Sequence details NCBI ID: XM_004851254.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zc3hav1
Gene Name zinc finger CCCH-type, antiviral 1, transcript variant X3
Entrez Gene ID 101720785

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC3HAV1 ENSCPOG00000007709 (Guinea pig)

Gene Details

zinc finger CCCH-type, antiviral 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006948, Guinea pig)

Protein Percentage 78.24%
CDS Percentage 85.91%
Ka/Ks Ratio 0.5704 (Ka = 0.1353, Ks = 0.2372)

ZC3HAV1 ENSG00000105939 (Human)

Gene Details

zinc finger CCCH-type, antiviral 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000242351, Human)

Protein Percentage 64.0%
CDS Percentage 76.22%
Ka/Ks Ratio 0.48803 (Ka = 0.2406, Ks = 0.493)

Zc3hav1 ENSMUSG00000029826 (Mouse)

Gene Details

zinc finger CCCH type, antiviral 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031850, Mouse)

Protein Percentage 58.3%
CDS Percentage 67.99%
Ka/Ks Ratio 0.30449 (Ka = 0.3131, Ks = 1.0284)

Zc3hav1 ENSRNOG00000013948 (Rat)

Gene Details

zinc finger CCCH type, antiviral 1 (Zc3hav1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018782, Rat)

Protein Percentage 58.88%
CDS Percentage 67.06%
Ka/Ks Ratio 0.32952 (Ka = 0.3326, Ks = 1.0093)

Genome Location

Sequence Coding sequence

Length: 2706 bp    Location: 19510391..19449601   Strand: -
Raw sequence   
>XM_004851254.1
ATGGCGGACCCGACGGTCTGCTGCTTCGTCACCAAGATCCTGTGCGCCCACGGCGGCCGCCTCAGCTTGGACGCGCTGCTCGAAAAGATCGAGCTCTCCGAGGCGCAGCTCCTGGAAGTGCTCAAGGAAGCCGGGCCCGACCGCTTCGTGGTGCTCGAGACCGGGGGGAGGGCCGGCGTCACCCGCTCGGTGGTGGCAACCACTCGAGCCCGCGTCTGCCGTCGCAAGTTCTGCGAGAGAAGTTCTTGCGACAATCTGCACCTCTGCAAGCTCAACCTGCTGGGCCGGTGCCACTATTCGCAGTCGGAGCGGAACTTATGCAAATATTCTCATGATGTTCTCTCAGAAAAAAATTTCCAAGTCCTGAAAAATCATGAACTCTCTGGACTAAACCAAGAGCAACTAGCGGTGCTGCTTCTCCAAAGTGACCCATTTTTTATGCCCGAGATATGCAAAAGTTACAAAGGAGAGGGTCGAAAACAGATCTGTAACCAGCAGCCACCATGTGAAAGACTCCACATCTGTGAACACTTCACTCGGGGGAACTGTAGTTACCCCAACTGCCTCAGATCCCACAACCTGATGGACAGAAAGGTGCTGGCCATCATGAGAGATCATGGACTGAGCCCAGCTGTGGTCCAGAACATCCAGGATATCTGCAACAATAAGCATATGCGGAGGAACCCTCCTGGGTCCAAAACTCCTGTGCACCGTAGAGCTAGGGCAGCTAGAGGGAGAAGCAAGAGTAGAGACCGAGTCTCTCAGGACATCAAGGAGTTCCTTCCTTCTGCCTCAGCTCACAAGTCAGGCACTCCCAGTCCGGATGGCACTGACAGTAGGGCCTCCCTGGAGGACGACCCTATGGATGACCTCATCCACAAGTTCGAGTTTCTGGAGACTCCAGATTGCACCCAGCCTTCCTCAGTCTCATCTAAGGCTGCTGGTCTTGGAAGACCAGGTCAAGTGGGAACAAGCCAGAGATTCTTAGAGAATGGCATTCCAGATGGCCTCTTTCATAGCAATCAAAGCCATCTTGCCTCTAATTCAACACCAGCCTCTAACCAGAAGGGCTCCCCATCCTGGCTGAATGCTCAAGGCACTGGGAAGGAGAGTGAGTTTTTTCCAAGTCAAGCTGTCCCTAGTTTTCCTCTTGATTCTACACAAACACTCAAAGCCTTAAACTCCAGAAAGGTGGTGGGAATGCTTTCATCAGACCACATGAATGTCAAGGATAAGAGTGGATCTCAAGACATCCAGCGAATCCCTATTTTCAGTAGGAATGCTGATGGAGTGGCCATGAACATGAATTTTGGAAAGACAGCCCAGAGAGAAATGGCACTATCAAGTTATCAGGACAGCAGAGCCACTCCCCGGGATCTCCACATTGGCAGCATTGCCAGTGATGATGCTAGAGTGGCATTTCTGAATGATTCCATATCTGATATTACAAATACCACATCTAGGATGGGTAATCTTGGCCCAGAGGGAATTTGTGTCGATTATCTGCATAACCGTTGTCAGCCTAACAGTGACTGCAGCAAAATCCACTTTCCCCTGCCCTACCGGTGGCAGGTGTTGATGTCGCACACCTGGAAGGACTTGGAGGACATGGAGAAGATTGAGAAGGCCTATTGTAACCCCAGGAGCCATGTCCTTTCGATAGAAAATCACATACTTGATTTCCAGAAAATGACTTATGCTCTTAAGCCCATTCGACGCATCTCCTCCCCTTCATCTGGCATGAACCAGGCCAGTACTGTCTTCACCACCAAATGGATTTGGTATTGGGAGAATGAATCTGGTGAATGGATCCAGTATGGAAAAGGGAGCAACAACCAGCCAGGTTCCAACATTGACTCTTCCTACCTGGAGTCTTTCTTTCAGAAGTGTCCCAGGGGAGTTGTGCCATTTCAGGCAGGTACTAGGAACTACGAGCTGAGTTTCCAAGGGATGATTCAGACAAACATAGCTTCCAAGACTCAGAAGAATGTTGTCCGAAGGCCAGAATTTGTTTCTGCGCGGGATGTGGAGCAGATGAGAAGGGGGCCAGATCCTCAGCGGGTGCAGTTCTCTGCTTCCAGTCCTCAGCCTGTGCACACCCCACCAGAGGCTGTTGGCTCAACATTTGTTCCTCAGTGGGATGTCCTCTCTCCCACTTCAAGTGGATACAAGTTGCTAGATCTCGATAACCAGTCTTTGGAATATGCCACCATAAGGGATAATTTCAAAGAGTCCATGAAAAATTTCAAGATCGAAAAGATAAAGAAGATCCATAATCCAGAGCTCTTGAATTCTTTTGAAAGGAGGCGACTGAACATGACAGAGAAAAGGGAAAGACTCCTATTTTATGCAACAAGCCGCACCCACGTGGATTCTATCTGTGCAAATAATTTTATGTGGAACTTACATGGAACTCACGAAAACAAATATGGAAAAGGAAATCACTTCTCAAAGGATGCCATCTATTCCCACAAAAATTGCCTATATGATGCCAGAAACATCGTTATGTTCGTAGCCCGAGTCTTGGCAGGAGATTTTATTGAGGGAAATATGACGTTCGTGAGCCCTCCTCCGCCGTACAACAGCTGTGTGGATACAATGCTCAATCCCTCTGTTTTTGTCATCTTCCGCAATGATCAGGTTTACCCAGCATACTTGATTGAATATAGTGAGCCAGACAGAGAGAAGGCCTGTGTGATTAGCTAG

Related Sequences

XP_004851311.1 Protein

Zc3hav1 PREDICTED: zinc finger CCCH-type antiviral protein 1 isoform X3 [Heterocephalus glaber]

Length: 901 aa      View alignments
>XP_004851311.1
MADPTVCCFVTKILCAHGGRLSLDALLEKIELSEAQLLEVLKEAGPDRFVVLETGGRAGVTRSVVATTRARVCRRKFCERSSCDNLHLCKLNLLGRCHYSQSERNLCKYSHDVLSEKNFQVLKNHELSGLNQEQLAVLLLQSDPFFMPEICKSYKGEGRKQICNQQPPCERLHICEHFTRGNCSYPNCLRSHNLMDRKVLAIMRDHGLSPAVVQNIQDICNNKHMRRNPPGSKTPVHRRARAARGRSKSRDRVSQDIKEFLPSASAHKSGTPSPDGTDSRASLEDDPMDDLIHKFEFLETPDCTQPSSVSSKAAGLGRPGQVGTSQRFLENGIPDGLFHSNQSHLASNSTPASNQKGSPSWLNAQGTGKESEFFPSQAVPSFPLDSTQTLKALNSRKVVGMLSSDHMNVKDKSGSQDIQRIPIFSRNADGVAMNMNFGKTAQREMALSSYQDSRATPRDLHIGSIASDDARVAFLNDSISDITNTTSRMGNLGPEGICVDYLHNRCQPNSDCSKIHFPLPYRWQVLMSHTWKDLEDMEKIEKAYCNPRSHVLSIENHILDFQKMTYALKPIRRISSPSSGMNQASTVFTTKWIWYWENESGEWIQYGKGSNNQPGSNIDSSYLESFFQKCPRGVVPFQAGTRNYELSFQGMIQTNIASKTQKNVVRRPEFVSARDVEQMRRGPDPQRVQFSASSPQPVHTPPEAVGSTFVPQWDVLSPTSSGYKLLDLDNQSLEYATIRDNFKESMKNFKIEKIKKIHNPELLNSFERRRLNMTEKRERLLFYATSRTHVDSICANNFMWNLHGTHENKYGKGNHFSKDAIYSHKNCLYDARNIVMFVARVLAGDFIEGNMTFVSPPPPYNSCVDTMLNPSVFVIFRNDQVYPAYLIEYSEPDREKACVIS