Details from NCBI annotation

Gene Symbol Ccdc28b
Gene Name coiled-coil domain containing 28B, transcript variant X2
Entrez Gene ID 101713829

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC28B ENSCPOG00000011980 (Guinea pig)

Gene Details

coiled-coil domain containing 28B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010778, Guinea pig)

Protein Percentage 87.56%
CDS Percentage 86.18%
Ka/Ks Ratio 0.17143 (Ka = 0.0821, Ks = 0.479)

CCDC28B ENSG00000160050 (Human)

Gene Details

coiled-coil domain containing 28B

External Links

Gene Match (Ensembl Protein ID: ENSP00000362704, Human)

Protein Percentage 87.56%
CDS Percentage 85.32%
Ka/Ks Ratio 0.13961 (Ka = 0.0808, Ks = 0.5789)

Ccdc28b ENSMUSG00000028795 (Mouse)

Gene Details

coiled coil domain containing 28B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030586, Mouse)

Protein Percentage 86.53%
CDS Percentage 82.73%
Ka/Ks Ratio 0.11365 (Ka = 0.0877, Ks = 0.7721)

Ccdc28b ENSRNOG00000047578 (Rat)

Gene Details

coiled coil domain containing 28B (Ccdc28b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066019, Rat)

Protein Percentage 86.53%
CDS Percentage 81.52%
Ka/Ks Ratio 0.10225 (Ka = 0.0885, Ks = 0.8655)

Genome Location

Sequence Coding sequence

Length: 717 bp    Location: 15430127..15435215   Strand: +
>XM_004850848.1
ATGCAAATCACCTCCCGCCAGTTTAGCTCCCACCCGCTCGCGTTCCCGGGAGGACATCGCGGAAAGCGAAGGAACTTGCATCGGGGCATCTCTCGGGACCTCAGACTTCCAGGCCTGAGGCCCAGCCAGCATCCAATGGATGACAAAAAGAAGAAAAGGAGTCCCAAGCCCTGCCTGGCCCAGCCAGCCCAGGCACCAAGCACACTTCGCAGGGTCCAGGTACCCACAAGCCACAGTGGCTCTTTGGCCCTGGGACTCCCTCATCTCCCATCCCCCAAGCAACGGGCCAAGTTCAAGAGAGTAGGCAAAGAGAAATGCCGCCCAGTGCTGGCCGGAGGTGGAGGTGGCTCTGCAGGCACGCCCCTGCAGCACTCCTTCCTGACCGAGGTGACTGACGTCTATGAGATGGAGGGGGGACTGCTGAATCTGCTCAATGATTTCCACTCAGGCAAGCTCCAGGCCTTTGGGAAGGAATGCTCCTTCGAGCAGCTGGAGCATGTGCGGGAGATGCAAGAGAAACTGGCCCGACTGCACTTCAGCCTGGATGTGTGTGGGGAGGAGGAGGACGAGGAAGAAGAGGACAGCGCCCCTGAGGGGTTGCCAGAAGAACAGAAAAAGACAATGGCAGACCGCAACCTGGACCAGCTGCTTAGCAATGAACTGACAGTGCAGTGCCCCTGTGTTTCCCAGAGGACAAAGGGATGCTGGATGGGATGA

Related Sequences

XP_004850905.1 Protein

Ccdc28b PREDICTED: coiled-coil domain-containing protein 28B isoform X2 [Heterocephalus glaber]

Length: 238 aa      View alignments
>XP_004850905.1
MQITSRQFSSHPLAFPGGHRGKRRNLHRGISRDLRLPGLRPSQHPMDDKKKKRSPKPCLAQPAQAPSTLRRVQVPTSHSGSLALGLPHLPSPKQRAKFKRVGKEKCRPVLAGGGGGSAGTPLQHSFLTEVTDVYEMEGGLLNLLNDFHSGKLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEEDEEEEDSAPEGLPEEQKKTMADRNLDQLLSNELTVQCPCVSQRTKGCWMG