Details from NCBI annotation

Gene Symbol Ahdc1
Gene Name AT hook, DNA binding motif, containing 1, transcript variant X8
Entrez Gene ID 101702198

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AHDC1 ENSCPOG00000022607 (Guinea pig)

Gene Details

AT hook, DNA binding motif, containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016325, Guinea pig)

Protein Percentage 97.5%
CDS Percentage 94.94%
Ka/Ks Ratio 0.0892 (Ka = 0.0133, Ks = 0.1488)

AHDC1 ENSG00000126705 (Human)

Gene Details

AT hook, DNA binding motif, containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000363123, Human)

Protein Percentage 96.69%
CDS Percentage 91.69%
Ka/Ks Ratio 0.04976 (Ka = 0.0164, Ks = 0.3292)

Ahdc1 ENSMUSG00000037692 (Mouse)

Gene Details

AT hook, DNA binding motif, containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101536, Mouse)

Protein Percentage 95.11%
CDS Percentage 88.23%
Ka/Ks Ratio 0.05393 (Ka = 0.0262, Ks = 0.4868)

Ahdc1 ENSRNOG00000042855 (Rat)

Gene Details

AT hook, DNA binding motif, containing 1 (Ahdc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059351, Rat)

Protein Percentage 94.79%
CDS Percentage 88.55%
Ka/Ks Ratio 0.06269 (Ka = 0.0281, Ks = 0.4476)

Genome Location

Sequence Coding sequence

Length: 4803 bp    Location: 11482589..11422369   Strand: -
>XM_004850724.1
ATGCGTGTGAAGCCCCAGGGCCTGGTGGTGACTTCCAGTGCCGTGTGCAGCTCTCCTGACTACCTCCGGGAGCCCAAGTACTACCCCGGCGGCCCCCCCGCCCCCCGGCCCTTGCTTCCCACCCGGCCCCCTGCCAGTCCACCTGACAAGGCCTTCTCCACCCACACCTTCTCCGAGAACCCACGCCCACCCCCACGCCGGGACCCCAGCACCCGACGCCCTCCAGTCCTTCCCAAGGGCGACGACCCACTGCCCCCAAGGGCTGCCCGGCCCATCTCCCAGGCTCGCTGCCCCATACCAGCCGGAGACAGCAGCTCCCGCTGCCACTGGGACAACGGGCGGGTGAACCTGCATCCAGTGGTGCAGCTGATTGACATCATGAAGGACCTGACACGCCTCTCCCAGGACCTGCAGCACAGTGGGGTGCATCTGGACTGTGGTGGGCTACGGCTGAGCCGGCCCCCTGCCCCGCCACCTGGTGATCTGCAGTACAGCTTCTTCTCTTCACCTAGCCTGGCCAACAGCATCCGCAGCCCTGAGGAGCGCGCCACCCCTCATGCCAAGTCAGAGCGACCCAGCCACCCCCTCTACGAGCCTGAGCCTGAGCCTAGGGACAGTCCCCAGCCTGGCCAAGGCCATAGTCCTGGAGCCACAGCTGCAGCCACTGGCTTGCCCCCAGAGCCTGAGCCAGATGGCCCTGATTACTCAGAACTCGCAGAAGCTGACATCCTCAGTGAGCTAGCCTCCCTTACGTGCCCCGAGGCCCAGCTGCTAGAGGCCCAGGCCCTAGAGCCACCATCGCCTGAGCCAGAGCCTCAGCTCCTGGACCCCCAGCCCCGTTTCCTGGACCCACAGGCACTAGAGCCACTGGGGGAAGCTTTGGAGTTGCCTCCCCTGCAACCTCTTGCTGACCCTCTGGGGCTGCCAAGCCTGGCTTTACAGGCCCTGGATACTTTGCCTGACTCCCTGGAGTCACAGCTGCTTGACCCCCAGGCACTTGACCCTCTGCCTAAGTTGTTGGATGTCCCAGGTCACCGTCTGGAGCCCCAACAGCCCCTGGGGCACTGTCCATTGGCCGAGCCCTTGCGCCTAGACTTGTGCTCACCCCATGGCCCCCCTGGGCCTGAGGGCCACCCCAAGTATGCCTTGCGGCGCACCGATAGGCCAAAGATCCTATGTCGCCGGCGGAAAGCTGGTCGGGGGCGTAAGGCAGATGCTGGACCTGAGGGCCGCCTGCTACCCCTGCCTATGCCCACAGGGCTGGGAGCTGTCCTGGCTGAGCCTCCACCACCACCACCTCCACTACCACCTGTCCTGCCAGGCCCAGGCCCAGTCCAAGAACTGGAGCCAGAATCTTCCCAGACTCCAGTGGTCCCTGCCCGCAAAGGCAAGTGCCGGGGTGTGAGGCGCATGGTGGTGAAGATGGCTAAGATCCCTGTATCACTGGGGAGGCGGAATAAGACCACGTACAAAGTGTCATCTTTGAGTAGCAGCCTGAGCGTGGAGGGCAAGGAGTTAGGCCTACGAGTATCAGCAGAGCCCACCCCACTGCTGAAGATGAAGAACAATGGGCGAAATGTGGTCGTGGTCTTCCCACCAGGTGAGATGCCAATTATTCTCAAGCGTAAGCGGGGCCGTCCTCCTAAGAACCTACTGCTGGGTCCCGGCAAGCCCAAGGAGCCAGCAGTGGTAGCAACCGAGGCAGCCACCGTGGCTGCAGCCACCATGGCCATCCCAGAGGTAAAGAAACGACGGCGGCGGAAGCAGAAGCTGGCATCCCCCCAGCCGTCCTATGCAGCAGATGCCAATGACAGTAAGGCTGAGTACTCAGATGTCCTCGCCAAACTGGCCTTCCTGAACCGCCAGAGCCAGTGTGCTGGGCGGTGCTCACCACCCCGCTGCTGGACACCCAGTGAGCCTGAGTCTGTACACCAGGCCCCTGACACCCAGAGCATCTCCCACTTCCTGCATCGTGTGCAGGGCTTCCGGCGCCGTGGGGGCAAGGCAGGTGGTTTTGGTGGCCGGGGTGGGGGCCATGCAGCCAAGGCAGCCAGATGCTCTTTCAGTGACTTCTTTGAGGGCATCGGCAAGAAAAAAAAGGTGGTGACAGTGGCAGCTGCTGGGGTTGGAGGTCCCGGCCTCACTGAGTTGGGGCACCCACGAAAACGGGGCCGGGGGGAGGTGGACGCCTTGACAGGGAAGCCCAAGCGGAAGAGGCGGTCCCGGAAAAATGGGACTCTGTTTCCAGAGCAGGTACCCAGTGGCCCAGGCTTTGGGGAGGCTGGTGTTGAGTGGCCTGGGGACAAGAGTGGTGGCTGGGCCCCTCACCATGGGCACCCAGGCGGGCAAGCTGGCCGAAACTGTGGTTTCCAGGGGACCGAGGCCCGGGCTTTTGCCTCCACTGGGCTGGAGAGTGGGGCTTCAGGCCGTGGCAGCTACTACAGCACGGCCACGCCCTCGGGCCAGACCGAGCTCAGCCAGGAGCGCCAAAACCTCTTCACTGGCTATTTTCGCTCACTGCTTGATTCGGATGACTCCTCCGACCTCTTGGACTTTGCCCTCTCAGCCTCCCGCCCAGAGTCCCGGAAGGCATCAGGCACCTACACAGGGCCACCCACCAGTGCCCTGCCCACCCAGCGGGGCCTGGCCACCTTCCCCAGCCGAGGAGCCAAGGCCAGCCCAGTGGCAGTGGGCAGCAGTGGGGCTGGGGCAGACCCTTCCTTCCAGCCTGTCCTGCCCACTCGCCAGACCTTTCCACCAGGACGAGCAACAAGCTATGGGATAACCCCAGCCACTTCAGATTGCCGGGCAGCCGAAACCTTCCCAAAGCTGGCTCCCCCACCTTCAGCCGTGGCCCGATCTCCAACTACCCACCCACCCACCAACACCTACCCACCCCAGTATGGTGGATATGGGGCTGGACAAAGTGTATTCGCCCCAGCAAAGCCCTTTACAGGCCAGGACTGCGCTAACAGCAAGGACTGCAGCTTCGCCTATGGCAGTGGCAATAGCCTTCCTGCCTCACCCAGCAGTGCCCACAGTGCTGGCTATGCCCCACCGCCTACTGGGGGTCCCTGCTTGCCACCAAGCAAGGCCTCCTTCTTCAACAGCTCTGAGGGGGCCCCTTTCTCTGGTTCAGCTCCCACACCCCTGCGCTGTGACAGCCGGGCCAGCACTGTCTCGCCTGGTGGCTACATGGTACCCAAGGGCACCACAGCTTCTGCCACCTCTGCAGCCTCTGCCGCTTCCTCCTCCTCCTCCTCCTTTCAGCCCTCGCCTGAGAACTGTCGGCAGTTTGCGGGGGCTTCTCAGTGGCCTTTCCGGCAGGGTTATGGAGGCCTGGACTGGGCCTCAGAGGCCTTTAGTCAGCTCTACAACCCCAGTTTTGACTGCCACGTCAGTGAGCCCAATGTGATCCTGGACATCTCCAACTACACGCCACAGAAGGTGAAGCAGCAGACAGCCGTGTCTGAGACCTTCTCTGAGTCGTCCTCTGACAGCACCCAATTCAATCAGCCAGTCAGTGGCGGCGGTTTTCGTCGTGCCAACAGTGAGGCCTCAAGCAGTGAGGGCCAGTCAAGCCTGTCCAGCCTAGAGAAACTGATGATGGACTGGAACGAGGCATCATCCGCCCCTGGCTACAACTGGAACCAGAGTGTCCTCTTCCAGAGCAGTTCCAAGCCTGGCCGTGGACGGCGGAAGAAGGTGGACCTGTTTGAGGCCTCACATCTGGGCTTCTCAACATCTGCCTCAGCTGCTGCCTCAGGCTACCCTTCCAAACGGAGCACTGGGCCCCGGCAGCCACGGGGTGGTCGGGGCAGTGGGGCCTGCTCAGCTAAGAAGGAGCGAGGTGGTGCAGCTGCCAAAGCCAAGTTCATCCCCAAGCCACAGCCAGTCAACCCACTATTCCAGGACAGTCCAGACCTTGGCCTGGACTACTACAGTGGGGACAGCAGCATGTCACCACTGCCCTCTCAGTCAAGGGCCTTTAGTGTTGGAGAGCGAGACCCCTGTGACTTCATGGGGCCCTACTCCATGAACCCATCCACACCTTCCGACGGCACCTTCGGCCAAGGCTTCCACTGCGACTCACCCAGCCTGGGTGCTCCTGACCTTGATGGCAAGCATTTCCCGCCACTGGCCCACCCACCCACAGTGTTTGATGCTGGCCTCCAGAAGGCATACTCACCCACCTGCTCACCCACACTAGGCTTCAAGGAAGAGCTGCGGCCACCACCCACAAAGCTAGCTGCCTGCGAGCCCCTCAAGCATGGGCTCCAGGGGGCCAGCCTGGGCCACACGGCTGCAGCCCAGGCCCACCTGAGCTGCCGGGACCTGCCCCTGGGCCAGCCCCACTACGATTCCCCCAGTTGCAAGGGCACAGCCTATTGGTACCCACCAGGCTCAGCTGCCCGTAGCCCACCCTATGAAGGCAAGGTGGGCACAGGGCTGCTGGCTGACTTCCTGGGCAGGACGGAGGCCGCGTGCCTCACCGCCCCACACCTGGCCAGCCCACCGGCCACGCCCAAGGCCGACAAGGAGCCACTAGAGATGGCCCGGCCACCTGGTCCACCCCGTGGCCCTGCTGCAGCCGCTGCTGGCTATGGCTGCCCACTCCTTAGTGACTTGACCCTGTCCCCCGTGCCGAGGGACTCGCTGCTGCCCCTGCAGGACACTGCCTACAGGTATCCAGGCTTTATGCCGCAGGCGCATCCTGGCCTGGGTGGGGGCCCCAAGAGCGGCTTCCTGGGGCCCATGGCGGAACCTCACCCTGAGGACACATTCACCGTCACCTCCCTGTAG

Related Sequences

XP_004850781.1 Protein

Ahdc1 PREDICTED: AT-hook DNA-binding motif-containing protein 1 isoform X8 [Heterocephalus glaber]

Length: 1600 aa      View alignments
>XP_004850781.1
MRVKPQGLVVTSSAVCSSPDYLREPKYYPGGPPAPRPLLPTRPPASPPDKAFSTHTFSENPRPPPRRDPSTRRPPVLPKGDDPLPPRAARPISQARCPIPAGDSSSRCHWDNGRVNLHPVVQLIDIMKDLTRLSQDLQHSGVHLDCGGLRLSRPPAPPPGDLQYSFFSSPSLANSIRSPEERATPHAKSERPSHPLYEPEPEPRDSPQPGQGHSPGATAAATGLPPEPEPDGPDYSELAEADILSELASLTCPEAQLLEAQALEPPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPSLALQALDTLPDSLESQLLDPQALDPLPKLLDVPGHRLEPQQPLGHCPLAEPLRLDLCSPHGPPGPEGHPKYALRRTDRPKILCRRRKAGRGRKADAGPEGRLLPLPMPTGLGAVLAEPPPPPPPLPPVLPGPGPVQELEPESSQTPVVPARKGKCRGVRRMVVKMAKIPVSLGRRNKTTYKVSSLSSSLSVEGKELGLRVSAEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGPGKPKEPAVVATEAATVAAATMAIPEVKKRRRRKQKLASPQPSYAADANDSKAEYSDVLAKLAFLNRQSQCAGRCSPPRCWTPSEPESVHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGGHAAKAARCSFSDFFEGIGKKKKVVTVAAAGVGGPGLTELGHPRKRGRGEVDALTGKPKRKRRSRKNGTLFPEQVPSGPGFGEAGVEWPGDKSGGWAPHHGHPGGQAGRNCGFQGTEARAFASTGLESGASGRGSYYSTATPSGQTELSQERQNLFTGYFRSLLDSDDSSDLLDFALSASRPESRKASGTYTGPPTSALPTQRGLATFPSRGAKASPVAVGSSGAGADPSFQPVLPTRQTFPPGRATSYGITPATSDCRAAETFPKLAPPPSAVARSPTTHPPTNTYPPQYGGYGAGQSVFAPAKPFTGQDCANSKDCSFAYGSGNSLPASPSSAHSAGYAPPPTGGPCLPPSKASFFNSSEGAPFSGSAPTPLRCDSRASTVSPGGYMVPKGTTASATSAASAASSSSSSFQPSPENCRQFAGASQWPFRQGYGGLDWASEAFSQLYNPSFDCHVSEPNVILDISNYTPQKVKQQTAVSETFSESSSDSTQFNQPVSGGGFRRANSEASSSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSSSKPGRGRRKKVDLFEASHLGFSTSASAAASGYPSKRSTGPRQPRGGRGSGACSAKKERGGAAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGDSSMSPLPSQSRAFSVGERDPCDFMGPYSMNPSTPSDGTFGQGFHCDSPSLGAPDLDGKHFPPLAHPPTVFDAGLQKAYSPTCSPTLGFKEELRPPPTKLAACEPLKHGLQGASLGHTAAAQAHLSCRDLPLGQPHYDSPSCKGTAYWYPPGSAARSPPYEGKVGTGLLADFLGRTEAACLTAPHLASPPATPKADKEPLEMARPPGPPRGPAAAAAGYGCPLLSDLTLSPVPRDSLLPLQDTAYRYPGFMPQAHPGLGGGPKSGFLGPMAEPHPEDTFTVTSL