Details from NCBI annotation

Gene Symbol Ssbp1
Gene Name single-stranded DNA binding protein 1, mitochondrial, transcript variant X2
Entrez Gene ID 101707844

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SSBP1 ENSCPOG00000003354 (Guinea pig)

Gene Details

single-stranded DNA binding protein 1, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003031, Guinea pig)

Protein Percentage 74.51%
CDS Percentage 79.3%
Ka/Ks Ratio 0.45208 (Ka = 0.2027, Ks = 0.4483)

SSBP1 ENSG00000106028 (Human)

Gene Details

single-stranded DNA binding protein 1, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSP00000419665, Human)

Protein Percentage 82.43%
CDS Percentage 85.81%
Ka/Ks Ratio 0.26056 (Ka = 0.1026, Ks = 0.3938)

Ssbp1 ENSMUSG00000029911 (Mouse)

Gene Details

single-stranded DNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031971, Mouse)

Protein Percentage 88.16%
CDS Percentage 86.4%
Ka/Ks Ratio 0.1735 (Ka = 0.0758, Ks = 0.4372)

Ssbp1 ENSRNOG00000012100 (Rat)

Gene Details

single-stranded DNA binding protein 1, mitochondrial (Ssbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016217, Rat)

Protein Percentage 87.16%
CDS Percentage 86.71%
Ka/Ks Ratio 0.17843 (Ka = 0.0787, Ks = 0.4411)

Genome Location

Sequence Coding sequence

Length: 555 bp    Location: 21746698..21754455   Strand: +
>XM_004851302.1
ATGCTTTTTCGAAGACCTTTATTACAGGTGATTCGTCAGTTTGTAAGACATGAGTCTGAAGTAGCCAGCAGTTTTGTTCTTGAAAGATCTCTAAATCGGGTACAGTTGCTTGGACGAGTGGGTCAGGACCCTGTCATGAGACAGGCGGAAGGAAAAAATCCAGTCACCATATTTTCTCTAGCAACAAATGAGATGTGGCGATCAGGGGACAGTGAAGCATACCAAATAGGTGATGTCAGTCAAAAGACGACATGGCACCGAATATCAGTGTTTCGGCCAGGCCTTAGAGATGTAGCATATCAATATGTGAAAAAGGGGTGTCGAGTTTTCGTGGAAGGGAAAATAGACTATGGTGAATACATGGATAAGAATAATGTGAGGCGACAAGCAACAACAATCATAGCTGGTAAGAAGCTTGTAATAATAGTTGTTTTTTTTCTTTCTTTGAAAGCTAGACTGTGTTGTAAATTACTAACTGGGGCTGTGAGTACCAGTGCTTGTGAAACTGTATGGAATTCAGAAGAATTTTATAACTTAGCTTTTTCTGTTTGCTAA

Related Sequences

XP_004851359.1 Protein

Ssbp1 PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X2 [Heterocephalus glaber]

Length: 184 aa      View alignments
>XP_004851359.1
MLFRRPLLQVIRQFVRHESEVASSFVLERSLNRVQLLGRVGQDPVMRQAEGKNPVTIFSLATNEMWRSGDSEAYQIGDVSQKTTWHRISVFRPGLRDVAYQYVKKGCRVFVEGKIDYGEYMDKNNVRRQATTIIAGKKLVIIVVFFLSLKARLCCKLLTGAVSTSACETVWNSEEFYNLAFSVC