Sequence details NCBI ID: XM_004851161.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ino80d
Gene Name INO80 complex subunit D, transcript variant X3
Entrez Gene ID 101717660

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

INO80D ENSCPOG00000010964 (Guinea pig)

Gene Details

INO80 complex subunit D

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009853, Guinea pig)

Protein Percentage 84.9%
CDS Percentage 83.94%
Ka/Ks Ratio 0.12233 (Ka = 0.0815, Ks = 0.6659)

INO80D ENSG00000114933 (Human)

Gene Details

INO80 complex subunit D

External Links

Gene Match (Ensembl Protein ID: ENSP00000384198, Human)

Protein Percentage 94.13%
CDS Percentage 91.14%
Ka/Ks Ratio 0.09919 (Ka = 0.0299, Ks = 0.3013)

Ino80d ENSMUSG00000040865 (Mouse)

Gene Details

INO80 complex subunit D

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130864, Mouse)

Protein Percentage 91.64%
CDS Percentage 88.66%
Ka/Ks Ratio 0.11068 (Ka = 0.0444, Ks = 0.4015)

Ino80d ENSRNOG00000024272 (Rat)

Gene Details

INO80 complex subunit D (Ino80d), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037428, Rat)

Protein Percentage 92.53%
CDS Percentage 89.02%
Ka/Ks Ratio 0.09546 (Ka = 0.0384, Ks = 0.4026)

Genome Location

Sequence Coding sequence

Length: 3090 bp    Location: 10057245..10118602   Strand: +
Raw sequence   
>XM_004851161.1
ATGTATGAAGGGAAACATATACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGCGGCGACTCAACGGCTACGCATTCTGCATCAGACACGTTTTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAGCGCTGCACCAACCCCATCCCCAAATCGGAGGATCGCAGCCACTTGCAGGTACTTGGCTTTATCCCGAAAAAAGAGAGGAAGAAAAAGAATGATCCTATAGATGAGGTAAAGGTCAGGCACCAGATGGATACCATGGCCTTCAGCCTGACAGTGCCCACGCTGGCCCTGAAGATGCCCAATGGACTGGATGGCATGTCCCTCTCTCCACCTGGGGCCAGGGTCCCTCTCCACTACCTGGACACTGAGTTTGAAGACCCGTTTGCGTTCAATGAGGAAGACGATGACCTAAAGAAAGGGGCAACTGTGAGAAGGAAGTTGCAGAGCAAGTTGGCCCAGAACCGGCAGCGCCAGAGAGAGACCGAGATTCTAAAAGTTCGACAAGAGCACTTTAGTCCCCCTCCTGCATCTTCCCAGCAGCAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTATCCACATCTTTAAAACCTCCAGCGCCACCACAGGGCTCCATCTGCAAGTCACCTCAACCTCAGAACACCAGCGCACCAGTGCAGGGAGTGGCCCCCACCACACTCACCATAGCACAAGCTCGGCAGGCATCGCACAAGAGGCCTCCGCCCCTCCTTCCAGCCAGCAGGGCTACTGCTGCGGACCTGCCCCGGACTGACCGGGTCCTCATGAAAGCCACCGCCTTCTCTCCACACTTCTCCTGCATAAGTCGGCTGCAGAGACTGGTGAAACTATACACCCAGAAGCATCAGCTGGACACAGATCTGTTTCCCCATTTAGGGTTGGACTGGTCTGAAGAGAGTGGAGAGGAGCTGGAAGACTCTGAGCAGGCCTCCCCATACCAGGTTGCATGGTCCGTCCGGGAAACGCTCAGATATGAAAGACACACGTCTGACGACGACGACGACGACGACGACGTGGAGAGCAGGAGCTCCAGGGTGACCCAACTTTGCACTTACTTTCAGCAGAAGTACAAGCACCTCTGCCGCCTGGCGCGGGAGGAGTCACGGCAGAAAAGATGCAGGCTGGCGCTGAGGAAGGCGCTGCTGCAGGCGGCCAGCCGGGAGCCGGAGAGCGCTGGCCAGCTGCTGCAGGAGCTGCGGAGAGAGGCGTGCGGCGGGGCCAGCATAAGCCAGACCAAGTTGAAGGAGTTAGAACCCGCAGCTTGCAGCGGAGCCACGAAGGGTGAGCAGTGTACAAACAGAGCCCTTCCGTTCACCAGACACTGTTTCCAGCACATCCTCTCGAACCGCTCCCAGCAGCTCTTCTCCAGCTGCACCGCCAGGTTTGCAGATGGGCAGCAGTGCTCGGTGCCTGTGTTTGACATCACACACCAGACACCGCTGTGTGAAGAACATGCCAAAAAAATGGATAATTTCTTGAGAGGAGATAACTCTCGTAAAGTTCAGCACCAGCAGCAGAGGAAACCCAGGAAAAAAACCAAGCCTCCTGCACTTACCAAAAAACATAAGAAAAAGAGACGGCGTGGACCTCGTCGACCCCAGAAGCCCATTCCCCCTGCGGTCCCCCAGGGGAACCTCAGCATGCCCACCAGCATCTCACTGCCAGTGGAGGCCCCTCACATCCGGAGCCCATCCACCCCAGAGCTGAGTGCTGATGAGTTGCCAGATGATATTGCCAATGAGATCAGCGACATTCCACACGACTTGGAACTGAACCAGGAGGACTTCTCTGATGTCCTGCCCAGGCTACCTGATGACCTACAGGATTTTGATTTTTTTGAAGGGAAGAATGGAGACCTCCTCCCGATGAGCGAAGAGGCCGAGGAGCTTGAGCGGGCCTTGCAGGCCGTCACTTCTCTTGAGTGCCTGAGTACCATTGGGGTCCTTTCCCAGTCAGATGGTGTGTCCGTCCAGGAGCTGTCAGATAGAGGAATAGGGGTGTTTTCCACGGGCACTGGAGCTTCAGGAATCCATTCTTTGAGCCGAGAAGTGAACACGGACCTAGGGGAGCTATTGAACGGGCGTATAGTACCTGATAATTTTTCTAGTTTAGAGCTGGATGAAAACCTGCTCCGTTCTGCTACCTTGTCTAACCCACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCAGCCAACGTTGGCCTTACTTCTGCCACTCTGATCAGCCAGAGTGCACTCGGGGAGCGAGCCTTCCCAGGACAGTTTCATGGAGTCCACGATGGCAGCCATGCCTCTCAGAGGCCACATCCTGCCCAGCTGCTGAGCAAGGCAGACGACCTGATCACCTCACGACAGCAATACAGCAGTGACCATTCACACTCCTCGCCCCACGGAAGCCATTATGATAGTGAGCACGTGCCGTCTCCCTACAGTGACCATATCACCTCGCCCCACACAACATCTTACTCTGGTGATAATATGGCAGCTACCTTTTCAGCAGAGATGCCCATCATGGCACAGCACTTGCTCCCCACACAACTTGAGGTGCCACTTGGAGGAGTGGTAAACCCCAGAACTCACTGGGGGAACCTCCCCGTCAACCTCGGTGAGCCCTCTCCATTCAGCAACCTTCTCGGCGCAGACGGACATCTTCTCTCCACTTCCCTCTCCACACCTCCCACCACCTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGCAACCCCCAGCAGCTCCAGCGTGCTCCCGGGGTTGCCCCAGACCAGCTTCAGTGGCATGGGGCCTTCTGCGGAACTCATGGCCTCCACCTCTCCCAAGCAGCAGCTCCCTCAGTTCAGCGCAGCCTTCGGCCACCAGCTGAGTGCTCACAGTGGCATCCCCAAGGACCTGCAGCCAAGCCACAGCTCCATAGCCCCCCCTACAGGCTTCACAGTGACAGGTGCCACAGCTACAAGTACCAATAATGCATCCTCTCCCTTCCCTTCTCCTAACTGA

Related Sequences

XP_004851218.1 Protein

Ino80d PREDICTED: INO80 complex subunit D isoform X3 [Heterocephalus glaber]

Length: 1029 aa      View alignments
>XP_004851218.1
MYEGKHIHFSEVDNKPLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQRCTNPIPKSEDRSHLQVLGFIPKKERKKKNDPIDEVKVRHQMDTMAFSLTVPTLALKMPNGLDGMSLSPPGARVPLHYLDTEFEDPFAFNEEDDDLKKGATVRRKLQSKLAQNRQRQRETEILKVRQEHFSPPPASSQQQQQPPQQHSHLSPLSTSLKPPAPPQGSICKSPQPQNTSAPVQGVAPTTLTIAQARQASHKRPPPLLPASRATAADLPRTDRVLMKATAFSPHFSCISRLQRLVKLYTQKHQLDTDLFPHLGLDWSEESGEELEDSEQASPYQVAWSVRETLRYERHTSDDDDDDDDVESRSSRVTQLCTYFQQKYKHLCRLAREESRQKRCRLALRKALLQAASREPESAGQLLQELRREACGGASISQTKLKELEPAACSGATKGEQCTNRALPFTRHCFQHILSNRSQQLFSSCTARFADGQQCSVPVFDITHQTPLCEEHAKKMDNFLRGDNSRKVQHQQQRKPRKKTKPPALTKKHKKKRRRGPRRPQKPIPPAVPQGNLSMPTSISLPVEAPHIRSPSTPELSADELPDDIANEISDIPHDLELNQEDFSDVLPRLPDDLQDFDFFEGKNGDLLPMSEEAEELERALQAVTSLECLSTIGVLSQSDGVSVQELSDRGIGVFSTGTGASGIHSLSREVNTDLGELLNGRIVPDNFSSLELDENLLRSATLSNPPTPLAGQIQGQFSAPANVGLTSATLISQSALGERAFPGQFHGVHDGSHASQRPHPAQLLSKADDLITSRQQYSSDHSHSSPHGSHYDSEHVPSPYSDHITSPHTTSYSGDNMAATFSAEMPIMAQHLLPTQLEVPLGGVVNPRTHWGNLPVNLGEPSPFSNLLGADGHLLSTSLSTPPTTSNSETTQPAFATATPSSSSVLPGLPQTSFSGMGPSAELMASTSPKQQLPQFSAAFGHQLSAHSGIPKDLQPSHSSIAPPTGFTVTGATATSTNNASSPFPSPN