Details from NCBI annotation

Gene Symbol Chst1
Gene Name carbohydrate (keratan sulfate Gal-6) sulfotransferase 1, transcript variant X4
Entrez Gene ID 101709273

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHST1 ENSCPOG00000000463 (Guinea pig)

Gene Details

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020134, Guinea pig)

Protein Percentage 96.59%
CDS Percentage 93.43%
Ka/Ks Ratio 0.0198 (Ka = 0.0134, Ks = 0.6754)

CHST1 ENSG00000175264 (Human)

Gene Details

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000309270, Human)

Protein Percentage 96.84%
CDS Percentage 92.13%
Ka/Ks Ratio 0.01123 (Ka = 0.0131, Ks = 1.1671)

Chst1 ENSMUSG00000027221 (Mouse)

Gene Details

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064246, Mouse)

Protein Percentage 93.92%
CDS Percentage 86.7%
Ka/Ks Ratio 0.02176 (Ka = 0.0291, Ks = 1.3362)

Chst1 ENSRNOG00000007989 (Rat)

Gene Details

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 (Chst1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010510, Rat)

Protein Percentage 94.65%
CDS Percentage 87.1%
Ka/Ks Ratio 0.01749 (Ka = 0.0249, Ks = 1.4255)

Genome Location

Sequence Coding sequence

Length: 1236 bp    Location: 2790859..2803082   Strand: +
>XM_004851973.1
ATGCAATGCTCCTGGAAGGCTGTGCTCCTCCTGGCCCTGGCCTCCATCGCTATCCAGTACACGGCCATCCGCACTTTCACCGCCAAGTCCTTCCACACCTGCCCTGGGCTGGCCGAGGCCGGGCTGGCCGAGCGGCCGTGCGAGGAGGGGCCCACCTTCGCCTATAACCTCTCTCGGAAGACCCACGTCCTCATCCTGGCCACCACTCGAAGTGGCTCGTCCTTCGTGGGCCAGCTCTTCAACCAGCACCTGGACGTCTTCTACCTGTTCGAGCCCCTCTACCACGTCCAGAACACGCTCATCCCCCGCTTCACCCAGGGCAAGAGCCCGGCCGACCGGCGGGTCATGCTGGGTGCCAGCCGTGACCTGCTGCGGAGCCTCTATGACTGCGACCTCTACTTCCTGGAGAACTACATCAAGCCGCCTCCAGTCAACCACACCACCGACAGGATCTTCCGCCGAGGGGCCAGCAGGGTCCTCTGCTCCCGGCCGGTGTGTGACCCCCCGGGGAGCCCCGACCTGGTCCTGGAAGAGGGGGACTGCGTGCGGAAGTGTGGGCTGCTGAACCTGACCGTGGCCGCCGAGGCCTGCCGCGAGCGCAGCCATGTGGCCATCAAGACGGTGCGGGTGCCAGAGGTGAACGACTTGCGGGCTCTGGTCGAAGACCCCCGCTTGAACCTCAAGGTCATCCAGCTGGTCCGAGACCCCCGGGGCATTCTGGCCTCCCGAAGCGAGACCTTCCGTGACACGTACCGGCTGTGGCGGCTCTGGTACGGCACGGGGAGGAAGCCGTACAACCTGGACGTGACGCAGCTGACCACGGTGTGCGAGGACTTCTCCAACTCCGTGTCCACGGGCCTCATGCGGCCCTCGTGGCTCAAGGGCAAGTACATGCTGGTGCGCTACGAGGACCTGGCCAGGAACCCCATGAAGAAGACCGAGGAGATCTACGGCTTCCTGGGGATCCCCCTGGACGGCCATGTGGCCCGCTGGATCCAGAACAACACTCGGGCCGACCCCACCCTGGCCAAGCACAAGTACGGCACCGTGCGGAACTCGGCTGCCACAGCTGAGAAGTGGCGCTTCCGCCTCTCCTACGACATCGTGGCCTTCGCCCAGAGCACCTGTCAGCAGGTGCTGGCCCAGCTGGGGTACAAGATAGCCGGGTCGGAAGAGGAGCTGAAGAACCCCTCCATCAGTCTGGTGGAGGAGCGGGACTTCCGGCCCTTCTCGTGA

Related Sequences

XP_004852030.1 Protein

Chst1 PREDICTED: carbohydrate sulfotransferase 1 isoform X4 [Heterocephalus glaber]

Length: 411 aa      View alignments
>XP_004852030.1
MQCSWKAVLLLALASIAIQYTAIRTFTAKSFHTCPGLAEAGLAERPCEEGPTFAYNLSRKTHVLILATTRSGSSFVGQLFNQHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGASRDLLRSLYDCDLYFLENYIKPPPVNHTTDRIFRRGASRVLCSRPVCDPPGSPDLVLEEGDCVRKCGLLNLTVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGILASRSETFRDTYRLWRLWYGTGRKPYNLDVTQLTTVCEDFSNSVSTGLMRPSWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDGHVARWIQNNTRADPTLAKHKYGTVRNSAATAEKWRFRLSYDIVAFAQSTCQQVLAQLGYKIAGSEEELKNPSISLVEERDFRPFS