Details from NCBI annotation

Gene Symbol Harbi1
Gene Name harbinger transposase derived 1
Entrez Gene ID 101724328

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HARBI1 ENSCPOG00000000604 (Guinea pig)

Gene Details

harbinger transposase derived 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000532, Guinea pig)

Protein Percentage 94.27%
CDS Percentage 91.12%
Ka/Ks Ratio 0.0852 (Ka = 0.0277, Ks = 0.3246)

HARBI1 ENSG00000180423 (Human)

Gene Details

harbinger transposase derived 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317743, Human)

Protein Percentage 91.12%
CDS Percentage 87.3%
Ka/Ks Ratio 0.08563 (Ka = 0.0438, Ks = 0.5115)

Harbi1 ENSMUSG00000027243 (Mouse)

Gene Details

harbinger transposase derived 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088098, Mouse)

Protein Percentage 86.53%
CDS Percentage 82.33%
Ka/Ks Ratio 0.08706 (Ka = 0.0693, Ks = 0.7955)

Harbi1 ENSRNOG00000043204 (Rat)

Gene Details

harbinger transposase derived 1 (Harbi1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061152, Rat)

Protein Percentage 88.25%
CDS Percentage 82.43%
Ka/Ks Ratio 0.07901 (Ka = 0.0636, Ks = 0.8052)

Genome Location

Sequence Coding sequence

Length: 1050 bp    Location: 1954017..1963192   Strand: +
>XM_004851915.1
ATGGCCGTCCCCATCACAGTGTTGGACTGTGATCTCCTGTTGTATGGCCGGGGTCACCGGACTTTGGACCGCTTTAAGCTCGATGACGTGACCGATGAAGACTTGATGTCCATGTATGGGTTTCCTCGACAGTTCATTTATTACCTGGTGGAGCTCTTGGGGCCAAGTCTTTCCCGACCTACTCAGCGGTCCAGGGCCATCAGCCCAGAGACACAGATCCTTGCAGCACTGGGCTTTTACACCTCAGGCTCCTTCCAGACACGGATGGGAGATGCTATTGGAATCAGCCAGGCATCTATGAGTCGTTGTGTTGCCAATGTCACCGAAGCACTTATGGAAAGAGCCTCCCAGTTCATTCGCTTTCCAGCTGATGAAGCCTCTATGCAGGCTCTGAAGGATGAATTCTATGGGTTGGCAGGGATGCCAGGGGTGGTGGGGGTGGTTGACTGTATCCACGTGGCAATTAAGGCACCAAATGCTGAAGATCTCTCCTATGTGAACCGCAAAGGTCTGCATTCTCTAAACTGCTTGATGGTGTGTGACATCAGAGGGACGCTAATGACCGTGGAGACAAACTGGCCTGGCAGCCTACAGGACTGTGCTGTGCTGCAGCAGTCCTCCCTAAGTAGTCAGTTTGAAGCTGGAATGCTCAAGAATAATTGGCTCCTTGGTGACAGTTCCTTCTTCCTCCGCACCTGGCTCATGACCCCACTTCCCCTCCCGAAAACCCCCGCGGAAGATCGCTACAACCTGGCGCACTCTGCGACCCACAGTGTGATGGAGAAGACTCTGCAGACGCTCTGCTCCCGCTTCCGCTGCCTGGACGGGTCCAAGGGGGCGCTGCAGTACTCTCCGGAGAAGTCAAGCCACATCATCACGGCCTGCTGTGTCCTGCACAACATCTCCCTGGAACACAGCATGGACGTCTGGTCCTCCCCACTGGCAGGGCCCGTGCAGCAGTCCCCGGAGGAGGAGTATGAGCCCATGGAGTCCCTGGACCACGAGGCCGACCGTAGCCGCCAGGAGCTGGTGCTGGCGCATTTTAGCTGA

Related Sequences

XP_004851972.1 Protein

Harbi1 PREDICTED: putative nuclease HARBI1 [Heterocephalus glaber]

Length: 349 aa      View alignments
>XP_004851972.1
MAVPITVLDCDLLLYGRGHRTLDRFKLDDVTDEDLMSMYGFPRQFIYYLVELLGPSLSRPTQRSRAISPETQILAALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALMERASQFIRFPADEASMQALKDEFYGLAGMPGVVGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQQSSLSSQFEAGMLKNNWLLGDSSFFLRTWLMTPLPLPKTPAEDRYNLAHSATHSVMEKTLQTLCSRFRCLDGSKGALQYSPEKSSHIITACCVLHNISLEHSMDVWSSPLAGPVQQSPEEEYEPMESLDHEADRSRQELVLAHFS