Details from NCBI annotation

Gene Symbol Nr1h3
Gene Name nuclear receptor subfamily 1, group H, member 3, transcript variant X2
Entrez Gene ID 101709627

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NR1H3 ENSCPOG00000013362 (Guinea pig)

Gene Details

nuclear receptor subfamily 1, group H, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012029, Guinea pig)

Protein Percentage 92.15%
CDS Percentage 91.22%
Ka/Ks Ratio 0.11901 (Ka = 0.0403, Ks = 0.3386)

NR1H3 ENSG00000025434 (Human)

Gene Details

nuclear receptor subfamily 1, group H, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000420656, Human)

Protein Percentage 91.87%
CDS Percentage 90.07%
Ka/Ks Ratio 0.09077 (Ka = 0.0384, Ks = 0.4232)

Nr1h3 ENSMUSG00000002108 (Mouse)

Gene Details

nuclear receptor subfamily 1, group H, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106988, Mouse)

Protein Percentage 90.02%
CDS Percentage 86.7%
Ka/Ks Ratio 0.07108 (Ka = 0.0482, Ks = 0.6775)

Nr1h3 ENSRNOG00000013172 (Rat)

Gene Details

nuclear receptor subfamily 1, group H, member 3 (Nr1h3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018154, Rat)

Protein Percentage 90.25%
CDS Percentage 87.0%
Ka/Ks Ratio 0.08314 (Ka = 0.0498, Ks = 0.5985)

Genome Location

Sequence Coding sequence

Length: 1332 bp    Location: 1467796..1459601   Strand: -
>XM_004851862.1
ATGTCCTTGTGGCTGGAGGCCCCTGTGCCTGACTCTGCAGTGGAGCTGTGGGAGCCAGAGGCCCACGATGTCAGCAGCCAGGCCCAGGGAGGCAGCAGCCGCCTCCTCAGCAAGGAAGCCAGGATGCCTCCAGCTGCCAGGGGCACTTTGGCAATGGGGCTGAAGGCAGAGGAGCCCACAGCCCTGCTCCCCAGGGTGGAGGCCCTTCCAGAGCCCACAGAGCTCCGACCACAGAAGCGGAAAAAGGGGCCGGCCCCCAAGATGCTGGGCAATGAGCTGTGCAGTGTGTGCGGGGACAAGGCCTCCGGCTTCCACTACAATGTGCTGAGCTGCGAGGGCTGCAAGGGTTTCTTCCGCCGCAGTGTCATCAAGGGGGCGCACTACGTGTGCCACAGTGGCGGCCACTGCCCCATGGACACATACATGCGTCGCAAGTGCCAAGAGTGTCGGCTTCGCAAGTGCCGCCAGGCGGGCATGCGGGAAGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAGCAGGCCCAGGCCACATCTGTGCCCACGAGGCCTGCCCCGCCCCACCAGGTCCTGCCCCAGCTCAGCCCAGAGCAGCTGGGCATGATTGAGAAGCTGGTTGCTGCCCAGCAGCAGTGTAACAAGCGCTCCTTTTCTGACCAGCTTCGTGTCACGCCTTGGCCCATGGCACCAGATCCCCACAGCCGGGAGGCCCGGCAGCAGCGCTTCGCCCACTTCACAGAGCTGGCCATTGTGTCCGTGCAGGAGATTGTCGACTTTGCCAAACAGCTGCCTGGCTTCCTGCAGCTCAGCCGGGAGGACCAGATCGCCCTGCTGAAGACCTCTACAATCGAGGTGATGCTTCTGGAAACATCCCGGAGGTACAACCCTGGGAGCGAGAGCATCACCTTCCTCAAGAATTTCAGTTATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGTTCTCCAGAGCCATGAATGAGCTGCAGCTCAATGATGCCGAGTTCGCGCTGCTCATTGCCATCAGCATCTTCTCCGCAGACCGACCCAACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAACACACATACGTCGAGGCCCTGCATGCCTATGTTTCCATCCACCACCCCCATGACCGACTCATGTTTCCACGAATGCTAATGAAACTGGTGAGCCTCCGCACACTGAGCAGCGTCCACTCGGAGCAAGTGTTCGCCCTGCGTCTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAGATCTGGGATGTACACGAATGA

Related Sequences

XP_004851919.1 Protein

Nr1h3 PREDICTED: oxysterols receptor LXR-alpha isoform X2 [Heterocephalus glaber]

Length: 443 aa      View alignments
>XP_004851919.1
MSLWLEAPVPDSAVELWEPEAHDVSSQAQGGSSRLLSKEARMPPAARGTLAMGLKAEEPTALLPRVEALPEPTELRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAQATSVPTRPAPPHQVLPQLSPEQLGMIEKLVAAQQQCNKRSFSDQLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSTIEVMLLETSRRYNPGSESITFLKNFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE