Sequence details NCBI ID: XM_004851347.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Raph1
Gene Name Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Entrez Gene ID 101700066

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAPH1 ENSCPOG00000020239 (Guinea pig)

Gene Details

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015694, Guinea pig)

Protein Percentage 95.67%
CDS Percentage 92.67%
Ka/Ks Ratio 0.10113 (Ka = 0.0243, Ks = 0.2405)

RAPH1 ENSG00000173166 (Human)

Gene Details

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000316543, Human)

Protein Percentage 91.29%
CDS Percentage 87.57%
Ka/Ks Ratio 0.12825 (Ka = 0.052, Ks = 0.4051)

Raph1 ENSMUSG00000026014 (Mouse)

Gene Details

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027168, Mouse)

Protein Percentage 92.01%
CDS Percentage 87.11%
Ka/Ks Ratio 0.09608 (Ka = 0.0496, Ks = 0.5162)

Raph1 ENSRNOG00000014722 (Rat)

Gene Details

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 (Raph1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033491, Rat)

Protein Percentage 88.1%
CDS Percentage 84.27%
Ka/Ks Ratio 0.13263 (Ka = 0.0728, Ks = 0.5486)

Genome Location

Sequence Coding sequence

Length: 3714 bp    Location: 12922081..12988942   Strand: +
Raw sequence   
>XM_004851347.1
ATGTCTGTATTTCAGATGGAGCAACTATCAGATGAAGAAATTGATCATGGTGCTGAAGAAGACAGTGACAAAGAAGATCAGGACCTGGACAAAATGTTTGGAGCCTGGCTTGGGGAACTGGACAAACTCACGCAGAGTTTGGATTCTGACAAGCCTGTAGAACCAGTGAAAAGATCTCCTCTTCACCAGGAAACAAACATGGCCAATTTTTCTTACCGTTTCTCCATATACAACTTGAATGAAGCTCTGAATCAAGGAGAGACTGTGGATCTGGACGCATTGATGGCAGATCTTTGCTCAATAGAGCAGGAGCTCAGCAGTATTGGTTCAGGAAGTAGTAAGCGACAAATCACAGAAACAAAAGCTACTCAGAAGTTACCTGCTAGCCGACATCCATCAAAACATGGCACCTTGAAAGGACTATCTTCTTCGTCTAATAGGATAGCTAAACCTTCCCATGCTAACTATTCCCTGGATGACATCACTGCACAGTTAGAACAGGCCTCCTTGAGCATGGACGAGGCTGCTCAGCAGTCTGTACTGGAAGACACTAAGCCGATAGTAACTAATCAGCACCGAAGAACTGCATCTGCGGGCACGGTGAGCGATGCTGAAGTGCACTCTATTAGTAACTCCTCTCGTTCTAGCATCACTTCTGCAGCCTCCAGTATGGACTCTTTGGATATTGATAAAGTGACACGCCCTCAGGAACTGGATTTAACACATCAGGCACAGTCAATTACTGAGGAAGAACAGGCAGCAAAGTTGAAAGCTGAGAAGATCAGAGTTGCCCTGGAGAAAATTAAAGAGGCACAAGTGAAAAAGCTGGTGATTAGAGTCCACATGTCTGACGATAGTTCAAAAACAATGATGGTGGATGAGAGGCAGACAGTGAGACAAGTGCTGGATAACCTGATGGACAAATCCCACTGTGGTTATAGTTTAGACTGGTCGCTGGTGGAAACCATTTCTGAGTTACAAATGGAGAGAATCTTTGAAGACCATGAAAACTTGGTTGAAAATCTTCTCAATTGGACAAGAGACAGCCAAAACAAGCTTATATTTATGGAGCGTATAGAAAAATATGCATTATTTAAAAACCCACAAAATTATCTTCTAGGTAAAAAGGAAACAGCTGAGATGGCAGATAGAAACAAAGAAGTACTGCTGGAGGAATGCTTCTGTGGAAGTTCTGTAACTGTACCAGAAATTGAAGGAGTCCTTTGGTTGAAAGATGATGGCAAAAAATCCTGGAAAAAGCGATACTTTCTCTTGCGAGCATCTGGTATCTACTACGTCCCTAAAGGAAAAGCAAAGGTCTCTCGGGATCTGGTGTGCTTTCTCCAGCTGGATCATGTCAATGTTTACTATGGCCAGGACTATCGGAACAAATACAAAGCACCTACAGACTATTGTCTGGTCCTAAAGCACCCACAGATCCAGAAGAAATCTCAGTATATCAAATACCTCTGCTGTGATGATATGAGGACCCTGCATCAGTGGGTCAATGGGATCCGCATTGCAAAGTACGGAAAGCAGCTCTACTCGAACTATCAAGAAGCCGTGAAGAGGACGGAGTCTGCCTATGACTGGACATCCTTATCCAGCTCCAGTATTAAATCAGGATCCAGTTCTTCCAGCATCCCAGAGTCTCAGTCTAATCACTCTAACCAGTCTGATAGTGGAGTCTCTGACACCCAGCCAGTGGGACATATCCGCTCCCAGAGCATCGTGAGCTCCATCTTCTCCGAAGCCTGGAAGCGAGGCACTCAGCTAGAGGAGTCCAGCAAGGCCAGAATGGAATCCATGAATCGGCCCTACACTTCACTCGTGACCCCTCTGTCCCCACAGACTAAGATGGTCACCCCCTATGCTGCTTCCCAGCCCTCGCCCCCTCCCAGCCAGTCTGCACCTTCTTCGGGCTCCTCAGCCACCATGTTCGTCAAGTACAGCACAATCACAAGGCTGCAGAATGCATCTCAGCATTCAGGGTCCCTGTTTAAGTCTCCACCACCTCCAGGAATGCAGCCACTGCCCTTTGCCTCACAGGCTGTCAAACCTCAGATCCTGGTGCCCCCCAGTGGTGATGTTCCACCACCGCCACCCCCTCCACCCCCCCCCACTCCTGGCTCAGCTATGGCCCAGCTAAAGCCAGCACCTTGTGCCCCGTCCCTTCCCCAATTCAGCCCCCCACCTCCTCCTCTGAAGATCCATCAAGTCCAACACAGTACTCAGGCCGTGGCTCCCACACCCCCGCCGGCTCCTCCCATCCCTGCAGCCCTCCCTCCGCAGGCCCCCCCCAAGCCCCTCCTCGCCATGCCCCCACCAGTCAGCACCAAGACTGTGCCACTTCCTGCACAGGCTGCACTACCCACCCCTGCCCCTGTACTGCCCCCAGCAAAGAAACAGCCCCCGTTCCCTCTTTCTCAGGTTCCACCCTGTCCCCCTGCTACTCCTTCCCCGTGCCCCCCTCCCACGCTCCCCAAGCAGCAGAGCTTCTGTGTGAAGCCCCCTCCCTCCCCTTTGTCCCCCGTGCCCTCTGTGCCCTCCGTCGTAAAGCAGATCGCCAGCCAGTTCCCACCTCCTCCTGCTCCTGCCGAGTCCCAGCCCCTGAAGCCCAGCCCAGCCCATGTCACGATGCAGTCCCCTCCTGCTGTGAAAGCAAAGCCCAAGTGGCAGCCCAGCGCCATTTCTGCCCCTTCTGCCATCCCTGCCCCTTCTCCGGACTTCCCTCCTCCCCCTCCGGAAAGTAGCCTGGTGTTTGCTCCTCCTCCACCACCACCGGCCCCAGCCCCACCACCAGTGCCAGCCACAGCTTCCTCTACCCCTGATAAAGGTGGATCCCCGGGGAAGAAGCCCAGTAGGATGTCCAGCCCTGGGGGCAAGAAGCCACCCCCGACGCCGCAGCGCAACTCCAGCATCAAGTCTGGCAGCGGCACTGAGCAACCTGAGCCCAAAAGGCCCTCGGTGGACAGTCTGGTAAGCAGGTTTGCCCCGCCTGCGGAAGAGACCCCACCGCCACCCACAGCACCACCCAAGCCCGGGAAGCTGCATCTCTCTGGAGCCGGCTTCCCTAGCGTCCTCCAAGGGGCAGCGCCCGCAAAACCTCCGGTGCTGAGTGGGCGCGGAAAGGACTGCATGGTAGAATTTCCTTCTCCGCCATCAGATTCTGACTTTCCACCCCCTCCACCTGAAACTGAGCTTCCTCTGCCCCCCATCGAGATCCCACCCGTATTTTCAGGAAACACTTCACCCAAAGTGGCAGTTGTTAATCCTCAGCCACAGCCATGGTGTAAAATGTCAGTGAAGAAGGCTCCTCCGCCCACACGACCCAAGCGGAACGACAGTACCCGCCTCACGCAAGCAGAGCTCTCTGAGCAGCCACCAATGGCCACAGTTGTGCCACAAGTGCCCACATCTCCTAAGTCCAGCCTTAGTGTCCAGCCTGGATTCCTGGCTGACCTCAACAGGACCCTGCAACGGAAGTCCATCACCCGGCACGGCTCACTGTCCTCCTCCCGCACGTCCAGGGCAGAACCTACAGCCACCATGGATGATATGGCCTTGCCTCCGCCACCCCCCGAACTGCTCTCCGATCAACAGAAGGCCGGCTACGGGGGTAGTCATATATCAGGCTATGCAACCTTGCGGAGAGGACCCCCTCCCGCTCCCCCCAAAAGAGACCAGAACACCAAGCTCTCCAGAGACTGGTAG

Related Sequences

XP_004851404.1 Protein

Raph1 PREDICTED: ras-associated and pleckstrin homology domains-containing protein 1 [Heterocephalus glaber]

Length: 1237 aa      View alignments
>XP_004851404.1
MSVFQMEQLSDEEIDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDSDKPVEPVKRSPLHQETNMANFSYRFSIYNLNEALNQGETVDLDALMADLCSIEQELSSIGSGSSKRQITETKATQKLPASRHPSKHGTLKGLSSSSNRIAKPSHANYSLDDITAQLEQASLSMDEAAQQSVLEDTKPIVTNQHRRTASAGTVSDAEVHSISNSSRSSITSAASSMDSLDIDKVTRPQELDLTHQAQSITEEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHMSDDSSKTMMVDERQTVRQVLDNLMDKSHCGYSLDWSLVETISELQMERIFEDHENLVENLLNWTRDSQNKLIFMERIEKYALFKNPQNYLLGKKETAEMADRNKEVLLEECFCGSSVTVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDMRTLHQWVNGIRIAKYGKQLYSNYQEAVKRTESAYDWTSLSSSSIKSGSSSSSIPESQSNHSNQSDSGVSDTQPVGHIRSQSIVSSIFSEAWKRGTQLEESSKARMESMNRPYTSLVTPLSPQTKMVTPYAASQPSPPPSQSAPSSGSSATMFVKYSTITRLQNASQHSGSLFKSPPPPGMQPLPFASQAVKPQILVPPSGDVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSPPPPPLKIHQVQHSTQAVAPTPPPAPPIPAALPPQAPPKPLLAMPPPVSTKTVPLPAQAALPTPAPVLPPAKKQPPFPLSQVPPCPPATPSPCPPPTLPKQQSFCVKPPPSPLSPVPSVPSVVKQIASQFPPPPAPAESQPLKPSPAHVTMQSPPAVKAKPKWQPSAISAPSAIPAPSPDFPPPPPESSLVFAPPPPPPAPAPPPVPATASSTPDKGGSPGKKPSRMSSPGGKKPPPTPQRNSSIKSGSGTEQPEPKRPSVDSLVSRFAPPAEETPPPPTAPPKPGKLHLSGAGFPSVLQGAAPAKPPVLSGRGKDCMVEFPSPPSDSDFPPPPPETELPLPPIEIPPVFSGNTSPKVAVVNPQPQPWCKMSVKKAPPPTRPKRNDSTRLTQAELSEQPPMATVVPQVPTSPKSSLSVQPGFLADLNRTLQRKSITRHGSLSSSRTSRAEPTATMDDMALPPPPPELLSDQQKAGYGGSHISGYATLRRGPPPAPPKRDQNTKLSRDW