Details from NCBI annotation

Gene Symbol Carf
Gene Name calcium responsive transcription factor, transcript variant X1
Entrez Gene ID 101698991

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CARF ENSCPOG00000008827 (Guinea pig)

Gene Details

calcium responsive transcription factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007925, Guinea pig)

Protein Percentage 88.63%
CDS Percentage 91.03%
Ka/Ks Ratio 0.29052 (Ka = 0.061, Ks = 0.21)

CARF ENSG00000138380 (Human)

Gene Details

calcium responsive transcription factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000384006, Human)

Protein Percentage 86.11%
CDS Percentage 89.35%
Ka/Ks Ratio 0.27947 (Ka = 0.0743, Ks = 0.266)

Carf ENSMUSG00000026017 (Mouse)

Gene Details

calcium response factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027171, Mouse)

Protein Percentage 74.85%
CDS Percentage 81.83%
Ka/Ks Ratio 0.31176 (Ka = 0.146, Ks = 0.4683)

Carf ENSRNOG00000017491 (Rat)

Gene Details

calcium responsive transcription factor (Carf), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023536, Rat)

Protein Percentage 76.79%
CDS Percentage 79.64%
Ka/Ks Ratio 0.23947 (Ka = 0.1473, Ks = 0.6153)

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location: 13504472..13430649   Strand: -
>XM_004851194.1
ATGGAAGAGTCTAAGGATTCATTAGAAGTCAACTGTAATGATGGTGAATCGTCCAGAACAGATGCACAGGAGTTTGAGCATCTAGCCTGTATGGACACCAGGGATCCTTCCTTTGGACAAAATGAATCTCCTGCAGTTTTGCCAATCACTACTCCTGAACCAGATAATCCACTCACATCACAGGATATCCCAGGACCCCTAACTCAGACCCCAACTCTTTCTGCAGAGCAATTTCATCTAGTGGACCAAAATGGGCAGCCTGTTCAATATGAACTTCAATCATTGGGGGATTCACAAATGATGATCGTTGCTAGCCCATCAGAGAATGGACAGGTGCTTCATGTAATTCCATCTACCCAGACAGGAATGGGACAAGTGATTATACCTCAGGGGCAGCTTGTGGATGCAAACAGTCCTCAGGATATTTCTGAAGAGAAATCCAGTGACAGAAATGTACTAAGAGTGGATGCTGTGGCAGACAGCACCAGTAATTACATCCTTCACCCACGCACGTCCCTCACATTGCCCAGAAAGTCCGTGACCAGAATGCTTGATGAACCTTTGCTGGCTCCTCTCCAGCCTCTTTCTTCTAACACACCTATATGGGCCTGCCGTCTTAGGAGCTGTGAGAAAATTGGAGATTCATACCGTGGCTACTGTGTAAGTGAGACTGAATTAGAAAGTGTCTTAACATTTCACAAGCAGCAAACACAGAGTGTTTGGGGGACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCTACACGCTTGATGTGGAAATCCCAGTATGTCCCATATGATGGAATCCCCTTTGTCAATGCAGGGAGTAGAGCTGTGGTAATGGAGTGTCAATATGGGCCAAGGAGAAAAGGGTTCCAGTTAAAAAAAATCAGTGAACAGGAAAGCAGGTCATGTCAGCTCTACAAAGCCACCTGTCCAGCCAGGATTTACATTAAAAAGGTGCAGAAGTTTCCTGAATATAGAGTACCCACAGACCCCAAAATTGATAAGAAAATAATCAGAATGGAACAGGAAAAAGCCTTTAACATGTTAAAGAAGAACTTGGTAGATGCTGGTGGTGTTCTTAGGTGGTATGTACAGTTACCTACTCAGCAAGCTCATCAGTATCATGAATTAGAGACGACTTGCCTCCCTTTGTCACCTTCCCTTTTTCCTATTTCTTCTCTTGAAGAAGAGGAAACTACAGTCAGAGATGAGAATTGTACATTACCCTCACGTTTACACCCTCAAGTAGCACATAAGATTCAAGAGTTAGTATCACAGGGCATAGAACAAGTATATGCAGTGAGGAAACAGCTAAGAAAATTTGTGGAAAGAGAACTGTTCAAACCTGATGAAATACCTGAAAGACATAATTTGTCTTATTTTCCGACTGTAAATGATATAAAAAATCACATCCATGAGGTACAGAAATCCTTGCAAAATGGAGATACGGTGTATAACTCAGAGATTATTCCAGCCACGCTTCAGTGGACTACAGATAGTGGAAATATTCTGAGAGAGACTGTGACGGTTACATTTGCAGAAGGAAATTCACCAGGAGAATCAATTCCCACCAAAGTGGAAACAAATCAGACAGGGACTTCTTTGTCTCCAGAGCCAACTCACTTGCTTTCCTCACTTTCTTCATTTCAGCCCAAAATATTTACACAACTACAGGGTTTGCAGTTACAATCAAGATTCACCTCTCCAGATGGGTCACCTCTGTTATCAGTAAATAACCACCCCTCCTCTAGTCCTTCAAGACTTCTGGATTCAATAGAAAGTACTTCAATGGACAATAATTCTCTACTGCGTGGTCAAAGTCCTAGCCTTCCAACAGATACATGCCTAACCCAAAACAATAGTACTGTGTCTACTGGGGGTAACTTCCAAGGACCAGATCAAACTCTAGTGGCAGTGGACCAGCTGATGGAAGTTGGAGATGTCGAGGATACAGGGAATCTGGAAGGAAGTGTCCATGAGATATTGTTGGGAGATGTGCAGACCGTTCCAATACAGATTATAGACAACCACCCAGCTCTTATTGAAGAAAATACAGAATGTACTATTTCTGTCAATCAAGTTAAACAAGAACCCAAAGAACCAACATTGTCTATGGTACCAAAAATGAATTTGGATTGTGAGAAATTATCTGCTACATAA

Related Sequences

XP_004851251.1 Protein

Carf PREDICTED: amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein isoform X1 [Heterocephalus glaber]

Length: 720 aa      View alignments
>XP_004851251.1
MEESKDSLEVNCNDGESSRTDAQEFEHLACMDTRDPSFGQNESPAVLPITTPEPDNPLTSQDIPGPLTQTPTLSAEQFHLVDQNGQPVQYELQSLGDSQMMIVASPSENGQVLHVIPSTQTGMGQVIIPQGQLVDANSPQDISEEKSSDRNVLRVDAVADSTSNYILHPRTSLTLPRKSVTRMLDEPLLAPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKISEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETTCLPLSPSLFPISSLEEEETTVRDENCTLPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEIPERHNLSYFPTVNDIKNHIHEVQKSLQNGDTVYNSEIIPATLQWTTDSGNILRETVTVTFAEGNSPGESIPTKVETNQTGTSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQSRFTSPDGSPLLSVNNHPSSSPSRLLDSIESTSMDNNSLLRGQSPSLPTDTCLTQNNSTVSTGGNFQGPDQTLVAVDQLMEVGDVEDTGNLEGSVHEILLGDVQTVPIQIIDNHPALIEENTECTISVNQVKQEPKEPTLSMVPKMNLDCEKLSAT