Sequence details NCBI ID: XM_004851102.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bard1
Gene Name BRCA1 associated RING domain 1, transcript variant X1
Entrez Gene ID 101722439

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BARD1 ENSCPOG00000011499 (Guinea pig)

Gene Details

BRCA1 associated RING domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010340, Guinea pig)

Protein Percentage 84.03%
CDS Percentage 87.22%
Ka/Ks Ratio 0.28567 (Ka = 0.0896, Ks = 0.3136)

BARD1 ENSG00000138376 (Human)

Gene Details

BRCA1 associated RING domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000260947, Human)

Protein Percentage 79.74%
CDS Percentage 85.11%
Ka/Ks Ratio 0.31115 (Ka = 0.1135, Ks = 0.3647)

Bard1 ENSMUSG00000026196 (Mouse)

Gene Details

BRCA1 associated RING domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027393, Mouse)

Protein Percentage 72.48%
CDS Percentage 79.9%
Ka/Ks Ratio 0.33307 (Ka = 0.1673, Ks = 0.5023)

Bard1 ENSRNOG00000014960 (Rat)

Gene Details

BRCA1 associated RING domain 1 (Bard1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020414, Rat)

Protein Percentage 71.28%
CDS Percentage 78.72%
Ka/Ks Ratio 0.34793 (Ka = 0.1822, Ks = 0.5236)

Genome Location

Sequence Coding sequence

Length: 2325 bp    Location: 1354551..1418260   Strand: +
Raw sequence   
>XM_004851102.1
ATGCCAGGCAGCCGGCAGCCGAGGGTGCACTCCGGGAACCTGCCGCGCCCCGCGCCCACCATGGAGCAGCCAGCTGGCGGCGGAGCCTGGGCCCACAGCCGCGCCGCGCTTGTCCGCCTGGAGCAGCTGCTGCGCTGCTCGCGCTGTACTAATATTCTGAGGGAGCCTGTGTGCTTAGGAGGGTGTGAGCACATCTTTTGTAGTGATTGTGTAAGTGACTGCATTGGAACCAGATGTCCAGTATGTTCCACCCCAGCCTGGATCCTAGACGTCAGGATAAACAGACAATTGGACAGCATGATTCAGCTTTATAGTAAGCTTCGAAATTTGCTACACAACGATAAGTTTTCAGATTTGAAAGAAGATGCATCTAGGACAAATTTATTTAATGATGCAGAAAACAAGAAGAATTCAGTAAAAATGTGGTTTAGTCCTCGAAGTAAGAGGGTCAGGTACGTTGTGAGGAAAGTTTCAGTGCAAACCAAGCCTCAGAAGACAAAAGATGAAAATGCTCAGCAAGCCTCAATGTATGAATTTGTTTCTGCAACACCTCCTATGGTTGTTTCTAAGAGAGCTAAAAAAGCTTCTACAACATCTGCAAAAAAGCAACAAAAGAAAACTTTAGCCGAAATCAACCAAGAATGGAATTTAAACAGAGAGAAGGAAGATGATGAACTTGATCTCAAAGAAGAATTTAAGGAAAAGCAGGTATCCTTCTGTAGCCAGCCAGCCATTATTGGTAGTCCAAAAGTAAATGGCGAAATAGACTTACTGGCAAGCGGCTCTGTAACAGAATTGGAAAGTTGTGGAAGCTTAACTGAAGTCTTCCTACCATTGGCTGAGCATATAGAGTCTCCAGACAATGACAACATGATTGAAGTGTCTCCTGAGAAAGCCTGTGAGAATGATCTTACATCCAAGACGTCTTTGCCATTAGGTCATAATGGAAAACGTGGACCTTGCAACAGACTTTCTAGTCCTGTTTCTAAGAAATGCAGAAGCAGCATTCCAAGCACCAGTGGAGATGTTGTTAGGCAAACCGTGCTCTCAGAAAACATAGCATTGCTTGACTGTTCATCACCAGCTTCAGGCACACTTAAAGTTGATGACACATTAAGGAGGGAAAATGATAATGTATCAGATGATTCCATTAGTCTTTCACCATGTACACTACCTTCTACACTGAATAGTTCCAGTTACAGACGACTGATGTCAAGCCCCTCTGCAATGAAGCTGTACCCCCATGGCTTTATGGCCAGGAAAAGAAATCATAGAGGAGAAACTTTACTTCATATTGCTTCTATAAAGGGCGATGTATCATCTGTAGAGTACCTCTTGCAAAATGGAACTGACCCAAATGTTAAGGACAATGCTGGATGGACACCATTGCATGAAGCCTGCAATCATGGGCACCTGAAGGTAGCAGAATTGCTGCTTCAGCATAAAGCCTTGGTGAACACCACCGGCTACCAAAATGACTCACCACTTCACGATGCCGCCAGGAATGGGCACTTGGATATAGTGAGGCTCTTGCTGTCCTGTGGAGCCTCCAGGAATGCTGTTAACATATTTGGTCTGCGGCCTGTGGATTGTACAGACAGTGAAAATATGAAATCATTATTGCTGCTACCAGAGAAGAATGAATCATTCTCAACTAGCCATTGTTCAGTAAACACTGGGCAACGTAGAGATGGACCTCTTGTGCTTATAGGCAGTGGACTTTCTTCAGAACAACAGAAAATGCTTGGGGAGTTGGCAGCAATTCTTAAAGCTAAAAAATGCACCGAGTTTGACAGTACAGTAACTCACGTCATTATTCCTGGTAATGAAGCTCAGAGTACTCTCAAGTGTATGCTGGGGATTCTCAGTGGATGCTGGGTCCTGAAGTTTGACTGGGTGAAAGCATGTCTACAAAGAAAAGTCTGTGACCAGGAAGAAAAATACGAAATTCCTGAAGGTCCACAGAGAAGCAGGCTCAACAGAGAACAGATGTTGCCTAAGCTGTTTGATGGATGCTATTTCTATTTTGGGGGAACCTTCAAACATCATCCAAAGGACAATCTCATTAGGCTGGTTGCTGCAGCCGGGGGCCAGGTCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTTGCCTACCATGCCAAACCCAATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTATCTAATTATCGCCCAGAAAGGGTTAGGCAGGGTAAAGTCTGGATGGCTCCTTCCAGCTGGTTCATAAACTGCGTGATGTCCTTCAAGGTGCTTCCTCTTGACAGCTGA

Related Sequences

XP_004851159.1 Protein

Bard1 PREDICTED: BRCA1-associated RING domain protein 1 isoform X1 [Heterocephalus glaber]

Length: 774 aa      View alignments
>XP_004851159.1
MPGSRQPRVHSGNLPRPAPTMEQPAGGGAWAHSRAALVRLEQLLRCSRCTNILREPVCLGGCEHIFCSDCVSDCIGTRCPVCSTPAWILDVRINRQLDSMIQLYSKLRNLLHNDKFSDLKEDASRTNLFNDAENKKNSVKMWFSPRSKRVRYVVRKVSVQTKPQKTKDENAQQASMYEFVSATPPMVVSKRAKKASTTSAKKQQKKTLAEINQEWNLNREKEDDELDLKEEFKEKQVSFCSQPAIIGSPKVNGEIDLLASGSVTELESCGSLTEVFLPLAEHIESPDNDNMIEVSPEKACENDLTSKTSLPLGHNGKRGPCNRLSSPVSKKCRSSIPSTSGDVVRQTVLSENIALLDCSSPASGTLKVDDTLRRENDNVSDDSISLSPCTLPSTLNSSSYRRLMSSPSAMKLYPHGFMARKRNHRGETLLHIASIKGDVSSVEYLLQNGTDPNVKDNAGWTPLHEACNHGHLKVAELLLQHKALVNTTGYQNDSPLHDAARNGHLDIVRLLLSCGASRNAVNIFGLRPVDCTDSENMKSLLLLPEKNESFSTSHCSVNTGQRRDGPLVLIGSGLSSEQQKMLGELAAILKAKKCTEFDSTVTHVIIPGNEAQSTLKCMLGILSGCWVLKFDWVKACLQRKVCDQEEKYEIPEGPQRSRLNREQMLPKLFDGCYFYFGGTFKHHPKDNLIRLVAAAGGQVLSRKPKPDSDVTQTINTVAYHAKPNSDQRFCTQYIIYEDLSNYRPERVRQGKVWMAPSSWFINCVMSFKVLPLDS