Details from NCBI annotation

Gene Symbol Tmem39b
Gene Name transmembrane protein 39B, transcript variant X1
Entrez Gene ID 101708656

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM39B ENSCPOG00000006494 (Guinea pig)

Gene Details

transmembrane protein 39B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005847, Guinea pig)

Protein Percentage 97.01%
CDS Percentage 93.81%
Ka/Ks Ratio 0.08408 (Ka = 0.0187, Ks = 0.2228)

TMEM39B ENSG00000121775 (Human)

Gene Details

transmembrane protein 39B

External Links

Gene Match (Ensembl Protein ID: ENSP00000338165, Human)

Protein Percentage 98.17%
CDS Percentage 93.09%
Ka/Ks Ratio 0.0236 (Ka = 0.0083, Ks = 0.3528)

Tmem39b ENSMUSG00000053730 (Mouse)

Gene Details

transmembrane protein 39b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099648, Mouse)

Protein Percentage 96.54%
CDS Percentage 91.87%
Ka/Ks Ratio 0.03983 (Ka = 0.0156, Ks = 0.3918)

Tmem39b ENSRNOG00000023746 (Rat)

Gene Details

transmembrane protein 39b (Tmem39b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032295, Rat)

Protein Percentage 97.33%
CDS Percentage 91.78%
Ka/Ks Ratio 0.02586 (Ka = 0.0118, Ks = 0.4574)

Genome Location

Sequence Coding sequence

Length: 1506 bp    Location: 15303037..15323954   Strand: +
>XM_004850833.1
ATGCACTGTTGCTTTGTATTGAGTCCCACAGGAGGACGAAGAGGTCCCAATAGGACATCTTACTGTCGAAATCCACTCTGTGAGCCAGGATCCTCAGGGGGCTCTGGTGGGGGCCACACTTCCAGTGCATCAGTGACCAGTGTCCGTTCCCGCACCAGGAGCAGTTCTGGGACAGGCCTTGCCAGTCCTCCACTGGCTACCCAGACAGTCGTGCCTCTGCAGCACTGCAAGATCCCCGAACTGCCCGTCCAGGCCAGCATTCTGTTTGAGTTGCAGCTCTTCTTCTGCCAGCTCATAGCCCTCTTCGTCCACTACATCAACATCTACAAGACAGTGTGGTGGTATCCGCCCTCCCACCCGCCCTCCCACACTTCCCTGAATTTCCATCTGATCGACTTCAACTTGCTGATGGTGACCACCATTGTTCTGGGCCGCCGCTTCATTGGATCCATCGTGAAGGAGGCTTCTCAGAGGGGGAAAGTCTCCCTCTTTCGCTCCATCCTGCTGTTCCTCACCCGCTTCACCGTTCTCACGGCAACAGGCTGGAGTCTGTGCCGATCCCTAATCCACCTCTTCAGGACCTACTCCTTCCTGAACATCCTGTTCCTCTGCTATCCGTTTGGGATGTACATTCCATTCCTACAGCTGAACTGTGATCTCCGCAAGACAAACCTCTTCAGCCACATGGCCTCCATGGGGCCCCGGGAGGCAGTGAGTGGCCTGGCACGGAGTCGGGACTACCTGCTGACATTGCGGGAGACGTGGAAGCAACACACTCGACAGCTGTATGGCCCAGAAGCCATGCCCACCCATGCCTGCTGCCTGTCACCCAGCCTCATCCGCAGTGAAGTGGAGTTCCTCAAGATGGATTTCAATTGGCGTATGAAGGAAGTGCTTGTTAGCTCCATGCTGAGTGCCTATTACGTGGCCTTTGTACCTGTCTGGTTTGTGAAGAACACACATTACTATGACAAGCGTTGGTCCTGTGAGCTCTTCCTGCTGGTGTCTATCAGTACCTCAGTGATCCTCATGCAGCACCTACTGCCTGCCAGCTACTGTGACCTGCTGCACAAGGCTGCTGCCCATCTGGGCTGCTGGCAGAAGGTGGACCCAGCACTGTGCTCCAATGTGCTACAGCATCCGTGGACTGAAGAATGCATGTGGCCACAGGGTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAGCAGTAGGTCACTATAATGTGGCCATCCCCTCTGACGTCTCCCACTTCCGGTTCCATTTCTTTTTCAGCAAACCCCTTCGGATCCTCAACATCCTTCTGCTGCTAGAGGGCGCCGTCATTGTCTACCAGCTGTACTCCTTAATGTCCTCTGAAAAGTGGCACCAGACCATCTCACTGGCCCTCATCCTCTTCAGCAACTACTATGCCTTCTTCAAGCTGCTGCGGGACCGCCTGGTATTGGGCAAGGCCTACTCATACTCAGCCAGCCCCCAGAGAGACCTGGACCATCGGTTCTCCTGA

Related Sequences

XP_004850890.1 Protein

Tmem39b PREDICTED: transmembrane protein 39B isoform X1 [Heterocephalus glaber]

Length: 501 aa      View alignments
>XP_004850890.1
MHCCFVLSPTGGRRGPNRTSYCRNPLCEPGSSGGSGGGHTSSASVTSVRSRTRSSSGTGLASPPLATQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTTIVLGRRFIGSIVKEASQRGKVSLFRSILLFLTRFTVLTATGWSLCRSLIHLFRTYSFLNILFLCYPFGMYIPFLQLNCDLRKTNLFSHMASMGPREAVSGLARSRDYLLTLRETWKQHTRQLYGPEAMPTHACCLSPSLIRSEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLVSISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSKPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAYSYSASPQRDLDHRFS