Details from NCBI annotation

Gene Symbol Pacsin3
Gene Name protein kinase C and casein kinase substrate in neurons 3, transcript variant X3
Entrez Gene ID 101716275

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PACSIN3 ENSCPOG00000013356 (Guinea pig)

Gene Details

protein kinase C and casein kinase substrate in neurons 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012022, Guinea pig)

Protein Percentage 95.27%
CDS Percentage 92.36%
Ka/Ks Ratio 0.05891 (Ka = 0.023, Ks = 0.3899)

PACSIN3 ENSG00000165912 (Human)

Gene Details

protein kinase C and casein kinase substrate in neurons 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000440945, Human)

Protein Percentage 95.74%
CDS Percentage 90.94%
Ka/Ks Ratio 0.03319 (Ka = 0.0193, Ks = 0.5804)

Pacsin3 ENSMUSG00000027257 (Mouse)

Gene Details

protein kinase C and casein kinase substrate in neurons 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106981, Mouse)

Protein Percentage 94.56%
CDS Percentage 88.18%
Ka/Ks Ratio 0.02975 (Ka = 0.0247, Ks = 0.8293)

Pacsin3 ENSRNOG00000014204 (Rat)

Gene Details

protein kinase C and casein kinase substrate in neurons 3 (Pacsin3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054003, Rat)

Protein Percentage 94.09%
CDS Percentage 87.86%
Ka/Ks Ratio 0.03336 (Ka = 0.0273, Ks = 0.8169)

Genome Location

Sequence Coding sequence

Length: 1272 bp    Location: 1505633..1512610   Strand: +
>XM_004851889.1
ATGGCTCCAGAAGAAGATGCTGGAGGGGAGGCCCTGGGGGGCAGTTTCTGGGAGGCTGGCAACTACAGGCAGACGGTGCAGCGGGTGGAGGATGGGCACCGGCTCTGCGGGGACCTGGTCAGCTGCTTCCAGGAGCGTGCCCGCATCGAGAAGGCCTATGCCCAGCAGCTGGCTGAATGGGCCCGCAAGTGGAGGGGCGCGGTGGAGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCTGGCACGCCTTCTTCACGGCGGCCGAGCGGCTAAGCGAGCTGCACCTGGAGGTGCGCGAGAAGCTCCATGGGCCTGACAGCGAGCAGGTGCGCTCCTGGCAGCGGGGCGCCTTCCACCGGCCAGTGCTGGGCGGCTTCCGGGAGAGTCGGGCAGCTGAGGACAGCTTCCGAAAGGCCCAGAAGCCCTGGCTCAAGAGGCTGAAGGAGGTTGAGGCATCCAAGAAGAGCTACCATGCAGCCCGGAAGGATGAGAAGACAGCACAGACCCGGGAGAGCCACGCCAAGGCAGACAGCGCCGTGTCGCAGGAACAGCTGCGCAAACTGCAAGAGCGCGTGGGGCGCTGCACCAAGGAGGCGGAGAAGACGAAAAGCCAGTACGAGCAGACGCTAGCGGAGCTGCACCGCTACACCCCGCGCTACATGGAGGACATGGAGCAGGCCTTTGAGAGCTGCCAGGCTGCCGAGCGCCAGCGGCTTCTCTTCTTCAAGGACATGCTGCTCACCTTGCACCAGCACCTTGACCTCTCCAGCAACGACAAGTTCCACGAACTCCACCGAGACCTGCACCAGGGCATTGAGGCAGCCAGTGACGAGGAGGACCTGCGCTGGTGGCGCAGCACCCATGGGCCAGGCATGGCCATGAACTGGCCACAGTTTGAGGAATGGTCCTTGGACACGCAGAGGACAATCAGCCGGAAGGAGAGGGGTGGCCGGAGCCCCGATGAGGTTACTCTGACCAGCATTGTGCCCACAAGAGATGGCACCGCGCCCCCACCCCAGTCCCCGGGGTCCCCAGGTGGGCAGGAGGAAGAGTGGTCCGATGAGGAGACCCCCCGGAAGGCTGCCACCGGGGTGCGGGTGCGGGCGCTCTATGACTATGCTGGCCAGGAAGCAGATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTACTGAAGATGAGCGAGGAGGATGAGCAGGGCTGGTGCCAGGGGCAGTTACAGAGTGGCCGCATTGGCCTGTACCCTGCCAATTACGTGGAGTGTGTGGGTGCCTGA

Related Sequences

XP_004851946.1 Protein

Pacsin3 PREDICTED: protein kinase C and casein kinase substrate in neurons protein 3 isoform X3 [Heterocephalus glaber]

Length: 423 aa      View alignments
>XP_004851946.1
MAPEEDAGGEALGGSFWEAGNYRQTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLAEWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELHLEVREKLHGPDSEQVRSWQRGAFHRPVLGGFRESRAAEDSFRKAQKPWLKRLKEVEASKKSYHAARKDEKTAQTRESHAKADSAVSQEQLRKLQERVGRCTKEAEKTKSQYEQTLAELHRYTPRYMEDMEQAFESCQAAERQRLLFFKDMLLTLHQHLDLSSNDKFHELHRDLHQGIEAASDEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRTISRKERGGRSPDEVTLTSIVPTRDGTAPPPQSPGSPGGQEEEWSDEETPRKAATGVRVRALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECVGA