Sequence details NCBI ID: XM_004850942.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ago1
Gene Name argonaute RISC catalytic component 1, transcript variant X1
Entrez Gene ID 101715713

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AGO1 ENSCPOG00000011568 (Guinea pig)

Gene Details

argonaute RISC catalytic component 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010405, Guinea pig)

Protein Percentage 99.88%
CDS Percentage 96.41%
Ka/Ks Ratio 0.00354 (Ka = 0.0005, Ks = 0.1528)

AGO1 ENSG00000092847 (Human)

Gene Details

argonaute RISC catalytic component 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000362300, Human)

Protein Percentage 100.0%
CDS Percentage 94.98%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2213)

Ago1 ENSMUSG00000041530 (Mouse)

Gene Details

argonaute RISC catalytic subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095498, Mouse)

Protein Percentage 100.0%
CDS Percentage 93.39%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3223)

Ago1 ENSRNOG00000027320 (Rat)

Gene Details

eukaryotic translation initiation factor 2C, 1 (Eif2c1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036978, Rat)

Protein Percentage 99.88%
CDS Percentage 93.12%
Ka/Ks Ratio 0.00156 (Ka = 0.0005, Ks = 0.3417)

Genome Location

Sequence Coding sequence

Length: 2574 bp    Location: 18904639..18940594   Strand: +
Raw sequence   
>XM_004850942.1
ATGGAAGCGGGACCCTCGGGAGCAGCTGCGGGGGCCTATCTGCCCCCCCTGCAGCAGGTGTTCCAGGCACCTCGTCGGCCTGGCATTGGCACTGTGGGGAAACCAATCAAGCTCCTGGCCAATTACTTTGAGGTGGATATTCCTAAGATCGACGTCTACCACTACGAGGTGGACATCAAGCCTGATAAGTGTCCTCGCCGAGTCAACCGGGAAGTGGTGGAATACATGGTCCAGCATTTCAAGCCGCAGATCTTTGGTGATCGCAAGCCCGTGTATGATGGAAAGAAGAACATTTATACTGTCACTGCACTGCCCATTGGCAACGAAAGGGTCGACTTTGAGGTGACAATCCCTGGGGAGGGGAAGGATCGAATCTTTAAGGTCTCTATCAAGTGGCTAGCTATTGTGAGCTGGCGCATGCTGCATGAGGCCCTGGTCAGTGGCCAGATCCCTGTTCCCCTGGAGTCTGTGCAAGCCCTGGATGTGGCCATGAGACATCTGGCATCCATGAGGTACACCCCTGTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTACTACCACCCGCTGGGGGGTGGGCGCGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCCTGCCATGTGGAAGATGATGCTCAACATTGATGTCTCAGCCACTGCCTTCTACAAGGCACAGCCAGTGATTGAATTCATGTGTGAAGTACTGGACATCAGGAACATAGATGAGCAGCCCAAGCCTCTCACAGACTCCCAGCGTGTTCGCTTTACCAAGGAGATCAAGGGCCTGAAGGTGGAAGTGACCCACTGTGGACAGATGAAGAGGAAATACCGCGTGTGTAATGTTACCCGCCGCCCTGCTAGCCATCAGACGTTTCCCTTACAGCTGGAGAGTGGACAGACTGTGGAGTGCACAGTGGCACAATATTTCAAACAGAAATATAACCTTCAGCTCAAGTATCCCCACCTTCCCTGCCTGCAAGTTGGCCAGGAACAAAAGCATACCTACCTGCCTCTAGAGGTGTGTAATATTGTAGCTGGGCAGCGCTGCATTAAGAAGCTGACTGACAACCAGACTTCAACCATGATAAAGGCTACAGCTAGGTCGGCTCCAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGAATGCCAGCTACAACCTAGATCCCTACATCCAAGAATTTGGAATCAAAGTGAAGGATGACATGACGGAGGTGACAGGGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAACCGGGCCATTGCCACACCCAACCAAGGTGTCTGGGACATGCGGGGAAAACAGTTCTACAATGGGATTGAAATCAAAGTCTGGGCCATCGCCTGCTTCGCTCCACAAAAACAGTGTCGAGAAGAGGTGCTCAAGAACTTCACAGACCAGCTGCGAAAGATTTCCAAGGATGCAGGGATGCCCATCCAGGGTCAGCCGTGTTTCTGCAAATATGCCCAGGGAGCAGACAGTGTGGAACCCATGTTTCGGCATCTCAAGAACACCTACTCAGGGCTGCAACTCATTATCGTCATCCTGCCAGGGAAGACGCCAGTATATGCTGAAGTGAAACGTGTTGGAGATACACTTTTGGGAATGGCAACACAGTGTGTGCAGGTGAAGAATGTGGTGAAGACCTCGCCTCAGACTCTGTCCAACCTCTGTCTCAAGATCAATGTCAAACTTGGTGGCATTAACAACATCCTAGTCCCACACCAGCGCTCTGCTGTCTTTCAACAGCCAGTGATATTCCTGGGAGCAGATGTTACACATCCCCCAGCAGGGGATGGGAAAAAACCTTCTATCACAGCAGTAGTAGGCAGTATGGATGCCCACCCCAGCCGATATTGTGCCACTGTGCGAGTGCAGCGACCACGGCAGGAGATCATTGAAGACTTGTCCTACATGGTGCGTGAGCTACTCATCCAGTTCTACAAATCTACCCGCTTCAAGCCTACCCGCATCATCTTTTATCGAGATGGGGTCCCTGAAGGCCAGCTGCCCCAGATCCTCCACTATGAGCTGCTGGCCATTCGTGATGCCTGCATCAAACTGGAAAAGGACTACCAGCCTGGGATCACTTATATTGTGGTGCAGAAACGCCATCACACCCGCCTTTTTTGTGCTGACAAGAACGAGCGAATTGGGAAGAGTGGTAACATCCCAGCTGGAACCACTGTGGACACCAACATCACCCACCCTTTTGAGTTTGACTTCTATCTGTGCAGCCACGCAGGCATTCAGGGCACCAGCCGACCATCCCATTATTATGTTCTTTGGGATGACAACCGTTTCACAGCGGATGAGCTCCAGATCTTGACATACCAGCTGTGCCACACTTATGTACGATGCACACGTTCCGTCTCTATCCCAGCACCAGCCTACTATGCCCGCCTGGTGGCTTTCCGGGCACGATACCACCTGGTGGACAAGGAGCATGACAGTGGAGAAGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGCTGTGCAGGTCCACCAGGACACTCTTCGCACCATGTACTTCGCTTGA

Related Sequences

XP_004850999.1 Protein

Ago1 PREDICTED: protein argonaute-1 isoform X1 [Heterocephalus glaber]

Length: 857 aa      View alignments
>XP_004850999.1
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQALAKAVQVHQDTLRTMYFA