Details from NCBI annotation

Gene Symbol Lrrc38
Gene Name leucine rich repeat containing 38
Entrez Gene ID 101722558

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC38 ENSCPOG00000021903 (Guinea pig)

Gene Details

leucine rich repeat containing 38

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018624, Guinea pig)

Protein Percentage 92.93%
CDS Percentage 91.25%
Ka/Ks Ratio 0.053 (Ka = 0.0339, Ks = 0.6401)

LRRC38 ENSG00000162494 (Human)

Gene Details

leucine rich repeat containing 38

External Links

Gene Match (Ensembl Protein ID: ENSP00000365253, Human)

Protein Percentage 88.78%
CDS Percentage 88.78%
Ka/Ks Ratio 0.07174 (Ka = 0.0535, Ks = 0.7452)

Lrrc38 ENSMUSG00000028584 (Mouse)

Gene Details

leucine rich repeat containing 38

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053597, Mouse)

Protein Percentage 89.93%
CDS Percentage 84.56%
Ka/Ks Ratio 0.04028 (Ka = 0.0547, Ks = 1.3567)

Lrrc38 ENSRNOG00000015264 (Rat)

Gene Details

leucine rich repeat containing 38 (Lrrc38), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020483, Rat)

Protein Percentage 90.85%
CDS Percentage 86.33%
Ka/Ks Ratio 0.03757 (Ka = 0.0475, Ks = 1.2644)

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location: 163425..82137   Strand: -
>XM_004851057.1
ATGAGCAGGGCGGGAGCGCGGGCTCGAGGTGGTCTCAGCCCGGCCTCTGGGACCGCCCTCGGGCTCTGTTTGGCCCGCGCCCAGACGGCAGACTGCTCTGCCTCATTCCCCAAATTTCTCATTAGATCTGGGATAGGGCCTGAGAATCTGCATTCCCGGGGCAACGACGATGATGATGATGATGATGACGACGAAGAAGAAGACTACAATGAAGACAGTGATGGTATTGTGAGCGGGAGAGCCCTTTGGCACGGGCAGACACCGGGCCACGGGGCGCATGCCCCGGACACGTCCTGCGGGCACCGCTCTCTGGCTGGGCCACTGAACTTAGTCGAGAGCGCCGCTGGCCAAGTCCGCGAGACAGGTCTTACTTCCCGGGCCGCAGTGGCGACAGCCTCCAGGCCTCCCTGCAGCTCCCGCCGCTCCCCGGGATTGTCCAGCCTGTTAATTTCCTGCTCTGGTAAATCCTCTCGCGAGCGTCTCTCCCCCTCCCTCCAGTCTCTGCCCCCTGCCGCCCCACACCGGGGTCTGGCCTCGCCGCTCTGCTTCGCGCCCGGGCGCACTCCCTCCCCGCCCCTGCCGCCCTCCTGCTCCCCGCACCCTGCCTCCGGGGCCCCTCTGCGCCGCCGCCAGCCTCACCCAGTCCCGGTCGCCGAGCCGCCCCGGGGCCCTGCCATGCTTCCCCGCGCTGTCCCCCGCCGCCCCAAAGCGGTGCTCGCGCTCTGCAGCCTCCTGATGCTGCTCGGGCCCGGGCTTGGCTGCCCCGCTGGCTGCGCCTGCACCGACCCGCACACCGTGGACTGCCGCGACCGCGGGCTGCCCAGCGTGCCCGACCCCTTCCCGCTGGACGTGCGCAAGCTACTGGTGGCCGGCAACCACATCCAGCAGATCCCCGAGGACTTCTTCATCTTCTATGGCGACCTGGTGTACCTAGACTTCAGGAACAACTCTCTGCGCTCACTGGAGGAGGGCACGTTCAGCGGCTCTGCCAAGCTCGCCTTCCTGGACCTCAGCTATAACAACCTTACGCAGCTGGGCGCCGGGGCCTTTCGCTCCGCCGGGAGGCTGGTCAAGCTGAGCTTGGCCAACAACAACCTGGCGGGCGTGCACGAGGCCGCCTTCGAGACACTGGAGTCGCTGCAGGTTCTGGAGCTCAATGACAACAACCTGCGCAGCCTCAGCGTGGCCATCCTGGACGCGCTGCCCGCCCTGCGCACCCTGCGCCTGGACGGGAACCCCTGGCTGTGCGACTGTGACTTCGCCCACCTCTTCTCCTGGATCCAGGAGAACCCGTCCAAACTGCCCAAAGGCCTGGATGGGATCCAGTGCTCCCTGCCCTCTGAGAGCCGGAGGGTGGCCCTGCATGAGCTGTCTGAGGCCAGCTTCAGTGAGTGCAAGTTCACCCTGTCACTCACGGACCTGTTCATCATCATCTTCTCAGGTGTTGCTGTCTCCATTGCCGCCATCATCTCTAGCTTCTTCCTGGCCACCGTGGTACAGTGCTTCCAGAGGTGCACCCCCAACAAAGACACTGAGGATGAGGATGAGGATGAGGATGACTGA

Related Sequences

XP_004851114.1 Protein

Lrrc38 PREDICTED: leucine-rich repeat-containing protein 38 [Heterocephalus glaber]

Length: 520 aa      View alignments
>XP_004851114.1
MSRAGARARGGLSPASGTALGLCLARAQTADCSASFPKFLIRSGIGPENLHSRGNDDDDDDDDDEEEDYNEDSDGIVSGRALWHGQTPGHGAHAPDTSCGHRSLAGPLNLVESAAGQVRETGLTSRAAVATASRPPCSSRRSPGLSSLLISCSGKSSRERLSPSLQSLPPAAPHRGLASPLCFAPGRTPSPPLPPSCSPHPASGAPLRRRQPHPVPVAEPPRGPAMLPRAVPRRPKAVLALCSLLMLLGPGLGCPAGCACTDPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNHIQQIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLAGVHEAAFETLESLQVLELNDNNLRSLSVAILDALPALRTLRLDGNPWLCDCDFAHLFSWIQENPSKLPKGLDGIQCSLPSESRRVALHELSEASFSECKFTLSLTDLFIIIFSGVAVSIAAIISSFFLATVVQCFQRCTPNKDTEDEDEDEDD