTTGCGTCGACTGGACTTAGGAGAATTGAAAAGGCTTTCGTACATCTCAGAAGGTGCCTTTGAAGGTCTCTCCAACTTGAGGTATTTGAACCTTGCCATGTGCAACCTCCGAGAAATCCCTAACCTCACACCACTTATCAAACTGGATGAGCTAGATCTTTCTGGGAATCATTTGTCTGCAATCAGGCCTGGCTCTTTTCAGGGGTTGATGCACCTTCAAAAACTCTGGATGATACAGTCCCAGATTCAAGTGATTGAACGGAATGCCTTTGATAACCTTCAGTCCCTAGTGGAGATCAACCTGGCTCACAACAATTTAACATTACTGCCTCATGACCTCTTCACACCCTTGCATCATCTAGAGAGGATACACTTACATCACAACCCTTGGAACTGTAACTGTGACATACTGTGGCTCAGCTGGTGGATAAAAGACATGGCTCCTTCCAACACAGCCTGTTGTGCCCGGTGCAACACTCCTCCCAGTCTGAAAGGGAGGTACATTGGGGAGCTCGACCAGAATTACTTCACATGCTATGCCCCAGTCATTGTGGAGCCCCCTGCAGACCTCAATGTCACTGAAGGCATGGCGGCTGAGCTGAAATGTCGCGCTTCCACATCCCTGACATCCGTATCTTGGATTACTCCAAATGGGACAGTCATGACACATGGGGCTTACAAGGTACGGATAGCTGTGCTCAGCGATGGTACATTAAATTTCACGAATGTAACCGTGCAAGATACAGGCATGTACACATGTATGGTGAGTAATTCTGTTGGAAATACTACCGCTTCGGCCACCCTGAATGTTACTGCAGCAACCACTACTCCTTTCTCTTACTTTTCAACTGTCACAGTAGAGACTATGGAACCTTCTCAGGATGAAGCGCGGACCACAGATAACAATGTGGGCCCCACTCCAGTGATCGACTGGGAGACCACCAATGTGACCACCTCTCTCACGCCACAGAGCACAAGGTCAACCGAAAAGACATTCACCATCCCAGTGACTGATATAAACAGTGGCATCCCAGGAATCGATGAGGTCATGAAGACTACCAAAATCATCATTGGGTGTTTTGTGGCCATCACACTCATGGCGGCAGTGATGCTGGTCATTTTCTATAAGATGAGGAAGCAGCACCATCGGCAAAACCATCATGCTCCAACGAGGACTGTTGAAATCATCAACGTGGATGATGAGATCACAGGGGACACGCCCATGGAAAGCCACCTGCCCATGCCTGCGATAGAGCATGAGCACCTAAATCACTATAACTCTTACAAATCTCCCTTCAACCACACAACAACAGTTAACACAATAAATTCAATACACAGTTCAGTGCATGAACCGTTATTGATCCGAATGAACTCGAAAGACAATGTACAAGAGACTCAAATCTAA

Related Sequences

XP_004852067.1 Protein

Lrrc4c PREDICTED: leucine-rich repeat-containing protein 4C-like isoform X5 [Heterocephalus glaber]

Length: 640 aa      View alignments
>XP_004852067.1
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPSLKGRYIGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTPVIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMAAVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNSYKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI