Details from NCBI annotation

Gene Symbol Matn1
Gene Name matrilin 1, cartilage matrix protein
Entrez Gene ID 101697617

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MATN1 ENSCPOG00000010146 (Guinea pig)

Gene Details

matrilin 1, cartilage matrix protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009111, Guinea pig)

Protein Percentage 93.12%
CDS Percentage 91.03%
Ka/Ks Ratio 0.06408 (Ka = 0.0317, Ks = 0.4941)

MATN1 ENSG00000162510 (Human)

Gene Details

matrilin 1, cartilage matrix protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000362870, Human)

Protein Percentage 90.89%
CDS Percentage 89.74%
Ka/Ks Ratio 0.07679 (Ka = 0.0421, Ks = 0.548)

Matn1 ENSMUSG00000040533 (Mouse)

Gene Details

matrilin 1, cartilage matrix protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099636, Mouse)

Protein Percentage 90.69%
CDS Percentage 86.17%
Ka/Ks Ratio 0.04945 (Ka = 0.0474, Ks = 0.9579)

Matn1 ENSRNOG00000010932 (Rat)

Gene Details

matrilin 1, cartilage matrix protein (Matn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014666, Rat)

Protein Percentage 89.45%
CDS Percentage 85.87%
Ka/Ks Ratio 0.057 (Ka = 0.0526, Ks = 0.9221)

Genome Location

Sequence Coding sequence

Length: 1485 bp    Location: 14195935..14188140   Strand: -
>XM_004850795.1
ATGAAGGCCCTCTCGGCTGGCCTCGGGTTCTGTGCTCTGCTGCTGCTCCAGGCCCCATGCAGCCTCAGCCTTGTGCCCCAGTCCGGAGGGCACCTCTGTCGGACACGGCCCACGGACCTGGTGTTTGTTGTTGACAGCTCGCGCAGCGTGCAGCCCATGGAGTTTGAGAAGGTGAAGATGTTCCTGTCTCAGGTCATCGAGTCGCTGGACGTGGGGCCCAACGCCACCCGGGTGGGGTTGGTCAACTATGCCAGCTCCGTGAAGCAGGAGTTCCCACTGCGTGCCCACGGCTCCAAGGCTGCATTGCTGCAGGCCGTGGGCCGCATCCAGCCGCTGTCCACAGGCACCATGACTGGCCTGGCCCTACAGTTCGCCATCACCAGGGCCTTCAGTGACACCGAGGGCGGTCGCACCAGGTCCCCTGACATCAGCAAGGTGGTCATCGTGGTGACCGACGGGAGGCCCCAGGACAGTGTGAGGGAAGTATCTGTGCGGGCTCGGGCCAGCGGCATCGAGCTGTTCGCCATTGGAGTGGGCCGCGTGGACAAGGCCACGCTGCGGCAGATGGCCAGCGAGCCGCAGGACGAGCACGTGGACTACGTGGAGAGCTACAGCGTCATCGAGAAGCTGTCCAAGAAGTTCCAGGAGGCCTTCTGCGTGGTGTCAGACTTGTGTGCCACGGGGGACCACGACTGTGAGCAGGTGTGCCTCAGCTCGCCAGGCTCCTACACCTGTGCCTGCCACGAGGGCTTCACCCTGAATAGCGACGGCAAGACCTGCAATGTCTGCAGGGGCAGCAGTGGCAGCTCAGCCACTGACCTGGTTTTCCTCATCGATGGATCCAAGAGCGTGCGGCCAGAGAACTTCGAGCTGGTGAAGAAATTCATCAGCCAGATCGTGGACACGCTGGACGTGTCAGACAGGCTGGCCCAGGTGGGGCTGGTGCAGTACTCGAGCTCTGTGCGCCAGGAGTTCCCGCTGGGCCGCTTCCACACAAAGAAGGACATCAAGGCAGCTGTGCGGAACATGTCCTACATGGAGAAGGGAACCATGACTGGGGCTGCCCTCAAGTATCTCATCGACAACTCCTTCACGGTGACCAGCGGTGCCAGGCCCGGTGCCCAGAAGGTGGGCATTGTCTTCACGGACGGCCGGAGCCAGGACTACATCAATGATGCTGCCAGGAAGGCCAAGGATCTCGGCTTTAAGATGTTTGCTGTGGGTGTGGGCAACGCCGTAGAGGACGAGCTGAGGGAAATCGCCTCAGAGCCCGTGGCAGAGCACTACTTCTACACGGCTGACTTCAAGACCATCAACCAGATTGGCATGAAGTTGCAGAAGAAAATCTGTGTGGAGGAAGACCCATGTGCCTGCGAGTCCATTGTGAAATTCCAGGCCAAAGTGGAGGGGCTGCTGGAGGCCCTGACCAGGAAACTTGAAGCTGTGAGTAAGCGGCTGGCCATCCTGGAGAACAGAATCATCTAA

Related Sequences

XP_004850852.1 Protein

Matn1 PREDICTED: cartilage matrix protein [Heterocephalus glaber]

Length: 494 aa      View alignments
>XP_004850852.1
MKALSAGLGFCALLLLQAPCSLSLVPQSGGHLCRTRPTDLVFVVDSSRSVQPMEFEKVKMFLSQVIESLDVGPNATRVGLVNYASSVKQEFPLRAHGSKAALLQAVGRIQPLSTGTMTGLALQFAITRAFSDTEGGRTRSPDISKVVIVVTDGRPQDSVREVSVRARASGIELFAIGVGRVDKATLRQMASEPQDEHVDYVESYSVIEKLSKKFQEAFCVVSDLCATGDHDCEQVCLSSPGSYTCACHEGFTLNSDGKTCNVCRGSSGSSATDLVFLIDGSKSVRPENFELVKKFISQIVDTLDVSDRLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKYLIDNSFTVTSGARPGAQKVGIVFTDGRSQDYINDAARKAKDLGFKMFAVGVGNAVEDELREIASEPVAEHYFYTADFKTINQIGMKLQKKICVEEDPCACESIVKFQAKVEGLLEALTRKLEAVSKRLAILENRII