Details from NCBI annotation

Gene Symbol Abca12
Gene Name ATP-binding cassette, sub-family A (ABC1), member 12
Entrez Gene ID 101720431

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCA12 ENSCPOG00000005978 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005396, Guinea pig)

Protein Percentage 91.58%
CDS Percentage 90.87%
Ka/Ks Ratio 0.1777 (Ka = 0.0466, Ks = 0.2625)

ABCA12 ENSG00000144452 (Human)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000272895, Human)

Protein Percentage 88.61%
CDS Percentage 88.19%
Ka/Ks Ratio 0.17534 (Ka = 0.0633, Ks = 0.361)

Abca12 ENSMUSG00000050296 (Mouse)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084523, Mouse)

Protein Percentage 86.22%
CDS Percentage 83.85%
Ka/Ks Ratio 0.14051 (Ka = 0.0815, Ks = 0.5799)

Abca12 ENSRNOG00000015248 (Rat)

Gene Details

Protein Abca12

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054481, Rat)

Protein Percentage 87.8%
CDS Percentage 84.02%
Ka/Ks Ratio 0.11947 (Ka = 0.0737, Ks = 0.6166)

Genome Location

Sequence Coding sequence

Length: 7593 bp    Location: 1010287..1197910   Strand: +
>XM_004851334.1
ATGGCTTCCCAGCTTCATCAGCTCCGGGTCCTGGTGTGGAAAAACTGGCTAGGTGTCAAAAGGCAGCCGTTTTGGACACTTGTCTTGATCTTATGGCCAGTCATTATTTTCATCATTTTGGCTATTACTCGGACGAAATTTCCTCCAACAGCAAAACCAACTTGTTACCTCGCACCTCGAAACCTTCCTAGTACTGGATTCTTTCCATTTCTACAAACTCTACTCTGCGACACAGACTCTAAGTGCAAAGATACCCCCTACGGGCCACAAGATCTGCTTCGCAGAAAAGGGATCAATGATGGACTGTTTAAAGACAGTGAACTTATGAAAAAATCATCCAACCCAAAGAAGAACAGCAATTTACCACTGCAGAGCACCCAAGTTCCCGACAGAAGTCATCCATCGCTGGCCACAGTATTTCCCAGTCCAAGTTCTGATTTGGAAACTACTGGAACAATAACTTTCAATGGTAGTCAAGTGCTTGAATGGATCCTTGGTTTGGAAAAGCTGATAAACAAAAATTCAACCTCAGAAGATGTACGAAAAGAACTGTGTGAGAGCTATCCAGGACACAGGGCAGATTATACCTTCTCTTGGACCGCTCTAGGAAAAAATATTTTAAATAAATTTTGCCTTTCCAACATGACACTTTTAGAGTCTTCTTTCCAGGAAATAAAAGAACAGTTTTCTCAGGTATCAGGTGATCCCACTAACCAGAAGCTGGTGTTTCAGGATATGGTCAAAGTGCTGTCCTTCTTTTCAAAAGTGCAGGAGCAGACAGCCCTGTGGCAGCTACTCTCTAGTTTCCCAGATGTGTTTCAGAATGACACATCACCAGGCAATCTATTTGATGTTCTTCGAAAGGCAAATGGGGTGCTGCTGGCCCTGCAGAAGTTTTATCCCCGAGTTGAAACTAACGAAGGTTTCAGAACCCTTCAGAAGTCTGTTAAACATCTGCTCTACACCCTAGACTTCCCTACTCAAGAGTCATCTGAGAACACATCCTACGTGTGGGGCGAAGATGATGGATGGACACTGTCCCCAAGTAGTCTGGCTGCACAGCTCCTAATCCTGGAAAACTTTGAAGATGCTATCTTAAATATCTCATCCAATAGTCCTTACTTTCCTTACTTGGCGTGTGTGAGAAATGTGACTAACAATTTGGCCAGGGGATCACCAGAAAATCTAAGACTTCTGCAGTCCACAATTCGATTTAAAAAATCTTTTCTTCGAAATGGTTCCTATGAGGATTACTTCCCCTCAGTTCCTGAAGTCCTAAAATCAAAACTGTCTCAACTTCGAAACTTGACTGAGCTCCTTTGTGAATCAGAAACTTTCAACTCAATAGAGAAAGCCTGCTGGCTCTCTAATACGAGCTTTGGGAATCTGTGTGAAGACAGTGTGTTTCATCTGCAACTTCTTGAAGCAGCAGAGCTGGGCACTGACATCGCAACCAGCTTCCTGTACCATGACAATATTATATCTGAAAAACTGAGAAATTTGCTGACTGGAGACATAAACAAAATTAATTTGAATATGGATCGGTTCCTGGAACAGGCATTGCAAATGAATTACTTGGAAAATATCACACAGTTAATACCAGCCATTGAGGCCTTGCTGCATGTCAATAACAGCGCAGACACTTCCGAGCAGCCAGATCAGTTAATAGAAATGTTTAAAAATGTTGATGAACTGAAAGAAGAACTGAAGAGAGCAACAGGGATGTCCAACACAAGTATCGACAAGTTGCTAGCTATCCCTATCCCAGATAACAGAGTGGAGATTATTTCTCGAGTGTTCTGGTTGTATTCTTGTGATGCTAACAGCACCAACCCCAAACTGGAGGATGCGATGATGGAATTCTGCCGCCTGCCTCTCACAGAGAGGTCCCATCAGTCTTACCTCATTGGACTCACTCTTCTGCACTACTTGGACATTTACAGCTTCACGTACAAGGTGTTTTTCCCTAGGAAAGATCAAAAGCCAGTAGAAAAGATGTTTGAACTCTTCAGAAGGCTGAAAGAGATTCTCAATCAGATGGCTTCGGGAACACATCCGTTGCTAGACAAAATGAGATCCCTGAAACAAATGCACCTCTCCAGAAGTGCTCCATTAACACAGGAAATGTACAGAAGCAACAGAATGAATACACCCCAAGGATCATTTAGTACCATCTCTCAAGCACTATGTTCACAAGGAATTACCACTGAATATTTAACTGCTATGCTGCCCTCTTCCCAGAAGCCAAAAGGCAACCACACCAAGGATTTCTTGACATATAAATTAAGTAAAAAGCAAGTTGCTGCAAAATATGGAATTCCCTTACATACTACACCATTTTGCTTCTCCCTTTATAAAGACATCATTAACATGCCCGCTGGACCTGTGATTTGGGCTTTCTTGAAACCAATGTTGTTGGGAAAGATTTTATATGCACCATACAACCCAGTCACAAAGGCCATCATGGAAAAGTCTAATGCGACTCTGAGACAGCTGGCAGAATTAAGAGAAAAATCTCAAGAGTGGGTGGATAAGTCACCAATTGTCATGAATTCCTTCTATCTGATGAACCAAGCAATTCCAATGCTTCAGAATACTCTAAAAAATCCCTTTGTGCAAGTGTTTGTAAAGTTCTCCGTGGGACTTGACGCTGTTGAACTACTGAAACAGATAGAAGAACTTGACACTCTCAGGATGACATTAAAAAACAACATTGACGTCATTGATCAGCTTAACACACTGTCTTCTCTGACAGTAAATATTTCCTCTTGTGTATTGTATGACCGTATTCAGCCAGCAGAAACCATAGATGAAATGGAGAGAGAAGCTAAAAGGCTCTACAAAAGCAATGAGCTCTTTGGAAGTGTTATTTTTAAGCTCCCTTCTAATAGAAGCTGGCACAGAGGCTATGACTCTGACAATGTCTCTCTTCCTCCTGTTGTGAAATATACCATCCGCATGAGTCTGAAGACTGCCCAGACAACAAGAAGCATAAGAACCAAGATTTGGGCTCCGGGTCCCCACAACTCTCCATCACACAACCAGATCTATGGCAGGGCTTTTGTTTATTTACAGGACAGTATTGAAAGAGCAATCATTGAATTGCAAACAGGAAGAAATTCACAGGAAATAGCTGTCCAGGTTCAAGCAGTTCCTTATCCCTGCTATATGAAAGACAACTTCTTAACCAGTGTCTCTTATTCTCTTCCAATTGTACTCATGGTTGCCTGGGTTGTATTTATAGCTGTTTTTGTAAAAAAGCTTGTTTATGAGAAAGACCTCCGGCTTCATGAGGCCTCTGAAATTAGGATTCATGTGATAGACTGTCACGATTTAGTTGGCAGTGATTTTTCTTTCTCAGTGGTGTATAAAATAGTGGCATATCTTAAAATCAACAGTTTTCTAAATTCAAAAGAGGACAGTAGCCTGCTGTCCCCAACAGCATTCAGCTATGCGAGCCAATATATTGCACGATATGAGGAACAAGGCATTGGTCTTCATTGGGAAAATATGTACAGCTCCCCAGTCCAGGATGACACCACATCATTTGGCTGGCTATGCTGTCTGATCCTAGCTGACTCTTTCATCTACTTCTTTATTGCTTGGTACATCAGGAACGTTTTCCCAGGAACATATGGTATGGCTGCTCCCTGGTATTTTCCAGTTCTTCCTTCCTATTGGAAGGAGCGGTTCGGATGTGCAGAGGTGAAGCGTGAGAAAAGCAACGGCCTTATGTTTACCAATATCATGATGCAGAACACCAGCCTATCTGGCAGCCCTGAACACATGTTTCCCTCCAACATTGAGCCAGAACCCAAAGATCTCCCAGCTGGTGTTGCCCTGCATGGAGTAACAAAGATCTATGGTACAAAAGTTGCTGTTGATAACCTCAATCTGAACTTTTATGAAGGCCATATTACTTCATTGCTGGGACCAAATGGAGCTGGAAAAACTACTACCATCTCTATGTTAACTGGGCTGTTTGGTGCCTCAGCTGGTACCATCTTTGTGTATGGGAAAGATATTAAAACAGACCTCAACACTGTTCGGAAGAACATGGGAGTGTGCATGCAGCACGATGTCTTGTTCAGTTATCTTACTACTAAGGAACATCTTCTTCTATATGGCTCCATCAAAGTTCCTCATTGGACTAAGAAACAGCTCCATGAAGAAGTAAAAAAGACTTTAAAAGAAACTGGACTGTATACCCATCGGCATAAGAGAGTTGGAACACTGTCAGGAGGAATGAAGAGGAAATTATCTATCTCCATTGCTCTTATTGGTGGATCAAGGGTTGTGATTTTGGATGAACCATCCACTGGAGTTGACCCATGTTCACGCCGAAGTATATGGGATGTAATATCCAAGAACAAAACTGCCAGAACAATCATTCTGTCCACTCACCACTTGGACGAGGCTGAAGTGCTGAGTGACCGTATTGCCTTCCTGGAGCAGGGTGGGCTCCGATGCTGTGGGTCGCCATTTTACCTCAAGGAAGCATTTGGAGATGGGTATCACCTCACACTCACTAAGAAGAAGACTCCAAGTCTAGATACAAGTACAACATGTGACACAGTGGCCGTGACAGCAATGATCAGATCCCACCTTCCTGAAGCCTACCTCAAGGAGGACATTGGAGGAGAGCTTGTTTATGTGCTTCCTCCATTTAGTACCAAAGTTTCGGGAGCCTATCTGTCACTTCTAAGAGCACTGGACCAGGGCATGGGTGACCTCAACATAGGGTGCTATGGCATTTCAGACACCACTGTCGAAGAGGTCTTTCTGAACTTAACCAAAGAGTCGCAAAAAAATGGTGGTATGAGTCTTGAGCACTTAACACAACGGAAAATTGGGAATTCCAATACCAAGGGCATCTCAACTCCTGATGACTTATCCGTGAGCAGTAGCAACTTCACAGACAGAGATGACAAAGTCCTGACCAGTGGAGAGCGGCTGGATGGTTTTGGACTGTTGCTGAAGAAGATAGTGGCCATTCTTATCAAGCGGTTCCACCACACCCGCAGGAACTGGAAAGGACTCATTGCACAGGTGGTCCTTCCCATTGTCTTTGTGATCACTGCCATGGGCCTTGGCACACTGCGTGCTTCCAACAACAGTTACCCAGAGATCGAGATCTCCCCCTCTCTTTATGGTGCCTCTGAACAGACAGCCTTCTATGCGAATTATGACCCAAGTACAAAACCTCTGGTCTCAGCAATGTGGGACTTCCCTGGCATTGACAACATTTGTCTGAACAGCAGTGATTCACGGTGTTTAAAGGAAAATAGTCTGAACAGCTGGAACACCAGTGGAGAGCCTATCACTAATTTTGGTGTTTGCTCCTGCTCAGAAAATGTCCAGGAATGTCCTAAGTTTAATTATTCACCACCTCATAGAAGAACCTATTCTTCCCAAGTGATTTATAATCTTACTGTTACTGGGCGCCACATGGAAAATTATCTGATATCAACTGCCAATAAATTTTCCCAAAAAAGATATGGAGGTTGGAGTTTTGGTCTGCCTCTGACTAACGACCTTCGTTTTGATGTGACAGCAGTTCCTGCCAATAGAACACTTGCCAAGGTGTGGTATGACCCTGAAGGCTATCACTCTCTTCCAGCTTACCTCAACAGCCTGAATAATTTCCTCCTGCGAGTTAACATGTCAAAGGTTGATGCCGCCAAGCATGGGATCATCATGTATAGCCAGCCTTATCCAGGCGTGCAAGACCAGGAGCAAGCCACAATCAGCAGTTTAATCGATATTTTAGTGGCACTGTCCATCCTGATGGGCTATTCTGTCACCACCGCCAGCTTTGTCACCTATGTTGTAAGGGAACATCAGACCAAAGCCAAGCAGTTGCAACACATTTCAGGCATTGGTGTGACATGCTATTGGGTAACAAACTTCATTTATGACATGGTCTTCTACTTAGTCCCTGTAGCATTTTCAATTGGTGTCATTGCAATATTCAAGTTACCTGCCTTCTACAGTGAAAGCAACCTGGGTGCTGTATCTCTCCTTCTTCTGCTGTTTGGATATGCAACATTTTCTTGGATGTACTTGCTGGCTGGTTTCTTCCATGAAACAGGGATGGCCTTCATCACTTATGTCTGTGTCAACCTGTTTTTTGGCATCAATTCTATTGTTTCCCTGTCCGTGGTTTACTTTCTTTCCAAGGAAAAGCCTAATGATCCGACTTTGGAACTTATTTCTGAGACCCTCAAGCAAATTTTCCTGATTTTCCCACAATTCTGTTTCGGCTATGGTTTGATTGAACTTTCTCAACAACAATCAGTTCTGGACTTCTTAAAAGCATATGGAGTGGAATACCCACATGAAACCTTTGAAATGGATAAACTAGGGGCAATGTTTGTGGCTTTGGTTTCTCAGGGAACCATGTTTTTTTTGTTGCGACTCTTAATCAATGAGTGGCTAATAAAAAAACTCAGGCTCTTCATCAGAAAATTTAGTTCTTCGTCTGTAATGGAGATAACAGATGAGGATGAGGATGTGCGGGCTGAGAGACTAAGAGTCGAGAGTGGTGCAGCTGAGCTTGATCTGGTCCAACTCCATCGTCTCACAAAGACCTACCAACTTATCCACAAGAAGATTATAGCTGTAAACAACATCAGCATCGGGATACCTGCAGGAGAATGCTTTGGCCTTCTTGGGGTGAATGGAGCAGGCAAGACCACTATATTCAAGATGCTTACTGGAGACATTGTTCCTTCAAATGGAAACATTCTGATCAGAAATAAGACAGGATCTCTGGGTCATGTTGACTCTCACAGCTCATTAGTTGGTTACTGCCCTCAGGAAGATGCCTTAGATGATCTAGTAACTGTGGAAGAACATTTGTATTTCTACGCCAGAGTCCATGGAATTCCAGAAAAAGATATCAAAGAAACTGTTCATAAACTCCTTAGGAGACTTCACTTGATGCCCTACAAGGACAGATCCACCTCTATGTGCAGTTATGGAACAAAAAGAAAATTATCCACTGCTCTGGCCTTAATAGGGAAACCTTCCATTCTACTACTGGATGAGCCGAGCTCTGGGATGGATCCTAAGTCAAAACGGCACCTCTGGAAGATCATTTCAGAGGAAGTACAGAACAAGTGTTCCGTCATCCTCACATCTCACAGCATGGAAGAATGTGAAGCTCTTTGTACCAGGCTGGCCATTATGGTGAATGGAAGATTCCAGTGCATTGGATCTTTGCAGCACATAAAGAGCAGGTTTGGACGTGGGTTTACTGTGAAGGTTCATTTAAAGAATAGCAAAGTGAGCATGGAGACTCTCACAAGGTTCATGCAACTGCACTTTCCAAAAACATATTTAAAAGATCAACACCTTAGCATGCTAGAGTACCATGTACCAGTCACTGCAGGAGGAGTAGCAAACATTTTTGATCTACTAGAAACCAACAAGGCTGCTTTAAATATCACAAATTTCCTAGTGAGTCAGACTACTCTGGAAGAGGTTTTCATCAACTTTGCCAAAGATCAAAAGTCCTATGAAAATGCTGACACAAGCAGCCAAGGTTCCACTATAAGTGTGGACTCACAGGATGACCAGATGGAGTCTTAG

Related Sequences

XP_004851391.1 Protein

Abca12 PREDICTED: ATP-binding cassette sub-family A member 12 [Heterocephalus glaber]

Length: 2530 aa      View alignments
>XP_004851391.1
MASQLHQLRVLVWKNWLGVKRQPFWTLVLILWPVIIFIILAITRTKFPPTAKPTCYLAPRNLPSTGFFPFLQTLLCDTDSKCKDTPYGPQDLLRRKGINDGLFKDSELMKKSSNPKKNSNLPLQSTQVPDRSHPSLATVFPSPSSDLETTGTITFNGSQVLEWILGLEKLINKNSTSEDVRKELCESYPGHRADYTFSWTALGKNILNKFCLSNMTLLESSFQEIKEQFSQVSGDPTNQKLVFQDMVKVLSFFSKVQEQTALWQLLSSFPDVFQNDTSPGNLFDVLRKANGVLLALQKFYPRVETNEGFRTLQKSVKHLLYTLDFPTQESSENTSYVWGEDDGWTLSPSSLAAQLLILENFEDAILNISSNSPYFPYLACVRNVTNNLARGSPENLRLLQSTIRFKKSFLRNGSYEDYFPSVPEVLKSKLSQLRNLTELLCESETFNSIEKACWLSNTSFGNLCEDSVFHLQLLEAAELGTDIATSFLYHDNIISEKLRNLLTGDINKINLNMDRFLEQALQMNYLENITQLIPAIEALLHVNNSADTSEQPDQLIEMFKNVDELKEELKRATGMSNTSIDKLLAIPIPDNRVEIISRVFWLYSCDANSTNPKLEDAMMEFCRLPLTERSHQSYLIGLTLLHYLDIYSFTYKVFFPRKDQKPVEKMFELFRRLKEILNQMASGTHPLLDKMRSLKQMHLSRSAPLTQEMYRSNRMNTPQGSFSTISQALCSQGITTEYLTAMLPSSQKPKGNHTKDFLTYKLSKKQVAAKYGIPLHTTPFCFSLYKDIINMPAGPVIWAFLKPMLLGKILYAPYNPVTKAIMEKSNATLRQLAELREKSQEWVDKSPIVMNSFYLMNQAIPMLQNTLKNPFVQVFVKFSVGLDAVELLKQIEELDTLRMTLKNNIDVIDQLNTLSSLTVNISSCVLYDRIQPAETIDEMEREAKRLYKSNELFGSVIFKLPSNRSWHRGYDSDNVSLPPVVKYTIRMSLKTAQTTRSIRTKIWAPGPHNSPSHNQIYGRAFVYLQDSIERAIIELQTGRNSQEIAVQVQAVPYPCYMKDNFLTSVSYSLPIVLMVAWVVFIAVFVKKLVYEKDLRLHEASEIRIHVIDCHDLVGSDFSFSVVYKIVAYLKINSFLNSKEDSSLLSPTAFSYASQYIARYEEQGIGLHWENMYSSPVQDDTTSFGWLCCLILADSFIYFFIAWYIRNVFPGTYGMAAPWYFPVLPSYWKERFGCAEVKREKSNGLMFTNIMMQNTSLSGSPEHMFPSNIEPEPKDLPAGVALHGVTKIYGTKVAVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGASAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKKQLHEEVKKTLKETGLYTHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKTPSLDTSTTCDTVAVTAMIRSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDQGMGDLNIGCYGISDTTVEEVFLNLTKESQKNGGMSLEHLTQRKIGNSNTKGISTPDDLSVSSSNFTDRDDKVLTSGERLDGFGLLLKKIVAILIKRFHHTRRNWKGLIAQVVLPIVFVITAMGLGTLRASNNSYPEIEISPSLYGASEQTAFYANYDPSTKPLVSAMWDFPGIDNICLNSSDSRCLKENSLNSWNTSGEPITNFGVCSCSENVQECPKFNYSPPHRRTYSSQVIYNLTVTGRHMENYLISTANKFSQKRYGGWSFGLPLTNDLRFDVTAVPANRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKVDAAKHGIIMYSQPYPGVQDQEQATISSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSESNLGAVSLLLLLFGYATFSWMYLLAGFFHETGMAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKQIFLIFPQFCFGYGLIELSQQQSVLDFLKAYGVEYPHETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFIRKFSSSSVMEITDEDEDVRAERLRVESGAAELDLVQLHRLTKTYQLIHKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIVPSNGNILIRNKTGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPYKDRSTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNSKVSMETLTRFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANIFDLLETNKAALNITNFLVSQTTLEEVFINFAKDQKSYENADTSSQGSTISVDSQDDQMES