Details from NCBI annotation

Gene Symbol Secisbp2
Gene Name SECIS binding protein 2, transcript variant X3
Entrez Gene ID 101713240

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SECISBP2 ENSCPOG00000014270 (Guinea pig)

Gene Details

SECIS binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012857, Guinea pig)

Protein Percentage 84.13%
CDS Percentage 88.15%
Ka/Ks Ratio 0.32432 (Ka = 0.0866, Ks = 0.2672)

SECISBP2 ENSG00000187742 (Human)

Gene Details

SECIS binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000364965, Human)

Protein Percentage 79.2%
CDS Percentage 84.59%
Ka/Ks Ratio 0.33698 (Ka = 0.1208, Ks = 0.3584)

Secisbp2 ENSMUSG00000035139 (Mouse)

Gene Details

SECIS binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045740, Mouse)

Protein Percentage 72.61%
CDS Percentage 78.87%
Ka/Ks Ratio 0.30601 (Ka = 0.173, Ks = 0.5654)

Secisbp2 ENSRNOG00000013773 (Rat)

Gene Details

SECIS binding protein 2 (Secisbp2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039532, Rat)

Protein Percentage 73.51%
CDS Percentage 79.75%
Ka/Ks Ratio 0.32803 (Ka = 0.1678, Ks = 0.5114)

Genome Location

Sequence Coding sequence

Length: 2547 bp    Location: 23296046..23246349   Strand: -
>XM_004851317.1
ATGGCGTCGGAGGGGCCGTGGGGGCCTGAAGGCACGGGCAACATCAAGTTATCAGCAGATGTGAAACCATTTGTCCCCAAGTTTTCTGGGCTCAGCATGGCATGGACAGAGTCTTCAGAAGCGTGTGTCTTCCCTAGCTGTGCAGCCACCTATTATCCATTTGTACAGGAACCACCAGTGACTGACCAGAAAATATATACAGAAGACATGGCCTTTAGAGCTTCACCATTTCCACCCCAGTATTTATCTTCGGAGATCACTCTCCATCCGTACGCCTACTCTCCATACACCCTTGAGTCTACACAGAATGTGTGCTCAGTGCCTGCCTCACAGTATGATTACAGCCAACCCAGTCATTATCGAGGTTTTCAGACTGCGAAGCCCCAAAATGAACACATGTGTGCTCTTCCACAAGAAACAAAAGCTCTGTTTAAGAAAAAAACCTGTGATGAGAAAAAAACATATGATGAACAAAAGTTTAAAAGGACTGATGGTACAGTATCATCTGAGATAAAGTCAACTAGAGGTTCCTACCATTTGTCCACTCATGCTGAGAACAGATTGAAACCAGATGGTTACCATAAGCGAACAGACAGGAAATCCAGAACCACTGAAAAAAGTCCATCTACCCCCACACCTGCGTTTGAATTTAGCAGGTTGGAATTTCCTGAATTGCAGGGTCCAGAGAACAGTATGTCAGGGATCCAGAAGCAGTGCCGATGGGGACCTCTCCGGTCCAACTCCACCATTTCTCGTGTAGGAAAAGTGGGAAAACCAGTTGGAGTGGTGTCTGGGGATGAGATAGTGATGAAAAATAACCCAGATGAATATGTGACTGATAATGCTGCTTCCAGTTCCCCATCATGTACAAGAGAGTTATCTTGGACACCAATGGGTTATATTGTTCGGCAGACATCTTCAGAACCCTCACCAGCTCCTAAAAATGTTACTTCTGTAATAAACCTAAAGACGGTTGTTTCATCAGCAGATCCTAAAAATGTTAGTGTGTCATCTTCTGAAGTTTTATCTTCAGATCCTTCCTACAACAAAGAGAAACATGTTCATCCTACTAAAAAGTCTCAAGCATCACAAGGTGGTGACCTTGAACGAAATGAAGCCTCAAGAAAGAATAAGAAAAAGAAAGAAAAGTCTAAATCAAAATATGAAATCCTGACAGTTCAAGAGCCACCAAGACTTGAAGATGCGGAGGAGTTTCCCAATCTGGCAGTTGCATCTGAAAGAAGAGACAGAGTAGAGTCACCGAAATTTCAATCTAAACAGCAGCCACAGAATAATTTTAAAAACAGTGGAAAGAAAAGCCAGATTCCAGTGCAGTTGGATTTGGGAGGCATGCTGGCAGCACTGGAGAAGAAGCAGCATGCCCAGCAGGCCAAGCAGTCCTCCAGACCAGTTGTGTTCTCAGTTGGAGCAGTGCCTGTCCTTTCCAAAGAAGCCAGCTCTGGGGAGTGGGGCCGCCGCTTCAGTCAGGTGAAGACTCCACACAACCCCTTGGACTCCAGCGCCCCGCTGATAAAGAAGGGGAAGCAGAGGGAGGTCCCCAAGGCCAAGAAGCCCACCTCACTGAAGAAGATTATTTTGAAAGAACGGGAAGAGAGAAAGCAGCAGAGACTCCGAGAAAATGCTGTGAGCCCGGCTATGGCCAGTGATGAGGCACAGGGTGCAGAGATCAGTGCTGAGGAGCAGGTCACCAACCAGGCTGGACCCACAGGTACCTCGGAATTGGCCGCCTCCACTCCTGCAGTTGAGGGCCAATCAGAAGACCCACCTGGTGCAGAGGTCCAGAAGGATGCAGACGCCTGCCAGCCTGCACCTGACCAAGCCGGCTTCCCCAAGATCCACAGCCGAAGATTCCGGGATTACTGCAGCCAGATGCTCAGTAAAGAAGTGGATGCCTGTGTCACAGACCTACTCAAGGAGCTGGTCCGCTTCCAAGACCGAATGTACCAAAAGGATCCAGTCAAGGCTAAGACCAAACGCCGGCTTGTGCTGGGGCTGAGGGAAGTTCTCAAACACCTAAAGCTCAAGAAGCTGAAATGCATCATCATTTCTCCCAACTGTGAGAAGATACAGTCAAAAGGTGGGCTGGATGACACTCTGCACACCATTATCGATTACGCCTGTGCGCAGAACATTCCCTTTGTGTTTGCTCTCAATCGCAAGGCTCTGGGGCGCAGTTTGAACAAAACCGTACCTGTCAGCATTGTGGGGATCTTCAGCTACGATGGAGCACAGGACCAGTTCCACAAGATGGTTGAGCTGACCATGGCAGCCCGGCAGGCGTACAAGACCATGCTCGAGAATGTGCGACAGGAGCTGGCAGGGGAGCCCACGCCTCAGACACCTCCCAGCCCACCCTCAGAGGGCCCCAGCAGCTCTGCCGAGAACAGCCCCTTGGCCCCCTCTGGAGAAGACCCCCACTACATTGAATTCTGGAAAACGCATCTGGAAGCATACAGTCGCTGTGCCCTGGAGCTGGAAGAATCCCTGGAGGCCTCAGCCTCTCAGATGACAAACTTGAATTTATAA

Related Sequences

XP_004851374.1 Protein

Secisbp2 PREDICTED: selenocysteine insertion sequence-binding protein 2 isoform X3 [Heterocephalus glaber]

Length: 848 aa      View alignments
>XP_004851374.1
MASEGPWGPEGTGNIKLSADVKPFVPKFSGLSMAWTESSEACVFPSCAATYYPFVQEPPVTDQKIYTEDMAFRASPFPPQYLSSEITLHPYAYSPYTLESTQNVCSVPASQYDYSQPSHYRGFQTAKPQNEHMCALPQETKALFKKKTCDEKKTYDEQKFKRTDGTVSSEIKSTRGSYHLSTHAENRLKPDGYHKRTDRKSRTTEKSPSTPTPAFEFSRLEFPELQGPENSMSGIQKQCRWGPLRSNSTISRVGKVGKPVGVVSGDEIVMKNNPDEYVTDNAASSSPSCTRELSWTPMGYIVRQTSSEPSPAPKNVTSVINLKTVVSSADPKNVSVSSSEVLSSDPSYNKEKHVHPTKKSQASQGGDLERNEASRKNKKKKEKSKSKYEILTVQEPPRLEDAEEFPNLAVASERRDRVESPKFQSKQQPQNNFKNSGKKSQIPVQLDLGGMLAALEKKQHAQQAKQSSRPVVFSVGAVPVLSKEASSGEWGRRFSQVKTPHNPLDSSAPLIKKGKQREVPKAKKPTSLKKIILKEREERKQQRLRENAVSPAMASDEAQGAEISAEEQVTNQAGPTGTSELAASTPAVEGQSEDPPGAEVQKDADACQPAPDQAGFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCIIISPNCEKIQSKGGLDDTLHTIIDYACAQNIPFVFALNRKALGRSLNKTVPVSIVGIFSYDGAQDQFHKMVELTMAARQAYKTMLENVRQELAGEPTPQTPPSPPSEGPSSSAENSPLAPSGEDPHYIEFWKTHLEAYSRCALELEESLEASASQMTNLNL