Sequence details NCBI ID: XM_004851916.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ambra1
Gene Name autophagy/beclin-1 regulator 1, transcript variant X1
Entrez Gene ID 101725050

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMBRA1 ENSCPOG00000007341 (Guinea pig)

Gene Details

autophagy/beclin-1 regulator 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006618, Guinea pig)

Protein Percentage 96.98%
CDS Percentage 94.5%
Ka/Ks Ratio 0.08578 (Ka = 0.0156, Ks = 0.1822)

AMBRA1 ENSG00000110497 (Human)

Gene Details

autophagy/beclin-1 regulator 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000318313, Human)

Protein Percentage 95.85%
CDS Percentage 92.22%
Ka/Ks Ratio 0.07279 (Ka = 0.0208, Ks = 0.2857)

Ambra1 ENSMUSG00000040506 (Mouse)

Gene Details

autophagy/beclin 1 regulator 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049258, Mouse)

Protein Percentage 95.44%
CDS Percentage 90.4%
Ka/Ks Ratio 0.06411 (Ka = 0.0234, Ks = 0.3653)

Ambra1 ENSRNOG00000017422 (Rat)

Gene Details

autophagy/beclin 1 regulator 1 (Ambra1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039742, Rat)

Protein Percentage 94.36%
CDS Percentage 89.55%
Ka/Ks Ratio 0.07942 (Ka = 0.031, Ks = 0.3899)

Genome Location

Sequence Coding sequence

Length: 3888 bp    Location: 1966888..2160102   Strand: +
Raw sequence   
>XM_004851916.1
ATGAAGGTTGTCCCAGAGAAGAATGCTGTCCGGATACTCTGGGGCCGGGAGCGGGGCACTCGGGCCATGGGAGCCCAGCGTCTCCTGCAGGAGCTGGTGGAGGATAAAACCCGCTGGATGAAATGGGAAGGCAAGAGAGTAGAACTGCCTGATAGTCCACGCTCTACCTTCTTACTGGCCTTCAGCCCAGACAGGACTCTCTTGGCCTCCACCCATGTAAATCATAATATCTACATTACGGAGGTGAAGACGGGCAAGTGCATTCATTCTCTGATTGGACACCGCCGAACTCCCTGGTGTGTCACTTTCCATCCCACCATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGAGGTTAGGATTTGGGATTTACATGGTGGCAGTGAAAGCTGGTTTACAGATAGCAACAATGCCATTGCTTCCCTGGCTTTCCATCCTACGGCCCAGCTCCTGCTAATTGCTACTGCCAATGAGATCCACTTCTGGGACTGGAGTCGACGAGAGCCCTTTGCTGTGGTGAAGACAGCGAGTGAGATGGAGCGGGTCCGTCTGGTGAGATTTGATCCACTTGGACACTACTTACTCACAGCAATCGTTAACCCCTCTAATCAGCAGGGTGATGATGAACCAGAAATCCCCATAGATGGAACAGAATTATCCCACTACCGTCAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGGACGCCTCTCCTCCATAATTTCCTGCACATGCTGTCCTCCCGCTCCTCTGGCATCCAGGTGGGAGAGCAAAGCACAGTGCAAGATTCTGCCACCCCCTCACCCCCACCGCCTCCCCCTCAACCCTCCACGGAGCGCCCCAGGACTTCCGCTTACATCAGGCTCCGACAGCGGGTCAGTTACCCCACCACAGTTGAGTGCTGCCAGCACCCTGGGATCCTGTGCCTTTGCAGCCGCTGCTCTGGCACTCGAGTTCCTTCCCTCTTGCCACAGGACAGTGTCCCCCCTGCTTCTGCCAGAGCTACTACCCCTTCCTTTTCTTTTGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCATCACCGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCCGGCAACACACTCCGCAACCTCAGTCTGGGGCCCACGCGTCGCTCTTTGGGGGGCCCTCTGTCTAGCCACCCTTCTAGGTATCACCGAGAAATAGCTCCTGGGCTGACAGGATCGGAGTGGACTCGGACAGTCCTTAGCCTGAACTCCCGCTCTGAGGCGGAGTCCATGCCCCCACCCAGGACCAGTGCTTCCTCTGTGAGTTTGCTGTCTGTGCTGAGACAGCAGGAAGGTGGCTCTCAGGCATCAGTGTACACATCAGCCACAGAAGGGAGGGGCTTTCCAGCATCGGGGTTGGTGGGTGAGTCCGATGGAGGGAATGGTTCCAGCCAGAACAACTCAGGCACCATTCGCCATGAGCTTCAGTGTGACCTGCGTCGCTTCTTTCTGGAATATGACCGGCTGCAGGAGCTGGACCAGAGCCTGAGTGGGGAAGCTCCTCAGACTCAACAGGCCCAGGAAATGCTCAACAATAACATTGAATCTGAGAGGCCAGGCCCTTCCCATCAGCCTACCCCACACAGCAGTGAAAACAACTCCAACCTGTCCCGAGGCCACCTGAATCGCTGCCGAGCTTGCCACAATCTCCTGACCTTCAACAATGATACTCTGCGCTGGGAAAGAACCACACCCAACTACCCATCTGGTGAGGGTAGCTCCTCCTGGCAGGTCCCTAGCACTTTTGAGGGCATGTCATCCAGTGGCAACCAGTTGCCACCTCTTGAACGCACGGAGGGCCAGACGTCCAGCTCCAGCAGGCTGGAGATGAGTAGCTCTGCTAGTCCACAGGAGGAGAGGACTGTGGGGGTGGCCTTTAACCAGGAGACGGGCCACTGGGAGCGAATTTACACCCAGTCCAGCAGACCTGGAACTGTAGCACAGGAGGCCTTACATCAGGATATGCCGGAGGAGAGCCCTGAAGAGGATTCCCTCAGGAGGAGGCTGCTGGAGTCTTCCCTCATTTCATTATCCCGTTATGATGGAGCAGGATCCAGAGAGCACCCAATTTACCCAGACCCAGCGAGATTATCTCCTGCTGCATACTATGCCCAGAGGATGATCCAGTATCTCTCACGGAGAGACAGTATTCGCCAGCGTTCCATGCGCTACCAACAGAACCGTCTTCGCTCTTCCACCTCCTCCTCTTCCTCAGACAACCAGGGTCCATCAGTAGAGGGAGCCGAATTGGAATTTGAGGATTTTGAGGATAACGGTGACAGATCCAGGCACCGAGCTCCCCGTAATGCCCGGATGTCTGCACCTTCGCTTGGACGCTTCGTTCCAAGGCGTTTTTTGCTGCCTGAGTACTTGCCTTATGCTGGGATTTTTCATGAACGTGGACAGCCTGGCTTGGCTACGCACTCTTCTGTTAACAGGGTCCTGGCAGGGGCTGTGATTGGTGATGGACAGTCTGCGGTGGCCAGTAATATTGCCAATACAACCTACCGGCTCCAGTGGTGGGACTTTACTAAGTTTGACCTTCCGGAAATCAGTAATGCTTCTGTGAATGTGCTGGTGCAGAACTGCAAGATCTACAATGATGCCAGCTGTGACATCTCTGCAGATGGCCAGCTCCTGGCAGCCTTCATCCCTAGCAGCCAGAGGGGCTTTCCTGACGAAGGAATCCTGGCCGTGTACTCCCTCGCCCCCCATAACCTGGGTGAAATGCTCTACACCAAGCGATTTGGTCCCAATGCCATTTCGGTGAGCCTGTCCCCCATGGGCCGATATGTGATGGTGGGCTTGGCCTCACGCAGGATCCTGCTGCACCCCTCCACGGAGCACATGGTGGCCCAGGTCTTCAGGCTGCAGCAGGCCCATGGCGGTGAGACCTCCATGAGGAGAGTTTTCAACGTCCTTTACCCCATGCCTGCTGACCAGCGGAGACATGTCAGCATCAACTCTGCCCGCTGGCTGCCAGAGCCAGGGCTGGGCCTGGCCTATGGCACCAACAAAGGAGACCTGGTGATCTGCAGACCAGAGGCCTTAAACTCTGGCGTTGAATACTACTGGGACCAGCTGAATGAGACAGTCTTCACCGTCCATTCCAACAGCAGGAGCAGTGAGCGGCCCGGAACCAGCAGAGCCACATGGAGGACAGACAGAGATATGGGTCTGATGAATGCAATTGGGCTGCAGCCCCGGAACCCCACCACCTCTGTGACATCTCAGGGCACCCAGACTCTGGCCCTGCAGCTGCAGAATGCCGAGACACAGACAGACAGGGAGGAGCAAGAGCCCGGGATGGCACCTCCGGGTCCCGGTGAAGGTGAGGGCTCAGAGTACGGTGCCAGCGGGGAGGACGCCCTTAGCAGGATTCAGAGGCTGATGGCGGAGGGGGGCATGACGGCCGTGGTGCAGCGGGAGCAGAGCACGACCATGGCTTCCATGGGTGGCTTCGGCAACAACATTATCGTCAGCCACCGCATTCACCGCAGCTCCCAGACGGGCACGGAGTCGGGGGCTGCCCGCACCTCCTCTCCCCAGCCCTCCACGTCCCGGGGACTGCTCCCGGAACCCACGCAGCTGTCAGAGCGCAGCCTCGGCCCCCGGACAGCCTCCTGGGACCAGCCCAGCACCTCTGGGCAGGAGCCGCCCCAGCCAGCCCTGCCCTCTTCCTCCCCTGTCCCCCTTCCCAGCACAGAGGGACCAGCCCTGCACTGCGACCTGACCAATAACAACCATCTTCCCGATGGCGGCCGCGGCAACAGGGGGGAGGCCGCCAGCCCCAGCGGGGAGCCCCGGAACAGGTAG

Related Sequences

XP_004851973.1 Protein

Ambra1 PREDICTED: activating molecule in BECN1-regulated autophagy protein 1 isoform X1 [Heterocephalus glaber]

Length: 1295 aa      View alignments
>XP_004851973.1
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYITEVKTGKCIHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTVECCQHPGILCLCSRCSGTRVPSLLPQDSVPPASARATTPSFSFVQTEPFHPPEQASSPQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWTRTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLVGESDGGNGSSQNNSGTIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYPSGEGSSSWQVPSTFEGMSSSGNQLPPLERTEGQTSSSSRLEMSSSASPQEERTVGVAFNQETGHWERIYTQSSRPGTVAQEALHQDMPEESPEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGAELEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTDREEQEPGMAPPGPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESGAARTSSPQPSTSRGLLPEPTQLSERSLGPRTASWDQPSTSGQEPPQPALPSSSPVPLPSTEGPALHCDLTNNNHLPDGGRGNRGEAASPSGEPRNR