Details from NCBI annotation

Gene Symbol Tspan18
Gene Name tetraspanin 18, transcript variant X7
Entrez Gene ID 101712862

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSPAN18 ENSCPOG00000001959 (Guinea pig)

Gene Details

tetraspanin 18

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001767, Guinea pig)

Protein Percentage 95.56%
CDS Percentage 93.68%
Ka/Ks Ratio 0.05852 (Ka = 0.0188, Ks = 0.3208)

TSPAN18 ENSG00000157570 (Human)

Gene Details

tetraspanin 18

External Links

Gene Match (Ensembl Protein ID: ENSP00000339820, Human)

Protein Percentage 92.74%
CDS Percentage 88.71%
Ka/Ks Ratio 0.04858 (Ka = 0.0344, Ks = 0.7087)

Tspan18 ENSMUSG00000027217 (Mouse)

Gene Details

tetraspanin 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106896, Mouse)

Protein Percentage 88.31%
CDS Percentage 85.48%
Ka/Ks Ratio 0.07504 (Ka = 0.0596, Ks = 0.794)

Tspan18 ENSRNOG00000008758 (Rat)

Gene Details

tetraspanin 18 (Tspan18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011650, Rat)

Protein Percentage 87.9%
CDS Percentage 86.29%
Ka/Ks Ratio 0.0919 (Ka = 0.0607, Ks = 0.6604)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 3479597..3365032   Strand: -
>XM_004851989.1
ATGGAGGGCGACTGTCTGAGCTGCATGAAGTACCTGATGTTCGTTTTCAACTTCTTAATATTTCTGGGAGGGACCTGCCTGCTGGGCGTCGGCATCTGGGTCATGGTGGACCCCACCGGTTTCCGGGAGATCATAGCTGCCAACCCCCTGCTCCTCACAGGCGTCTACATTCTCCTGGCCATGGGGGGCCTGCTTTTCCTGCTGGGCTTCCTGGGCTGCTGCGGGGCTGTCCGCGAGAACAAGTGTCTGCTGTTATTTTTCTTCCTGTTCATCCTGATCATCTTCCTGGCAGAGCTGTCTGCAGCCATCCTGGCATTCATCTTCAGGGAAAACCTGACCCGTGAGTTCTTCACCAAGGAACTCACCAAGCACTACCAGGGCAGTAATGACACAGACGTCTTCTCCGCCACCTGGAATTCCGTCATGATCACATTTGGCTGCTGTGGGGTCAATGGACCTGAAGACTTCAAGCTGGCATCAGTGTTTCGCCTGCTGAGCCTGGACAGTGAGGAGGTGCCAGAGGCCTGCTGCCAGCGGGAGCCCCAGGCCCGGGACGGCGTGCTGCTCAGCCGGGAGGACTGCCTGCTGGGGCAGAGCCAGTTCATAAACAAGCAGGGTTGCTACTCGGTGATCCTCAATGCCTTCGAAACCTACGTCTACCTGGCAGGAGCCCTGGCCATAGGGGTGCTGGCCATCGAGCTTTTTGTTATGATCTTCGCCATGTGCCTCTTCCGGGGCATCCAGTAG

Related Sequences

XP_004852046.1 Protein

Tspan18 PREDICTED: tetraspanin-18 isoform X7 [Heterocephalus glaber]

Length: 248 aa      View alignments
>XP_004852046.1
MEGDCLSCMKYLMFVFNFLIFLGGTCLLGVGIWVMVDPTGFREIIAANPLLLTGVYILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTREFFTKELTKHYQGSNDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLSLDSEEVPEACCQREPQARDGVLLSREDCLLGQSQFINKQGCYSVILNAFETYVYLAGALAIGVLAIELFVMIFAMCLFRGIQ