Sequence details NCBI ID: XM_004851351.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nup205
Gene Name nucleoporin 205kDa
Entrez Gene ID 101705038

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUP205 ENSCPOG00000004693 (Guinea pig)

Gene Details

nucleoporin 205kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004225, Guinea pig)

Protein Percentage 95.12%
CDS Percentage 92.44%
Ka/Ks Ratio 0.12118 (Ka = 0.0286, Ks = 0.2358)

NUP205 ENSG00000155561 (Human)

Gene Details

nucleoporin 205kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000285968, Human)

Protein Percentage 92.99%
CDS Percentage 89.17%
Ka/Ks Ratio 0.10008 (Ka = 0.0379, Ks = 0.3784)

Nup205 ENSMUSG00000038759 (Mouse)

Gene Details

nucleoporin 205

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039656, Mouse)

Protein Percentage 91.16%
CDS Percentage 85.87%
Ka/Ks Ratio 0.08677 (Ka = 0.0485, Ks = 0.5592)

Nup205 ENSRNOG00000010852 (Rat)

Gene Details

nucleoporin 205 (Nup205), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014833, Rat)

Protein Percentage 92.14%
CDS Percentage 86.18%
Ka/Ks Ratio 0.07637 (Ka = 0.0426, Ks = 0.5573)

Genome Location

Sequence Coding sequence

Length: 5985 bp    Location: 15797543..15936795   Strand: +
Raw sequence   
>XM_004851351.1
ATGGACAATCCTCAAGAAGGCTGGGAAACAGGAAATTCTCGAAGGAGTCTGCGCCGGCCGCCGCGCTGCCGCCTGCCCCGTTCCCTTTTCCTGGTGCCGACTCCACGCGCTGCCGCGTTCTCAAGAGAGACCACTAAGCGAGTGTCGAGGGCAAAACTCTTCAGAACCAGGCCTGATTGCTTCAGCGAGTCCGACCTTTACGGCCGAGAGAGACTCTCAGCTTTCGCTGCTAGTCTCTGGGGTCCTTACAAAGACATTTGGCAGACAGTGGGAAATGCTCTTTGGAGAAGACAACCTGAAGCTGTCCACCTTCTGGACATGATTTTGAAGAAACACAGACCTGACTTCATCTCATTGTTCAAAAACCCACCAAAAAATGTTCAACAGCATGAGATGATTCAGAAAGCCAGTATTGAAGGAGTTGCCATCCAGGGTCAACAGGGAACCCGACCTCTTCCTGAAAAGCTCATTAAAGAAGCCTTTATTCTCAGCGACCTTTTTGATATTGGAGAATTAGCAGCTGTTGAGCTTCTCCTTGCTGGAGAGCATCAACAGCCACATTTTCCTGGCCTCACCAGAGGATTAGTAGCTGTTCTTTTGTACTGGGATGGAAAGCGATGCATTGCAAATTCCCTGAAAGCCTTAATACAGTCTAGACAAGGCAAGACATGGACTCTAGAACTCAGCCCAGAGCTGATTTCCATAACAACACGCTTTACAGATGAGCTGATGGAGCAAGGACTGACTTACAAAGTTCTTACTCTGGTGTCACATATTGATGTAAATAACGAGTTTGAGAAACTACAGCGAGACAGAGGTCTGGGCAGTGAAAAACATCGCAAAGAGGTTTCTGATCTCATCAAAGAGTGCAGGCAGTCTTTGGCAGAAAGTCTTTTCGCCTGGGCTTGCCAGTCTCCGTTAGGCAAAGATGACACCCTCCTCCTTATTGGCCATTTGGAGGGAGTGACAGTGGAGGCCAATGGTTCTCTGGATGCGGTGAATCTGGCTCTTCTTATGGCACTTCTGTACTGTTTTGACATCAGTTTTATAGAACAAAGCACAGAGGAACGAGATGATGTGATTCATCAGCTTCCACTATTGTCAGAGAGACAGTACATCGCCACAATTCACTCTCGTCTTCAGGACTCACAGCCGTGGAAGCTTCCAGGGCTGCAAGCTACTGTTAGACTTGCCTGGGCACTGGCACTGAGGGGAATATCTCAGCTACCTGATGTGACAGCACTGGCTGAATTCACAGAAGCAGATGAAACAATGGCAGAGCTTGCAGTTGCTGACAATGTTTTCCTGTTCCTCACTGAATCAGTAGTGGCGACAGAAAACTTCTATCAGGAAGAATTTTATCTTCGTAGAACCCATAATCTCATCACAGATTTCCTTGCACTTATGCCAATGAAAGTTGTCTTATCAAAATTTGTCAGGCAAATGGGTGACCTACTGCCTCCAACTATTTATATTCCTTACTTGAAAATGCTCCAGGGATTGGCTAACGGGCCTCAATGTGCCCACTACTGCTTCAGCCTCCTCAAAGTCAATGGTAGTAGTCACGTTGAAAATATCCAGGGAGCAGGTGGCAGTCCAGTTTCCTGGGAGCACTTCTTTCACTCCTTAATGCTTTACCATGAGCACCTTCGGAAGGACCTCCCGAGTGCAGACAGTGTCCAGTACCGCCACCTCCCTTCACGTGGCATCACCCAGAAGGAGCAGGATGGACTGATCGCCTTTTTGCAGCTCGCGTCTATCATCATTACATGGAGTGAAAATGCTCGACTGGCACTCTGCGAACATCCTCAGTGGACACCTGTTGTGGTGATTCTGGGCCTCCTACAGTGCAGCATACCCCCTGTTCTAAAAGCTGAGCTGCTGAAGACACTCGCTGCCTTTGGAAAGTCCCCTGAAATTGCAGCCTCCTTGTGGCAGTCGCTGGAATATACACAGATACTACAGACCATCAGGGTTTCAAGCCAGAGGCAAGCTATTGGGATCGAGGTTGAACTGAATGAAATAGAATCACGGTGTGAAGAATACCCCTTGACTCGAGCCTTTTGCCAGCTTATTAGTACCCTGGTGGAGAGCTCATTTCCTTCCAATTTGGGCGCTGGTCTGCGGCCCCCTGGCTTTGACCCTTATTTGCAGTTCCTTAGAGATTCTGTTTTTCTCCGATTCCGCACCAGAGCTTACCGGAGAGCAGCTGAAAAGTGGGAAGTTGCTGAGGTTGTTTTGGAGGTGTTTTATAAATTACTCAGAGATTATGAGCCTCAGCTTGAAGATTTTGTGGACCAGTTTGTGGAGCTACAAGGAGAAGAAATTATGGCCTACAAATTGCCTGGCTTCAGTCTGATGTATCATCTTCTGAACGAGTCACCAATGCTGGAGCTTGCTCTTAGTCTGCTGGAAGAAGGAGTAAAGCAGCTTGATACCTACGCCCCCTTTCCTGGGAAGAAACACCTGGAGAAAGCTGTAGAGCATTGCCTTGCACTTCTCAACCTTACTCTGCAGAAGGAAAATCTCTTTATGGATCTTCTAAGAGAAAGTCAGCTGGCTCTCATAGTTTCTCCCTTAGAGCAGCTGCTGCAGGGAATTAATCCCAGAACTAAGAAGGCAGACAACGTGGTAAACATTGCCAGATACCTGTATCATGGGAATACGAATCCAGAACTGGCTTTTGAAAGTGCCAAGATCCTCTGCTGTATCTCTTGCAATTCAAACATTCAGATAAAATTGGTTGGTGATTTCACACATGACCAGAGTGTAAGCCAGAAACTGATGGCTGGATTTGTGGAATGTTTGGATAATGAAGATGCAGAAGAATTTGTACGTCTGGAAGAGGGATCAGAGCTTGAAAAAAAATTAGCTGCAATTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTTATAACCTCTCTGGAACGTAGTCCACCCAACCTTGCTCTCTACCTGTTGGGCTTTGAATTGAAGAAACCTGTCAGTACCACTAACCTGCAAGATCCAGGAGTGCTAGGTTGCCCTCGGACATGCCTGCATGCCATCTTAAACATCTTGGAGAAAGGCACAGAAGAGAGAATGGGCCCAGCAGCAACTCCAAAGTCTCCTCAGCTGGCCGAGCTGTGTTACCAGGTGATATATCAGTTATGTGCATGCTCTGATACTTCTGGTCCTACCATGAGGTACTTAAGAACCAGCCAGGATTTCTTATTTTCTCAGTTGCAGCATCTGCCTTTCTCTAACAAAGAATATGAAATCTCTGTGCTGAATCAAATGTCATGGCTTATGAAAACTGCCTCAATAGAACTCAGAGTGACTTCTCTGAATCGTCAGCGGTCACATACCCAGAAACTCCTTCACCTCCTACTGGATGACATGCCAGTGAGACCATACTCAGATGGTGAAGGAGGAATGGAAGATGAAAATAGGTCTGTCTCTGGGTTCCTTCATGTTGACACTAGCACAAAAGTACGTCGAAAAATTCTAAGTATTCTTGACTCAATTGACTTCAGTCAAGAGATTCCTGAGCCTTTACAGTTGGATTTTTTTGATCGGAACCAGATCGAGCAAGTTATTGCTAACTGTGAACACAAGAATGTACGGGGACAGACAGTCTGCAATGTCAAGCTTCTTCATAGAGTTCTGGTGGCTGAAGTAAATGCTCTTCAGGGTATGGCAGCCATAGGACAGAGACCTTTACTCATGGAGGAAATTAGCACTATTCTGCAGTACGTGGTGGGAAGAAACAAATTGTTGCAGTGCCTGCATGCGAAGAGGCATGTCCTGGAGTCATGGAGGCAGCTGGTGGAAATCATCCTGACAGCTTGTCCCCAGGACCTCATTCAGGCCGAGGATCGACAGCTGATTATTCGTGATATTTTACAGGATGTACATGATAAGATCCTAGATGATGAAGCAGCACAGGAACTTATGCCAGTGGTCGCAGGCGCTGTGTTTACCCTGACTGCTCACCTGAGCCAGGCCGTGTGCACAGAGCAGAAGCAGCTGTTGGTCTCAGGGTCCGGAGAGGCCCACTACGCGCTCATGCTCGAGAGCTCTTTCTCCTCACCTCCTCCAGCAGAAAACCCGCTGGTGGGTTTTCCTTCTTCTGTTGAAGATTCTTCACTGCACATCATATTGAAGAAACTGTTAGACTTCATATTGAAGACAGGTGGTGGATTCCAGCGAGTGAGGACTCATCTGTATGGCTCTCTGCTTTATTACTTACAGATTGCCCAGAGACCAGATGAACCAGACACCTTAGAAACAGTTAAGAAAACCATGTGGGAAAGGCTGACAGCCCCTGAAGATGTGTTTAGTAAACTGCAGCGAGAAAACATTGCCATTATTGAGAGTTATGGAGCTGCCCTCATGGAAGTAGTCTGTCGTGATGCTTGTGACGGTCATGAGATTGGAAGGATGCTGGCCCTGGCACTCCTTGATCGGATTGTGTCTGTGGATAAACAGCAGCAATGGCTTCTGTACCTTTCCAACAGTGGCTATTTGAAGGTCCTCGTGGATAGCTTGCTAGAAGACGACCGTACTCTGCAGAGCTTGCTAACTCCACAACCTCCCCCTTTAAAAGCCCTTTACACTTATGAGTCCAAAATGGCATTTCTTACGAGAGTAGCTAAGATACAACAAGGTGCGTTAGAGCTGCTGAGGTCTGGGGTGATTATGAGGCTGGCACAGTGCCAAGTCTACGACACGCGCCCAGAAGTGGACCCACATGGCATGTTTGGCACGAGAGACTCCCCAATGTTCATCCCTACACCCGTGGATCGCTACCGTCAGATTCTCCTCCCTGCCCTCCAGCTGTGCCAGGTGGTCCTCACATCCAGTACGGCGCAGCACTTGCAGGCCGCAGGGCAGGTGTTGCAGTTTCTCATTTCGCATTCTGATACCATTCAAGCCATTCTGCGTTGCCAGGACATGAGTGCTGGCTCTTTGCAGGAACTGGCTCTGCTTACCGGAATTATAAGCAAAGCAGCACTTCCTGGTATATTAAGTGAACTTGATGTGGATGTAAACGAAGGATCTCTAATGGAGCTCCAGGGCCATATTGGAAGATTTCAGCGCCAGTGTTTGGGACTGCTAAGTCGCTTTGGTGGTTCTGATAGACTGCGTCAGTTTAAATTCCAAGATGATAATGTGGATGGAGACAGAGTGAGCAAGAAAGATGAGGTTGAGCTGGCCATGCAGCAGATTTGTGCCAATGTAATGGAGTATTGTCAGTCACTCATACTCCAGAGCTCCCCTAGCCTCCAGCACATTGTATGTCTCTTCACCCCTAGCCTTTCAGAAAGCATTAACAGAGATGGACCACGCCAAGATACCCAAGCTCCAGTGGTTCCATATTGGCACCTTCCTGGTTTGGGCATTATTGTCTACCTGCTGAAACAGAGTGCCAATGATTTCTTCAGCTATTATGACAGTCACCGACGCAGTGTCAACAAGCTTCAGAACGTAGAGCAACTTCCCCCGGATGAGATAAAAGAGTTGTGTCAGTTTGTGATGCCTGGTGGTGTTGATAAAATCTCCACTACCCAGAAATATGTTCTGGCAAAACGGTGCTTAGTGAAGCTGATCAACAATCGAGCCAAACTGCTTTCCTTGTGTTCTTATATCATAGAGACCTGCCTTTTTGTTCTTTGGCGCCACCTGGAGTACTACATGTTACACTGCTCACCCATGAATTCCCAAGATTCCTTATTTGCCTCCAGACCCTTATTTAAAAGCAGAAGACTACAAGATTCCTTGCCCACAGAAACCAGTCTGGATTTTAGAATTGGGCCAACTGTAGTGAGCCAACATGATATAGAGCAGCTTCAGGCTGATGCCATCAACGCATTTGGAGAATCACTACAAAAGAAGCTTTTGGACATCGAAAGATTATATTCAAAAGTCCGATCTCGCTATAGTTTCATACAGGCTCTTGTCAGGCGTATTGGCGGCCTACTGAGGTTATCAAGGAATTGA

Related Sequences

XP_004851408.1 Protein

Nup205 PREDICTED: nuclear pore complex protein Nup205 [Heterocephalus glaber]

Length: 1994 aa      View alignments
>XP_004851408.1
MDNPQEGWETGNSRRSLRRPPRCRLPRSLFLVPTPRAAAFSRETTKRVSRAKLFRTRPDCFSESDLYGRERLSAFAASLWGPYKDIWQTVGNALWRRQPEAVHLLDMILKKHRPDFISLFKNPPKNVQQHEMIQKASIEGVAIQGQQGTRPLPEKLIKEAFILSDLFDIGELAAVELLLAGEHQQPHFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRQGKTWTLELSPELISITTRFTDELMEQGLTYKVLTLVSHIDVNNEFEKLQRDRGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSPLGKDDTLLLIGHLEGVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDVIHQLPLLSERQYIATIHSRLQDSQPWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADETMAELAVADNVFLFLTESVVATENFYQEEFYLRRTHNLITDFLALMPMKVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLASIIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIAASLWQSLEYTQILQTIRVSSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLEDFVDQFVELQGEEIMAYKLPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKKHLEKAVEHCLALLNLTLQKENLFMDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIARYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSVSQKLMAGFVECLDNEDAEEFVRLEEGSELEKKLAAIRHETRIHILNLLITSLERSPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILNILEKGTEERMGPAATPKSPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQDFLFSQLQHLPFSNKEYEISVLNQMSWLMKTASIELRVTSLNRQRSHTQKLLHLLLDDMPVRPYSDGEGGMEDENRSVSGFLHVDTSTKVRRKILSILDSIDFSQEIPEPLQLDFFDRNQIEQVIANCEHKNVRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTILQYVVGRNKLLQCLHAKRHVLESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVCTEQKQLLVSGSGEAHYALMLESSFSSPPPAENPLVGFPSSVEDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDTLETVKKTMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLKVLVDSLLEDDRTLQSLLTPQPPPLKALYTYESKMAFLTRVAKIQQGALELLRSGVIMRLAQCQVYDTRPEVDPHGMFGTRDSPMFIPTPVDRYRQILLPALQLCQVVLTSSTAQHLQAAGQVLQFLISHSDTIQAILRCQDMSAGSLQELALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVDGDRVSKKDEVELAMQQICANVMEYCQSLILQSSPSLQHIVCLFTPSLSESINRDGPRQDTQAPVVPYWHLPGLGIIVYLLKQSANDFFSYYDSHRRSVNKLQNVEQLPPDEIKELCQFVMPGGVDKISTTQKYVLAKRCLVKLINNRAKLLSLCSYIIETCLFVLWRHLEYYMLHCSPMNSQDSLFASRPLFKSRRLQDSLPTETSLDFRIGPTVVSQHDIEQLQADAINAFGESLQKKLLDIERLYSKVRSRYSFIQALVRRIGGLLRLSRN