Details from NCBI annotation

Gene Symbol Phf21a
Gene Name PHD finger protein 21A, transcript variant X5
Entrez Gene ID 101702080

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF21A ENSCPOG00000001299 (Guinea pig)

Gene Details

PHD finger protein 21A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001178, Guinea pig)

Protein Percentage 98.24%
CDS Percentage 96.48%
Ka/Ks Ratio 0.09603 (Ka = 0.0096, Ks = 0.0997)

PHF21A ENSG00000135365 (Human)

Gene Details

PHD finger protein 21A

External Links

Gene Match (Ensembl Protein ID: ENSP00000398824, Human)

Protein Percentage 98.24%
CDS Percentage 95.29%
Ka/Ks Ratio 0.05485 (Ka = 0.0086, Ks = 0.1566)

Phf21a ENSMUSG00000058318 (Mouse)

Gene Details

PHD finger protein 21A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088074, Mouse)

Protein Percentage 95.0%
CDS Percentage 92.06%
Ka/Ks Ratio 0.10002 (Ka = 0.0255, Ks = 0.255)

Phf21a ENSRNOG00000006063 (Rat)

Gene Details

Protein Phf21a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061099, Rat)

Protein Percentage 96.34%
CDS Percentage 92.68%
Ka/Ks Ratio 0.07516 (Ka = 0.0187, Ks = 0.2485)

Genome Location

Sequence Coding sequence

Length: 2046 bp    Location: 2388110..2580514   Strand: +
>XM_004851947.1
ATGGAGTTGCAAACTCTCCAGGAGGCTCTTAAAGTGGAAATTCAGGTTCATCAGAAACTAGTTGCTCAAATGAAGCAGGATCCACAGAATGCTGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGAAACAGAAAAGAGTAGTTGAACAGCTACGGAAGAACCTGATAGTAAAGCAAGAACAACCAGACAAGTTCCAAATACAGCCATTGCCACAATCTGAAAACAAACTACAAACAGCACAGCAGCAACCACTCCAGCAACTACAGCAACAGCAGCAGTATCACCACCACCACGCCCAGCAGTCAGCTGCACCTTCGCCCACCTTGACCGCTTCACAGAAGACTGTAACTACAGCTTCTATGATTACCACAAAGACACTACCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAGTCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAATTGTGGCAAAAAACACAGTCACTCTGCAGGTTCAGGCAACACCTCCTCAGCCCATCAAAGTTCCACAGTTTATACCCCCTCCTAGACTCACTCCACGTCCAAACTTTCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAATAACATTCCTATCGCCCCAGCGCCTCCTCCCATGCTTGCAGCTCCTCAACTTATCCAGAGGCCTGTCATGCTGACCAAGTTTACCCCCACAACCCTCCCCACGTCCCAGAATTCCATCCACCCTGTCCGGGTCGTCAATGGGCAGACCGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTGATAGCCACTCCAGGGACCAGACTCGCTGGACCTCAAACTGTACAGCTTAGCAAGCCAAGCCTTGAAAAACAGACCGTTAAATCCCACACAGAAACAGATGAGAAACAAACAGAAAGCCGTACCATCACCCCTCCTGCTGCACCCAAACCAAAACGGGAAGAAAACCCACAGAAACTTGCCTTCATGGTGTCTCTAGGGTTGGTAACACATGACCATCTAGAAGAGATCCAAAGCAAGAGACAAGAGAGAAAAAGAAGAACAACAGCAAATCCAGTGTATAGCGGAGCGGTCTTTGAGCCCGAGCGTAAGAAGAGTGCAGTCACCTACCTAAACAGCACAATGCATCCGGGGACCCGGAAGAGAGGTCGTCCTCCAAAATACAATGCAGTGCTGGGGTTTGGAGCCCTTGCCCCAACATCCCCCCCATCCAGTCATCCCGACTCCCCTGAAAGTGAAAAGACAGAGACCACATTCACTTTCCCTGCACCTGTGCAGCCTGTGTCCCTGCCCAGCCCCGCCTCCACAGACGGTGATATCCACGAGGATTTTTGCAGCATTTGCAGAAAAAGTGGCCAGTTGTTGATGTGTGACACGTGTTCCCGTGTATATCATCTGGACTGCCTCGACCCACCTCTGAAAACCATCCCCAAGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGATGCTGAAGAAAGAAGAAGCAATTCCATGGCCTGGAACTTTAGCAATTGTTCATTCCTATATTGCCTACAAAGCAGCTAAAGAAGAAGAGAAACAAAAGTTACTTAAATGGAGTTCAGATTTAAAACAAGAGCGAGAACAGTTAGAGCAGAAGGTGAAACAGCTCAGCAGTTCTATAAGTAAATGCATGGAAATGAAGAACACCATCCTAGCCCGGCAGAAGGAGATGCACAGCTCCTTGGAGAAAGTAAAACAGCTAATCCGCCTCATCCACGGCATCGACCTCTCCAAACCTGTAGACTCTGAGGCCACTGTGGGGGCCATCTCCAATGGCCCGGACTGCACGCCCCCTGCCAGCGCCACCGCCTCCACACCCGCCCCGTCCCCGTCCTCCCAGAGCTGCACAGCGAACTGTAACCCAGGGGAAGAGACTAAATAA

Related Sequences

XP_004852004.1 Protein

Phf21a PREDICTED: PHD finger protein 21A isoform X5 [Heterocephalus glaber]

Length: 681 aa      View alignments
>XP_004852004.1
MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAPSPTLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALAPTSPPSSHPDSPESEKTETTFTFPAPVQPVSLPSPASTDGDIHEDFCSICRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSSSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPASATASTPAPSPSSQSCTANCNPGEETK