Details from NCBI annotation

Gene Symbol Ptafr
Gene Name platelet-activating factor receptor, transcript variant X2
Entrez Gene ID 101711912

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTAFR ENSCPOG00000024245 (Guinea pig)

Gene Details

Platelet-activating factor receptor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015534, Guinea pig)

Protein Percentage 92.11%
CDS Percentage 92.5%
Ka/Ks Ratio 0.15196 (Ka = 0.0378, Ks = 0.2484)

PTAFR ENSG00000169403 (Human)

Gene Details

platelet-activating factor receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000362965, Human)

Protein Percentage 83.63%
CDS Percentage 85.38%
Ka/Ks Ratio 0.15253 (Ka = 0.0918, Ks = 0.6016)

Ptafr ENSMUSG00000056529 (Mouse)

Gene Details

platelet-activating factor receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070925, Mouse)

Protein Percentage 79.47%
CDS Percentage 81.43%
Ka/Ks Ratio 0.16097 (Ka = 0.1203, Ks = 0.7474)

Ptafr ENSRNOG00000013231 (Rat)

Gene Details

platelet-activating factor receptor (Ptafr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017687, Rat)

Protein Percentage 79.18%
CDS Percentage 81.13%
Ka/Ks Ratio 0.15263 (Ka = 0.1247, Ks = 0.8173)

Genome Location

Sequence Coding sequence

Length: 1029 bp    Location: 12018244..11997782   Strand: -
>XM_004850747.1
ATGGAGTTAAATAGCTCTTCCCGTGTGGATTCAGAGTTTCGATACACTCTCTTCCCAGTTGTTTATAGTGTTATCTTTGTGCTGGGGATCATAGCCAATGGCTATGTGCTGTGGGTCTTTGCCCGCCTGTACCCTTCCAAGAAACTAAATGAGATAAAGATCTTCATGGTAAACCTCACTGTGGCTGACCTGCTTTTCCTGATCACCCTGCCACTGTGGATCGTCTACTACTCCAACCAAGGGAACTGGATTCTACCCAAATTCCTTTGTAACCTGGCTGGCTGCCTCTTCTTCATCAACACCTACTGCTCTGTAGCCTTCCTGGGAGTGATCACCTATAACCGCTTCCAGGCGGTAAGACATCCCATCAAGACGGCTCAAGCCACCACCCGAAAGCGTGGCATCGCTTTGTCCTTGGTCATCTGGGTGATCATTGTGGCTGCTGCATCCTACTTCCTTGTCATGGACTCCACCAACATAGTGTCCAATAAGGCAGGCTCAGGCACCGTCACTCGCTGCTTTGAGCATTATGAAGAGGGCAGCGAGCCTGTCCTCATCATCCACATCTGCATTGTGCTCGGCTTCTTCATTGTCTTTCTACTCATCCTCTTCTGCAACCTGGTCATCATTCGCACGCTGCTCACCCAGCCAGTGCAGCAGCAGCGCAATGCTGAGGTCAAGCGCCGGGCGCTGTGGATGGTCTGCACCGTTTTGGCAGTGTTCATCATCTGCTTTGTGCCACACCACATGGTACAGCTGCCCTGGACCCTCGCTGAGCTGGGGAAGTGGCCGAGCAGCAACCACCAGGCTATTAATGATGCCCATCAGATCACCCTCTGCCTCCTTAGCACCAACTGTGTCTTAGACCCTGTCATCTACTGTTTCCTCACCAAGAAGTTCCGAAGGCACCTCAGTGAAAAGCTTCACATCATGCGGAGCAGCCGGAAATGCTCCCGGGTCACCACTGACACAGGCACAGATGTGGCCATTCCAATCAACCACATTCCTGTCAATTCCCTCAAAATTTAG

Related Sequences

XP_004850804.1 Protein

Ptafr PREDICTED: platelet-activating factor receptor isoform X2 [Heterocephalus glaber]

Length: 342 aa      View alignments
>XP_004850804.1
MELNSSSRVDSEFRYTLFPVVYSVIFVLGIIANGYVLWVFARLYPSKKLNEIKIFMVNLTVADLLFLITLPLWIVYYSNQGNWILPKFLCNLAGCLFFINTYCSVAFLGVITYNRFQAVRHPIKTAQATTRKRGIALSLVIWVIIVAAASYFLVMDSTNIVSNKAGSGTVTRCFEHYEEGSEPVLIIHICIVLGFFIVFLLILFCNLVIIRTLLTQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHHMVQLPWTLAELGKWPSSNHQAINDAHQITLCLLSTNCVLDPVIYCFLTKKFRRHLSEKLHIMRSSRKCSRVTTDTGTDVAIPINHIPVNSLKI