Sequence details NCBI ID: XM_004851244.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trim24
Gene Name tripartite motif containing 24, transcript variant X4
Entrez Gene ID 101717311

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM24 ENSCPOG00000011312 (Guinea pig)

Gene Details

tripartite motif containing 24

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010171, Guinea pig)

Protein Percentage 97.21%
CDS Percentage 93.52%
Ka/Ks Ratio 0.05093 (Ka = 0.013, Ks = 0.2545)

TRIM24 ENSG00000122779 (Human)

Gene Details

tripartite motif containing 24

External Links

Gene Match (Ensembl Protein ID: ENSP00000340507, Human)

Protein Percentage 95.45%
CDS Percentage 91.96%
Ka/Ks Ratio 0.07105 (Ka = 0.0217, Ks = 0.3055)

Trim24 ENSMUSG00000029833 (Mouse)

Gene Details

tripartite motif-containing 24

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031859, Mouse)

Protein Percentage 93.97%
CDS Percentage 88.56%
Ka/Ks Ratio 0.06588 (Ka = 0.0311, Ks = 0.4725)

Trim24 ENSRNOG00000013251 (Rat)

Gene Details

transcription intermediary factor 1-alpha

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050587, Rat)

Protein Percentage 88.75%
CDS Percentage 83.3%
Ka/Ks Ratio 0.09836 (Ka = 0.0705, Ks = 0.7169)

Genome Location

Sequence Coding sequence

Length: 3036 bp    Location: 18967213..19078578   Strand: +
Raw sequence   
>XM_004851244.1
ATGGAGGTGGCTGTGGAGAAAGCGGCGGCTCCGGCGGCGGCCGCCGGGGGGCCCTCGGCGGCGCCGAGCGGGGAGAACGAGGCCGAGAGCCGGCAGGGCCCCGACTCGGAGCGCGGCGGCGAGGCGTCCCGGCTCAACCTGTTGGACACTTGCGCCGTGTGCCACCAGAACATCCAGAGCCGCGCACCCAAGCTGCTGCCCTGTCTGCACTCCTTCTGCCAGCGCTGCCTGCCCGCGCCGCACCGCTACCTCATGCTGCCGGCGCCCATGCTCGGCGCGGCCGACTCCGCGCCGCCGCTGTTGGCTCCCGGCTCGCCGGTCGGTGGCTCCTCGCCCTTCGCCGCGCAAGTTGGAGTCATTCGATGCCCGATTTGCAGCCAAGAATGTGCTGAGAGACACATCATAGATAATTTTTTTGTGAAGGACACTACTGAGGTTCCCAGCAGTACAGTGGAAAAGTCTAATCAGGTATGCACAAGCTGTGAAGACAATGCAGAAGCTAATGGGTTTTGTGTAGAGTGTGTTGAATGGCTTTGTAAGACATGCATTAGAGCTCATCAGAGGGTGAAGTTTACAAAAGACCACACTGTCAGACAAAAGGAGGAAGTATCTCCAGAGGCAGTTGGTGTGACTAGTCAGCGACCAGTGTTTTGTCCTTTTCATAAAAAGGAGCAGTTGAAGCTTTATTGTGAGACGTGTGACAAATTGACATGTCGGGACTGTCAACTGCTAGAACACAAAGAGCATAGGTACCAGTTTATAGAAGAGGCTTTTCAGAATCAGAAAGTGATCATAGATACACTAATCACCAAACTGATGGAAAAAACGAAATATATAAAATATACAGGAAATCAGATCCAAAACAGAATAATTGAAGTAAACCAAAATCAAAAGCAAGTGGAACAAGATATTAAAGTTGCTATCTTTACGTTGATGGTAGAAATAAATAAAAAAGGAAAAGCTCTGCTGCATCAGCTAGAGAGCCTTGCAAAAGATCATCGCATGAAACTTATGCAACAGCAGCAGGAAGTGGCTGGGCTTTCTAAACAGCTGGAACATGTCATGCATTTTTCTAAATGGGCAGTTTCCAGTGGCAGCAGTACAGCATTACTTTATAGCAAACGACTGATTACATACCGGTTACGGCACCTCCTTCGTGCAAGGTGTGATGCTTCCCCAGTGACCAATAACATCATCCAATTTCACTGTGATCCTAGTTTCTGGGCCCAAAATATTATCAACTTAGGTTCTTTAGTAATTGAGGATAAAGAGAGCCAGCCGCAAATGCCTAAGCAGAATCCTGTCGTGGAACAGAATTCACAACCACCAGGTGGTTTATCTTCAAACCAGTTATCCAAGTTTCCAACCCAGATCAGCCTAGCTCAATTACGACTCCAGCATATGCAGCAACAGCAACCCCCTCCGCGTTTGATAAACTTTCAAAATCACAGCCCTAAACCCAATGGACCAGTTCTTCCTCCTCATCCTCAACAACTGAGATATCCACCAAACCAGAATATGCCACGGCAAGCAATAAAGCCCAACCCACTACAGATGGCTTTCTTGGCTCAACAAGCCATCAAACAGTGGCAGATCAGCAGCGGACAGGCTGCCGCCACAACTGCCAGCAGCTCATCCTCTACTCCTTCCAGCCCCACCATCACGAGTGCAGCAGGATATGATGGAAAGGCTTTTGGTTCACCTATGATTGATCTGAGCGCACCAGTGGGCGGTTCTTACAATCTTCCTTCTCTTCCTGATATTGATTGTTCAAGTACTATTATGCTGGACAACATTGGGAGGAAAGATACCAGCACAGATCATGGCCAGCCCAGACCGCCCTCCAATAGAACCGTGCAGTCACCAAACTCATCAGTGCCCTCTCCAGGGCTCGCAGGACCTGTTACTATGACTAGTGTCCATCCCCCAATACGTTCACCTAGTGCCTCCAGCGTTGGGAGCCGGGGAAGCTCTGGTTCTTCCAGCAAACCAACAGGAGCTGATTCTACACACAAAGTCCCAGTAGTCATGTTGGAGCCAATCCGAATAAAACAAGAAAACAGTGGACCACCTGAAAATTATGATTTTCCCGTTGTTATAGTGAAACAAGAATCAGATGAAGAATCTAGGCCTCAAAATACCAACTATCCAAGAAGCATACTTACTTCCCTGCTCTTAAATAGCAGTCAGAGCTCTGCTTCTGAGGAGACTGTTGTAAGATCGGATGCCCCTGATAGCACTGGGGATCAGCCTGGACTTCACCAGGAGAATCCCTCCAATGGGAAGTCGGAGTGGCCCAATGCCTCCCAGAAGTCACCCGTTCATGTTGGGGAGACAAGGAAAGAGGATGACCCCAACGAGGACTGGTGTGCAGTTTGTCAAAATGGAGGAGAACTGCTGTGCTGTGAGAAGTGTCCAAAAGTTTTCCACCTCTCTTGTCATGTGCCCACGTTGACAAATTTTCCAAGTGGAGAGTGGATTTGTACTTTCTGCCGAGATTTATCTAAACCAGAAGTTGAGTATGATTGTGATGCTCCCACTCACAATTTGGAAAAAAAGAAAACTGAAGGTCTTGTTAAATTAACACCAATAGATAAAAGGAAGTGTGAACGCCTACTTTTATTTCTTTACTGCCATGAAATGAGCCTGGCTTTTCAAGACCCTGTTCCTCTAATTGTGCCTGATTATTACAAAATAATTAAAAATCCAATGGACTTATCAACCATAAAGAAAAGACTGCAAGAAGATTCTTCCTTATACACAAAGCCTGAAGATTTTGTGGCTGATTTCAGATTGATCTTTCAGAACTGTGCTGAATTTAATGAGCCTGATTCAGAAGTAGCCAATGCTGGTATAAAACTTGAAAGCTATTTTGAAGAACTTCTAAAGAACCTTTATCCAGAAAAAAGATTTCCTAAAGTAGAATTCAGGAATGAATCAGAAGATAATAAATTTAGTGATGATTCAGATGATGACTTTGTACAGCCCCGGAAGAAGCGCCTCAAAAGCATCGAGGAGCGCCAGTTGCTTAAATAA

Related Sequences

XP_004851301.1 Protein

Trim24 PREDICTED: transcription intermediary factor 1-alpha isoform X4 [Heterocephalus glaber]

Length: 1011 aa      View alignments
>XP_004851301.1
MEVAVEKAAAPAAAAGGPSAAPSGENEAESRQGPDSERGGEASRLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPHRYLMLPAPMLGAADSAPPLLAPGSPVGGSSPFAAQVGVIRCPICSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKYTGNQIQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNIIQFHCDPSFWAQNIINLGSLVIEDKESQPQMPKQNPVVEQNSQPPGGLSSNQLSKFPTQISLAQLRLQHMQQQQPPPRLINFQNHSPKPNGPVLPPHPQQLRYPPNQNMPRQAIKPNPLQMAFLAQQAIKQWQISSGQAAATTASSSSSTPSSPTITSAAGYDGKAFGSPMIDLSAPVGGSYNLPSLPDIDCSSTIMLDNIGRKDTSTDHGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPTGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLLNSSQSSASEETVVRSDAPDSTGDQPGLHQENPSNGKSEWPNASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPTHNLEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLIVPDYYKIIKNPMDLSTIKKRLQEDSSLYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRNESEDNKFSDDSDDDFVQPRKKRLKSIEERQLLK