Sequence details NCBI ID: XM_004850909.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gjb5
Gene Name gap junction protein, beta 5, 31.1kDa
Entrez Gene ID 101704215

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GJB5 ENSCPOG00000009613 (Guinea pig)

Gene Details

gap junction protein, beta 5, 31.1kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008629, Guinea pig)

Protein Percentage 89.74%
CDS Percentage 90.11%
Ka/Ks Ratio 0.13725 (Ka = 0.0492, Ks = 0.3584)

GJB5 ENSG00000189280 (Human)

Gene Details

gap junction protein, beta 5, 31.1kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000340811, Human)

Protein Percentage 83.15%
CDS Percentage 84.37%
Ka/Ks Ratio 0.15547 (Ka = 0.0961, Ks = 0.6182)

Gjb5 ENSMUSG00000042357 (Mouse)

Gene Details

gap junction protein, beta 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045325, Mouse)

Protein Percentage 74.91%
CDS Percentage 79.21%
Ka/Ks Ratio 0.19845 (Ka = 0.154, Ks = 0.7762)

Gjb5 ENSRNOG00000014408 (Rat)

Gene Details

gap junction protein, beta 5 (Gjb5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019315, Rat)

Protein Percentage 75.65%
CDS Percentage 80.07%
Ka/Ks Ratio 0.18566 (Ka = 0.1426, Ks = 0.7681)

Genome Location

Sequence Coding sequence

Length: 822 bp    Location: 17808161..17811372   Strand: +
Raw sequence   
>XM_004850909.1
ATGAACTGGGGAGTCTTCGAGGCACTCCTGAATGGGGTCAACAAGTACTCCACAGCGTTTGGGCGCATTTGGCTGTCTTTGGTTTTCATCTTCCGAGTGCTGGTGTACTTGGTGACAGCTGAGCGTGTGTGGAGTGACGACCACAAGGATTTTGACTGCAACACCCGCCAGCCGGGCTGCTCCAACGTCTGCTTTGACCAGTTCTTCCCCGTGTCCCACGTGCGCCTCTGGGCCCTGCAGCTCATCCTGGTCACATGCCCCTCGCTGCTCGTGGTCATGCACGTGGCCTACCGCAAAGCTCAGGAGAAGAAGCATCTAGAGGTGGCTGGGGAGGATGGTGGGCGACTCTACCCAGACCCTGGCAAGAAGCGGGGCGGGCTCTGGTGGACATATGTCTGCAGCCTGGTCTTTAAGGCCGGCATAGATGTCACCTTCCTCTATGTGTTCCACTCCTTCTATCCCAAATACATCCTCCCTCCTGTGGTCAAGTGCCACTTGGCTCCCTGTCCCAACACAGTGGACTGCTTCATCTCCAAGCCCTCAGAAAAGAACATCTTCACTCTCTTTATGGTGGTCACAGCTGCTGTCTGCATCCTGCTCAACCTTGTGGAGCTGTCCTACCTAGTGAGCAAGCGGTGTAGGGAGTGCCTGGCAGCAAGGAGAGCTCGGGCCACACCTGGGGGGCATTACCCAAACTATGTCGCTGCTTCCTGCAAACAGAACGACCTCCTCTCAGGCGACCTCATCTTTCTGGGTTCTGACACTCTCCCCCCTCTCATGCAAGACTGCCCCCGAGACTATGTGAAGAAAACTGTCGTGTGA

Related Sequences

XP_004850966.1 Protein

Gjb5 PREDICTED: gap junction beta-5 protein [Heterocephalus glaber]

Length: 273 aa      View alignments
>XP_004850966.1
MNWGVFEALLNGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGCSNVCFDQFFPVSHVRLWALQLILVTCPSLLVVMHVAYRKAQEKKHLEVAGEDGGRLYPDPGKKRGGLWWTYVCSLVFKAGIDVTFLYVFHSFYPKYILPPVVKCHLAPCPNTVDCFISKPSEKNIFTLFMVVTAAVCILLNLVELSYLVSKRCRECLAARRARATPGGHYPNYVAASCKQNDLLSGDLIFLGSDTLPPLMQDCPRDYVKKTVV