Details from NCBI annotation

Gene Symbol Rspo1
Gene Name R-spondin 1, transcript variant X1
Entrez Gene ID 101699220

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RSPO1 ENSCPOG00000003953 (Guinea pig)

Gene Details

R-spondin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003570, Guinea pig)

Protein Percentage 91.67%
CDS Percentage 92.8%
Ka/Ks Ratio 0.1642 (Ka = 0.0396, Ks = 0.2412)

RSPO1 ENSG00000169218 (Human)

Gene Details

R-spondin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000348944, Human)

Protein Percentage 87.79%
CDS Percentage 88.3%
Ka/Ks Ratio 0.12291 (Ka = 0.0598, Ks = 0.4863)

Rspo1 ENSMUSG00000028871 (Mouse)

Gene Details

R-spondin homolog (Xenopus laevis)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030687, Mouse)

Protein Percentage 89.27%
CDS Percentage 87.61%
Ka/Ks Ratio 0.07996 (Ka = 0.0506, Ks = 0.6333)

Rspo1 ENSRNOG00000009656 (Rat)

Gene Details

R-spondin 1 (Rspo1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012811, Rat)

Protein Percentage 87.36%
CDS Percentage 87.48%
Ka/Ks Ratio 0.09489 (Ka = 0.0557, Ks = 0.5868)

Genome Location

Sequence Coding sequence

Length: 798 bp    Location: 20359264..20342365   Strand: -
>XM_004850986.1
ATGCGGCTTGGGCTGTGTGTGGTGGCCCTGGTTCTGAGCTGGACACACCTCACCGCCAGCAGCCGAGGGGTCAAGGGGAAGAGGCAGAGGCGGATCAGTGCTGAGGGGAGCCAAGCCTGTGCCAAGGGCTGTGAGCTCTGCTCCGAGGTCAACGGCTGCCTCAAGTGTTCACCCAAGCTGTTCATCCTGCTGGAGCGGAACGACATCCGCCAGGTGGGCGTCTGCTTGCAGTCCTGTCCGCCTGGATACTTTGACGCCCGCAACCCCGACATGAACAAGTGCATCAAATGCAAGATTGAGCACTGTGAGGCCTGCTTCAGCCACAACTTCTGCACCAAGTGTCAGGAGGGCCAGTATTTGCACAAGGGTCGCTGCTACCCAACCTGTCCTGAGGGCTCCACCCCCACAAATGGCACCATGGAGTGCAGCAGTCCTGCACAATGTGAAATGAGTGAATGGTCCCCGTGGGGGCCCTGCTCCAAGAAGAAGAAGCTCTGTGGCTTCCGGAAGGGCTCTGAGGAGCGGACACGCAGAGTGCTCCATGCTCCTGGGGGGGACCACACCACCTGCTCTGAGACCAAGGAGACCCGAAGGTGCACAGTGCGGAGGATGCCATGCCCTGATGGACAGAAGAGGAGGAAGGGAGGCCAGGGCCGACGGGAGAACGCCTACAGGAACCCCAGCAGGAAGAACAAGGAGACCAGCCCAAGCTCTCGGAGACACAGAGGACAGCAGCAGCTGCCAGAGCAGCCACAGCCAGGGACAGTGGGGCCACTCACGTCTGCTGGGCCCAGCTAA

Related Sequences

XP_004851043.1 Protein

Rspo1 PREDICTED: R-spondin-1 isoform X1 [Heterocephalus glaber]

Length: 265 aa      View alignments
>XP_004851043.1
MRLGLCVVALVLSWTHLTASSRGVKGKRQRRISAEGSQACAKGCELCSEVNGCLKCSPKLFILLERNDIRQVGVCLQSCPPGYFDARNPDMNKCIKCKIEHCEACFSHNFCTKCQEGQYLHKGRCYPTCPEGSTPTNGTMECSSPAQCEMSEWSPWGPCSKKKKLCGFRKGSEERTRRVLHAPGGDHTTCSETKETRRCTVRRMPCPDGQKRRKGGQGRRENAYRNPSRKNKETSPSSRRHRGQQQLPEQPQPGTVGPLTSAGPS