Sequence details NCBI ID: XM_004851094.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fn1
Gene Name fibronectin 1, transcript variant X4
Entrez Gene ID 101718570

Database interlinks

Part of NW_004624765.1 (Scaffold)

For more information consult the page for NW_004624765.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FN1 ENSCPOG00000012808 (Guinea pig)

Gene Details

fibronectin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011528, Guinea pig)

Protein Percentage 94.67%
CDS Percentage 92.02%
Ka/Ks Ratio 0.106 (Ka = 0.028, Ks = 0.2637)

FN1 ENSG00000115414 (Human)

Gene Details

fibronectin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000346839, Human)

Protein Percentage 92.93%
CDS Percentage 90.28%
Ka/Ks Ratio 0.1089 (Ka = 0.0363, Ks = 0.3331)

Fn1 ENSMUSG00000026193 (Mouse)

Gene Details

fibronectin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054499, Mouse)

Protein Percentage 92.57%
CDS Percentage 87.29%
Ka/Ks Ratio 0.07395 (Ka = 0.039, Ks = 0.5276)

FN1 ENSRNOG00000014288 (Rat)

Gene Details

Fibronectin

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019772, Rat)

Protein Percentage 92.05%
CDS Percentage 87.19%
Ka/Ks Ratio 0.0844 (Ka = 0.0429, Ks = 0.5077)

Genome Location

Sequence Coding sequence

Length: 7434 bp    Location: 707871..775056   Strand: +
Raw sequence   
>XM_004851094.1
ATGCTCAGGGGTCCGGGGCCCGGGCTGCTGCTGCTGGCCGCCCTGTGCCTGGGGACGGCGGTGCTGTCCACCGGGGCCTCGAAGAGCAAGAGGCAGGCTCAGCAGATCGTGCAGCCCCAGTCCCCGGTGACTGTCAGTCAGAGCAAGCCTGGTTGCTATGACAATGGGAAACACTACCAGATAAACCAACAATGGGAGCGCACCTACCTAGGCAATGCCTTGGTTTGTACCTGTTATGGAGGGAGCCGAGGTTTTAACTGTGAAAGTAAACCTGAACCTGAAGAGACTTGCTTTGACAAGTATACTGGGAACACTTACCGAGTGGGTGACACTTACGAGCGCCCTAAAGATTCCATGATCTGGGACTGTACCTGCATCGGGGCTGGGCGCGGAAGAATAAGTTGCACCATTGCAAACCGCTGCCATGAAGGGGATCAGTCCTACAAGATCGGAGACACCTGGAGGAGACCACATGAGACTGGTGGCTACATGTTAGAGTGTGTGTGTCTCGGTAATGGGAAAGGAGAATGGACCTGCAAGCCAATAGCTGAGAAATGTTTTGATCATGCTGCTGGGACTTCCTATGTTGTTGGCGAGACCTGGGAAAAGCCCTATCAAGGCTGGATGATGGTGGATTGTACCTGTCTGGGAGAAGGCAGTGGACGTATCACTTGTACCTCTAGAAATAGGTGCAATGATCAGGACACAAGGACATCCTACAGAATTGGAGATACCTGGAGCAAGAAGGATAACCGAGGAAACCTGCTCCAGTGCATCTGCACAGGCAACGGCCGGGGGGAGTGGAAGTGTGAGAGACATGCATCTCTGCAGGCCGCGTCCACTGGATCTGGTGGCCCCTTCACGGATATCCGAGCAGCTGTCTACCAGCCCCAGCCTCAACCCCAACCGGTTCCATATGGTCACTGTGTCACAGACAGTGGCATGGTCTACTCTGTGGGGATGCAGTGGCTAAAGACACAAGGAAATAAACAAATGCTGTGCACCTGCCTGGGCAATGGCGTGAGCTGCCAGGAGACAGCTGTAACTCAGACATATGGTGGCAATTCAAATGGGGAGCCATGTGTGTTACCATTCACCTACAATGGTAGGACTTTCTACTCCTGCACATCAGAAGGGCGCCAGGATGGACATCTTTGGTGCAGCACAACTTCAAATTATGAGCAGGACCAGAAATATTCTTTCTGTACAGACCATACTGTTTTGGTCCAGACTCGAGGTGGAAATTCCAATGGTGCCCTGTGCCATTTCCCCTTCCTGTACAACAACCACAATTACACTGACTGTACTTCTGAGGGCAGGAGAGACAACATGAAATGGTGTGGGACCACGCAGAACTATGATGCCGACCAGAAATTTGGATTCTGTCCCATGGCTGCCCACGAGGAAATCTGCACAACCAATGAAGGGGTCATGTATCGCATTGGTGATCAGTGGGATAAACAGCATGACATGGGCCACATGATGAGGTGCACATGTGTTGGGAATGGTCGCGGGGAATGGACATGTGTCGCCTACTCCCAGCTCCGAGATCAGTGCATTGTTGATGACATTACTTACAATGTGAATGACACATTCCACAAGCGTCACGAGGAGGGACACATGCTGAACTGCACCTGCTTTGGTCAGGGAAGGGGCAGGTGGAAGTGCGATCCCATCGACCAATGCCAGGATTCAGAAACCCGAACATTTTATCAAATTGGAGACTCCTGGGAGAAGTATGTGCATCGTGTCAGGTATCAGTGCTATTGCTATGGCCGCGGCATTGGGGAATGGCACTGCCAGCCTTTGCAGACCTATGCAGGCACAAGTGGTCCTGTCCAAGTAATTATCACTGAGACTCCCAGCCAGCCCAACTCTCACCCCATCCAGTGGAACGCACCAGAGCCCTCACACATCACTCAGTACGTGCTCAGGTGGAGACCTAAAAATACTGCAGGCCATTGGAAGGAAGCTACCATTCCAGGCCACTTAAATTCATATACCATCAAAGGCCTGACCCCAGGCGTGGTATATGAGGGGCAGCTCATCAGCTACCAGCAGTATGGCCAAAGAGAGGTGACACGCTTTGACTTCACCACCAGCGCGAGCACTCCTGTGACCAGCAACACCGTGACAGGAGAGACAACACCCCTTTCTCCTGTTGTGGCCACTTCAGAATCTGTGACTGAAATCACAGCCAGCAGCTTCGTGGTCTCTTGGGTCTCAGCTTCGGACACTGTATCAGGATTCCGGGTGGAGTATGAGCTGAGTGAGGAGGGAGATGAACCACAGTACCTGGATCTTCCAAGCACAGCCACTTCTGTGAACATCCCTGACCTGCTTCCTGGCCGCAAGTATATTGTCAATGTCTATCAGATATCAGAGGAAGGAAAGCAGAGTTTGATCCTGTCCACTTCACAGACAACAGCTCCTGATGCCCCACCTAACCCTACGGTGGACCAAGTTGATGACACCTCCATTGTGGTTCGCTGGAGCAGACCCCAGGCACCCATCACAGGATACAGAATAGTCTATTCACCATCAGTAGAAGGCAGTAGCACAGAACTCAACCTGCCTGAAACTGCTGACTCCGTAACTCTCAGTGACTTGCAGCCTGGCATTCAGTATAACATCACTATCTATGCTGTGGAAGAAAACCAAGAAAGCACTCCTGTTTTCATCCAACAAGAAACTACTGGGGTTCCCCGTTCAGATAAAGTTTCCCCTCCCAGGGACCTGCAGTTCGTGGAAGTGACAGACGTGAAGGTCACCATCATGTGGACACCTCCTGATAGTGCAGTGACCGGCTACCGTGTAGAGGTGCTCCCCGTGAACCTGCCTGGGGAGCATGGCCAGAGGCTGCCTGTCAACAGGAACACCTTTGCAGAAGTGACCGGGCTATCCCCTGGGGTCACTTATTACTTCAAAGTCTTTGCTGTGAACCACGGGAGGGAGAGCAAGCCTCTGACTGCACAGCAGATGACCAAACTGGATGCTCCTACTAACCTCCAATTTACCAATGAAACTGACACGACGGTTCTGGTGATTTGGATACCACCTCGGGCCAAGATTACAGGCTACCGGCTGATTGTGGGCCTGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGGGGCCCTCTGCCTCCAAGTACCCACTGCGGAACCTGCAACCTGGCTCAGAGTACTCTGTGTCCCTTGTGGCCATAAAAGGCAACCAGCAGAGCCCCAAAGCTACTGGAGTCTTCACTACTCTGCAACCTGGGAGCTCCATTCCGCCTTACAACACAGAGGTGACTGAGACCACCATTGTGATCACATGGACCCCTGCTCCAAGGATTGGTTTTAAGCTGGGTGTACGACCAAGCCAGGGAGGTGAGGCCCCACGAGAAGTGACTTCAGACTCAGGAAGCATCGTTGTGTCTGGCTTGACTCCAGGCGTGGAATACATTTATACCATCCAAGTTCTGAGAGACGGGCAAGAAAGGGATGCACCAATTGTAAACAGAGTGGTGACACCATTATCTCCACCCACAAACTTGCACCTAGAAGTAAACCCTGATACTGGTGTGCTTACAGTCTCCTGGGAGAGGAGCACCACCCCAGATATTACTGGTTATAGAATTACCACCACCCCTACAAATGGGCAGCAGGGATATTCTTTGGAAGAGGTGGTTCATGCTGATCAGAGTTCCTGCATTTTTGAAAACCTGAGTCCTGGCCTGGAATACAATGTCAGTGTTTACACTGTCAAAGATGACAAGGAAAGTGTTCCTATCTCTGATACCATCATCCCAGAGGTGCCCCAGCTCACTGACCTAAGTTTTGTTGATATAACCGATTCAAGCATCGGCCTGAGGTGGACCCCGCTAAACTCTTCCACCATTATTGGGTACCGCATCACAGTAGTTGCAGCAGGCGAAGGGATCCCTATTTTTGAAGATTTTGTGGACTCCTCAGTAGGATACTACACAGTTACAGGGCTGGAGCCGGGCATTGACTATGACATCAGCGTTATCACTCTCATTAATGGCGGAGAGAGTGCCCCTACTACACTGACACAGCAAACGGCTGTCCCTCCTCCCACTGACTTACGGTTCACCAATATTGGTCCAGACACTATGCGTGTCACCTGGGCCCCACCTCCATCCATTGAGCTGACCAACTTCGTGCTGCGCTACTCACCTGTGAAAAATGAGGAGGATGTTGCAGAGTTGTCAATTTCTCCTTCAGACAATGCAGTGGTCTTAACAAACCTGCTGCCTGGGACCGATTATTTAATCAGTGTCTCCAGTGTCTATGAGCAACACGAGAGCATCCCTCTTAGAGGAAGACAGAAAACAGGTCTTGATTCCCCAACTGGAATTGACTTTTCTGATATCACTGCCAACTCTTTCACTGTTCATTGGATTGCTCCTCGAGCTTCCATCACTGGCTACAAAATTCGCCATCATCCTGAGCATCTTAGCGGAAGACCCCGAGAAGATCGAGTGCCCCCCTCTCGGAATTCCATCACCCTCACCAACCTCAATCCAGGCACAGAGTATGTGGTCAGCATTGTTGCTGTTAATGGCAGAGAGGAAAGCCCTGTCTTGATTGGTCAACAATCAACAATTTCTGATGTTCCAAGGGACCTGACAGTCATTGCTTCCAGCCCCACCAGTGTAATGATCCAATGGGATGCTCCTGGTGTCACAGTGCGGTATTACAGGATCACTTATGGAGAAACAGGAGGGAGTAGCCCTGTCCAGGAGTTCACTGTGCCTGGGACCAAGACCATGGCTACGATCAGCAACCTGAAGCCTGGAGCAGATTATACCATCACTTTGTATGCTGTCACTGGCCGTGGGGACAGCCCTGCCAGCAGCAAGCCAATTTCCATAGATTATCAAACAGAAATTGACAAGCCATCCCAGATGCAAGTGACTGATGTTCAGGATAACAGCATTAGCGTCAGGTGGCTGCCTTCAAATTCTCCTGTTACTGGTTACAAAGTGACCACTACTCCCAAAAATGGCTCAGGACCATCAAAAACTGAAACTGTAGGTCCAGATCAAACAGAAATGACCATCGAAGGCTTACAGCCCACTGTGGAGTATGTGGTTAGTGTCTATGCTCAAAATCGGAATGGAGAGAGCCAGCCCTTGGTTCAAACTGCAGTAACCAACATTGATCGCCCTAAAGGACTGGCATTCACTGATGTGGATGTCGATTCCATCAAAATTGCTTGGGAAAGCCCACAGGGGCAAGTTTCCAGGTACAGGGTGACCTACTCAAGCCCTGAGGATGGAATCCATGAGCTATTCCCTGCACCTGATGGTGAAGAAGATACTGCCGAGCTGCAAGGCCTCAGACCGGGTTCTGAGTACACAGTCAGTGTGGTTGCCTTGCACGATGATATGGAGAGCAAGCCCCTGATTGGAACCCAGTCCACAGCCATTCCTGCACCAACCAACCTGAAGTTTACTCAGGTTACACCCACAAGCCTGAGCGCCCAGTGGACAGCACCCAACGTCCAGCTCACTGGATATCGAGTGCGGGTGACACCCAAGGAAAAGACTGGACCCATGAAAGAAATTAACCTTTCTCCTGACAGCTCATCAGTGGTTGTGTCAGGACTCATGGTGGCCACCAACTATGAAGTGAGCATCTATGCTCTCAAAGACACACTGACAAGCAGACCAGCTCAAGGAGTTGTCTCCACTCTGGAGAATGTCAGCCCTCCCAGAAGGGCCCGTGTGACAGATGCTACTGAGACCACCATCACAATAAGCTGGCGCACCAAGACCGAGACCATCACTGGCTTCCAAGTGGATGCCATCCCAGCCACTGGCCAGACCCCAGTGCAGAGGACCATTAGCCCAGATATCAGAAGCTATACCATCACAGGTCTACAACCAGGCACTGACTACAAGATCCACTTGTACACCCTGAACAACAATGCTCGGAGCTCCCCTGTGATCATTGATGCTTCCACTGCCATTGATGCACCATCCAACCTGCGTTTCTTGACTACCACACCCAACTCCTTGCTGGTATCATGGCAGCCACCTCGGGCCAGGATTACTGGCTACATCATCAAGTATGAGAAGCCTGGGTCCCCTCCCAGAGAAGTAGTCCCTCGGCCCCGCCCTGGTGTCACAGAGGCCACTATTATTGGCCTGGAACCAGGAACTGAGTACACAATCTATGTCATTGCCCTGAAGAACAACCAGAAGAGCGAGCCTCTTATTGGGAGGAAAAAGACAGATGAGCTTCCCCAGCTGGTCACCCTTCCACACCCTAATCTTCATGGACCAGAGATCTTGGATGTTCCCTCCACAGTTCACAAGACCCCTTTCATCACCAACTCTGGGGATCACACTGGAAACGGTATTCAGCTTCCTGGCACATCCCCACAGCAGCCCACTGTTGGGCAACAGATGATCTTTGAGGAACATGGTTTTAGGAGGACCACACCACCCACAGCAGCCACCCCTGTAAGGCATAGGCCAAGACCGTACACACCGAACGTAGATGAGGAGATGGAAATTGGTCACGTCCCCAGGGGAGATGTAGACCACTACCTCTATCCTCATGTTCTGGGGCTCAATCCAAATGCCTCTACAGGACAAGAAGCTCTCTCTCAGACAACCATCTCCTGGACCCCATTCCAGGAAAGTTCTGAGTACATCATTTCATGTCATCCTGTTGGCATTGACGAGGACCTCTTACAGTTCCGAGTTCCTGGAACTTCCACCAGTGCCACTCTGACAGGCCTGACCAGAGGGGCCACATACAACATCATAGTAGAGGCACTGAAAGACCAGAGAAGGCACAAGGTTCGGGAGGAAGTGGTGACTGTGGGCAACTCTGTCAATGAAGGCCTGAACCAACCTACTGATGACTCCTGCTTTGACCCCTACACAGTTTCCCACTATGCCATTGGAGAGGAGTGGGAGCGATTGTCTGAAGCTGGCTTTAAACTTACATGCCAGTGCTTAGGCTTTGGCAGTGGTCATTTCAGATGCGATTCATCTAAATGGTGCCATGACAATGGTGTGAACTACAAGATTGGAGAGAAGTGGGATCGCCAGGGAGAGAATGGTCAGATGATGAGCTGCACATGTCTCGGGAACGGAAAAGGGGAATTCAAGTGTGATCCTCATGAGGCAACGTGTTATGATGACGGGAAGATATACCATGTAGGAGAACAATGGCAGAAGGAATACCTTGGTGCCATTTGCTCTTGCACTTGCTTTGGAGGACAGCGGGGCTGGCGCTGTGACAACTGCCGCAGACCTGGGGCCGAACCCGGTCCTGAAGGCTCCACTGGCCACTCCTACAACCAGTACACACAGAGATACCATCAGAGAACGAACACTAATGTTAACTGCCCAATCGAGTGCTTCATGCCTTTAGATGTCCAGGCTGACAGAGAAGATTCTAGAGAGTAA

Related Sequences

XP_004851151.1 Protein

Fn1 PREDICTED: fibronectin-like isoform X4 [Heterocephalus glaber]

Length: 2477 aa      View alignments
>XP_004851151.1
MLRGPGPGLLLLAALCLGTAVLSTGASKSKRQAQQIVQPQSPVTVSQSKPGCYDNGKHYQINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSMIWDCTCIGAGRGRISCTIANRCHEGDQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHASLQAASTGSGGPFTDIRAAVYQPQPQPQPVPYGHCVTDSGMVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCVLPFTYNGRTFYSCTSEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRIGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHMLNCTCFGQGRGRWKCDPIDQCQDSETRTFYQIGDSWEKYVHRVRYQCYCYGRGIGEWHCQPLQTYAGTSGPVQVIITETPSQPNSHPIQWNAPEPSHITQYVLRWRPKNTAGHWKEATIPGHLNSYTIKGLTPGVVYEGQLISYQQYGQREVTRFDFTTSASTPVTSNTVTGETTPLSPVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTTAPDAPPNPTVDQVDDTSIVVRWSRPQAPITGYRIVYSPSVEGSSTELNLPETADSVTLSDLQPGIQYNITIYAVEENQESTPVFIQQETTGVPRSDKVSPPRDLQFVEVTDVKVTIMWTPPDSAVTGYRVEVLPVNLPGEHGQRLPVNRNTFAEVTGLSPGVTYYFKVFAVNHGRESKPLTAQQMTKLDAPTNLQFTNETDTTVLVIWIPPRAKITGYRLIVGLTRGGQPKQYNVGPSASKYPLRNLQPGSEYSVSLVAIKGNQQSPKATGVFTTLQPGSSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYIYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEVNPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCIFENLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIELTNFVLRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTDYLISVSSVYEQHESIPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRASITGYKIRHHPEHLSGRPREDRVPPSRNSITLTNLNPGTEYVVSIVAVNGREESPVLIGQQSTISDVPRDLTVIASSPTSVMIQWDAPGVTVRYYRITYGETGGSSPVQEFTVPGTKTMATISNLKPGADYTITLYAVTGRGDSPASSKPISIDYQTEIDKPSQMQVTDVQDNSISVRWLPSNSPVTGYKVTTTPKNGSGPSKTETVGPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESKPLIGTQSTAIPAPTNLKFTQVTPTSLSAQWTAPNVQLTGYRVRVTPKEKTGPMKEINLSPDSSSVVVSGLMVATNYEVSIYALKDTLTSRPAQGVVSTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAIPATGQTPVQRTISPDIRSYTITGLQPGTDYKIHLYTLNNNARSSPVIIDASTAIDAPSNLRFLTTTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVPRPRPGVTEATIIGLEPGTEYTIYVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEILDVPSTVHKTPFITNSGDHTGNGIQLPGTSPQQPTVGQQMIFEEHGFRRTTPPTAATPVRHRPRPYTPNVDEEMEIGHVPRGDVDHYLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCHPVGIDEDLLQFRVPGTSTSATLTGLTRGATYNIIVEALKDQRRHKVREEVVTVGNSVNEGLNQPTDDSCFDPYTVSHYAIGEEWERLSEAGFKLTCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPHEATCYDDGKIYHVGEQWQKEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGPEGSTGHSYNQYTQRYHQRTNTNVNCPIECFMPLDVQADREDSRE