Details from NCBI annotation

Gene Symbol Clec5a
Gene Name C-type lectin domain family 5, member A, transcript variant X2
Entrez Gene ID 101710336

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLEC5A ENSCPOG00000011242 (Guinea pig)

Gene Details

C-type lectin domain family 5, member A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010108, Guinea pig)

Protein Percentage 68.78%
CDS Percentage 78.66%
Ka/Ks Ratio 0.7571 (Ka = 0.2446, Ks = 0.3231)

CLEC5A ENSG00000258227 (Human)

Gene Details

C-type lectin domain family 5, member A

External Links

Gene Match (Ensembl Protein ID: ENSP00000449999, Human)

Protein Percentage 70.81%
CDS Percentage 81.98%
Ka/Ks Ratio 0.52186 (Ka = 0.1776, Ks = 0.3402)

Clec5a ENSMUSG00000029915 (Mouse)

Gene Details

C-type lectin domain family 5, member a

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000121848, Mouse)

Protein Percentage 66.84%
CDS Percentage 78.42%
Ka/Ks Ratio 0.46052 (Ka = 0.2139, Ks = 0.4645)

Clec5a ENSRNOG00000026306 (Rat)

Gene Details

C-type lectin domain family 5, member A (Clec5a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034438, Rat)

Protein Percentage 70.0%
CDS Percentage 80.0%
Ka/Ks Ratio 0.45174 (Ka = 0.1941, Ks = 0.4297)

Genome Location

Sequence Coding sequence

Length: 576 bp    Location: 21874964..21866511   Strand: -
>XM_004851308.1
ATGAACTGGCACATGATAATCTCTGTGCTTATTGTAGTGGTGCTTAAAGCTATTGGAGTGACCTTATTTCTGCTGTATTTCCCACAGACTTTTTGGAAAAGTAATGATGGCATCATTCCTACTGGGAGCTATGGAACAGATAATGTGCATAATGTCTCACAAACTTTTGAGAGCAGTACTGAGAGCTTCATTCCCACAAGGAGGTATGGAACAGCCTGCCCCCCACACTGGCAGAACTTCAATCAAACAAGATGTTTCTTCTTGTCCACCACTGAATCAACCTGGAGCAATAGCAGGGATGACTGTGCAAAAAAAAGATCCACTTTGGCAATTGTCAACACGCCAGAGAAACTGAAGTATCTCCAAGACAAAGCTGATGCTGAGAAGTATTTTATTGGCTTAATGTACCAGCCTGCAGAGAATAAATGGCACTGGATCAACAACTCTGTGTTCATTGGCAATGTCACCAACAAGAATGAAAACTTCAACTGTGTCACCATAGGCCTGTCAACAACATTTGATGCTGCATCATGTGACGTCCCCTACCACTGGATCTGTGAGATGATTCCCAGATGA

Related Sequences

XP_004851365.1 Protein

Clec5a PREDICTED: C-type lectin domain family 5 member A isoform X2 [Heterocephalus glaber]

Length: 191 aa      View alignments
>XP_004851365.1
MNWHMIISVLIVVVLKAIGVTLFLLYFPQTFWKSNDGIIPTGSYGTDNVHNVSQTFESSTESFIPTRRYGTACPPHWQNFNQTRCFFLSTTESTWSNSRDDCAKKRSTLAIVNTPEKLKYLQDKADAEKYFIGLMYQPAENKWHWINNSVFIGNVTNKNENFNCVTIGLSTTFDAASCDVPYHWICEMIPR