Details from NCBI annotation

Gene Symbol Bsdc1
Gene Name BSD domain containing 1, transcript variant X4
Entrez Gene ID 101716154

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BSDC1 ENSCPOG00000007125 (Guinea pig)

Gene Details

BSD domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006424, Guinea pig)

Protein Percentage 89.26%
CDS Percentage 89.82%
Ka/Ks Ratio 0.28163 (Ka = 0.0686, Ks = 0.2437)

BSDC1 ENSG00000160058 (Human)

Gene Details

BSD domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000397759, Human)

Protein Percentage 88.99%
CDS Percentage 88.45%
Ka/Ks Ratio 0.20196 (Ka = 0.0669, Ks = 0.3311)

Bsdc1 ENSMUSG00000040859 (Mouse)

Gene Details

BSD domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048742, Mouse)

Protein Percentage 89.36%
CDS Percentage 87.31%
Ka/Ks Ratio 0.16217 (Ka = 0.0668, Ks = 0.4118)

Bsdc1 ENSRNOG00000008338 (Rat)

Gene Details

BSD domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011054, Rat)

Protein Percentage 75.12%
CDS Percentage 76.53%
Ka/Ks Ratio 0.30595 (Ka = 0.201, Ks = 0.6569)

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location: 15602714..15574795   Strand: -
>XM_004850856.1
ATGGCGGAAGGGGAGGACGTGGGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAGGCAGTCAAAGAGAAGTCCTCCGAAGCTTTGGAGTTCATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTACAGCACGACACAGCATGTACCATCGCAGCCACAGCCAGCGTGGTCAAGGAGAAGCTGACTACCGAAGGCTCCTCAGGGGCGACAGAAAAAATGAAGAAGGGATTGTCGGACTTCCTTGGGGTGATCTCAGACACCTTTGCCCCCTCGCCGGACAAAACCATCGACTGTGATGTAATCACCCTCATGGGCACACCCTCTGGCACGGCTGAGCCCTATGATGGCACCAAGGCTCGCCTTTATAGCCTGCAGTCAGACCCAGCAACGTACTGCAACGAACCTGATGGGCCCCTGGAATTGTTTGACACCTGGCTTTCCGAGTTCTGCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTTCTTGTAGACAGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGTATTTCTATAAGGTCCATCAGCTAGAACAGGAGCAGGCCCGGAGAGATGCCCTGAAGCAGCGGGCAGAACAGAGCCTCTCTGAAGAACCTGGCTGGGAGGAGGAAGAAGAGGAACTCGTGGGCATTTCACCCACGTCTCCAAAGGAGGTGAAGGTTCCTGTGACCAAAACTTCCACATCCTCTGAGAAGGAGACTCACCCCTGTGAAGAGACTCCAGTGCCTGCAGTTGAGCCCCCAGCAGAGGTGACTCCTTCAGAGAGCAGCGAGAGCATCTCCCTTGTGACGCAGATTGCCAACCTTGCCACCGTACTTGAGGTGCCAGTGCTGCCCAAAAACCTGTCTCAAAAGCTGCTGGAGGCATCTTTGGAAGAACAGGGCCTGGCCGTGGATGAAGGCGAGACTGGACCTCCAGCCCCAGTTCCCTCCAAGTCCCTAACCCCTGCTGGCCGCCCTAGCGGCCCAGAGCCCAGGCCTCTGGCCAGAGTAGAGACTCTGAGGGAGGAGGTGCCCACAGACTTAAGGGTGTTTGAGCTGAACTCGGACAGTGGGAAGTCTACACCCTCCAACAATGGCAAGAAAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAGGACTTTGACTTGGACATGACCGAAGAAGAAGTACAAATGGCCCTTTCCAAAGTGGACGCCTCTGGTGAGGAGCCGCTTGAACAGGTCCTGGCATTCAGATGA

Related Sequences

XP_004850913.1 Protein

Bsdc1 PREDICTED: BSD domain-containing protein 1 isoform X4 [Heterocephalus glaber]

Length: 427 aa      View alignments
>XP_004850913.1
MAEGEDVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLTTEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPDGPLELFDTWLSEFCLEEKKGEISELLVDSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQRAEQSLSEEPGWEEEEEELVGISPTSPKEVKVPVTKTSTSSEKETHPCEETPVPAVEPPAEVTPSESSESISLVTQIANLATVLEVPVLPKNLSQKLLEASLEEQGLAVDEGETGPPAPVPSKSLTPAGRPSGPEPRPLARVETLREEVPTDLRVFELNSDSGKSTPSNNGKKGSSTDISEDWEKDFDLDMTEEEVQMALSKVDASGEEPLEQVLAFR