Details from NCBI annotation

Gene Symbol Wdtc1
Gene Name WD and tetratricopeptide repeats 1, transcript variant X3
Entrez Gene ID 101725803

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WDTC1 ENSCPOG00000012347 (Guinea pig)

Gene Details

WD and tetratricopeptide repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011109, Guinea pig)

Protein Percentage 99.7%
CDS Percentage 95.62%
Ka/Ks Ratio 0.00688 (Ka = 0.0013, Ks = 0.1954)

WDTC1 ENSG00000142784 (Human)

Gene Details

WD and tetratricopeptide repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000355317, Human)

Protein Percentage 99.11%
CDS Percentage 93.29%
Ka/Ks Ratio 0.01217 (Ka = 0.004, Ks = 0.3309)

Wdtc1 ENSMUSG00000037622 (Mouse)

Gene Details

WD and tetratricopeptide repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040647, Mouse)

Protein Percentage 97.04%
CDS Percentage 90.34%
Ka/Ks Ratio 0.02775 (Ka = 0.014, Ks = 0.5049)

Wdtc1 ENSRNOG00000008377 (Rat)

Gene Details

WD and tetratricopeptide repeats 1 (Wdtc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011311, Rat)

Protein Percentage 97.49%
CDS Percentage 89.94%
Ka/Ks Ratio 0.02246 (Ka = 0.0121, Ks = 0.5406)

Genome Location

Sequence Coding sequence

Length: 2034 bp    Location: 11164001..11214716   Strand: +
>XM_004850697.1
ATGGCAAAAGTCAACATAACTAGAGACCTCATCCGCAGACAGATCAAGGAACGAGGTGCCCTGCGCTTTGAGCGGCGATATCATGTCACTGACCCCTTTATCCGGAGGCTGGGCCTGGAAGCAGAGCTGCAGGGTCACTCAGGATGTGTCAACTGTCTGGAGTGGAATGAGAAAGGAGATTTGCTGGCCTCTGGTTCCGATGACCAGCACACAATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACTGCAAATATCTTCTCTGTCAAGTTCCTGCCTCACGCTGGGGACCGCATCTTGATCACGGGGGCAGCTGACTCCAAGGTGCATGTTCACGACCTAACAGTAAAGGAGACTATCCACATGTTTGGAGACCACACAAATCGGGTAAAGCGCATTGCCACAGCACCTATGTGGCCCAACACCTTCTGGAGTGCTGCTGAGGATGGGCTTATCCGCCAGTATGACCTCCGGGAGAACAGCAAACACTCAGAGGTGCTGATTGATCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACAGTCAATCCCCAGGACAATAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTCGTGAGACTCTACGACATCCGCATGATCCATAACCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCAGGTGTGCACACCTTCTGTGACAGGCAGAAGCCCCTTCCGGATGGTGCAGCCCAGTATTATGTAGCAGGGCATCTGCCAGTGAAGCTGCCTGACTATAACAACCGTCTGAGAGTGCTGGTTGCCACCTATGTGACCTTCAGCCCCAATGGCACAGAGCTGCTAGTCAACATGGGAGGGGAGCAGGTCTATTTGTTTGACTTGACCTACAAACAGCGGCCATACACCTTCCTCTTGCCTAGAAAATGCCACTCCTCAGGGGAAGTCCTGAATGGCAAGATGTCCACCAACGGTGTGTCCAATGGTGTGTCTAATGGCCTACATCTTCACAGCAACGGCTTCCGGCTACCAGAAAATACAGGCCATGTCAGCCCCCAAGTAGAGTTGCCCCCATATCTGGAACGTGTGAAGCAGCAAGCCAATGAGGCCTTTGCCTGCCAGCAGTGGACCCAGGCCATTCAGCTTTACAGTAAGGCCGTGCAGAGGGCCCCTCACAATGCCATGCTCTATGGAAACCGAGCTGCTGCCTACATGAAGCGCAAGTGGGACGGTGACCACTATGATGCCCTGAGGGACTGTCTCAAGGCCATCTCCCTCAATCCATGCCATCTGAAGGCACACTTCCGCCTGGCTCGCTGCCTTTTTGAGCTCAAGTATGTGGCTGAGGCCCTGGAGTGCCTGGATGACTTCAAAGGGAAGTTCCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCATTGGGCCGAGACATCACAGCCGCCCTCTTCTCCAAAAACGATGGTGAGGAGAAGAAGGGAGCTGGTGGTGGTGGCCCTGTCCGTCTCCGAAGCACAAGCCGAAAGGACTCCATCTCAGAAGATGAGATGGTGCTGCGAGAACGAAGCTACGACTACCAGTTCCGCTACTGTGGCCACTGCAACACCACCACAGATATCAAGGAGGCCAATTTCTTCGGCAGCAATGCTCAGTACATCGTCAGTGGCTCTGATGATGGCTCCTTCTTCATCTGGGAAAAAGAGACCACCAACCTTGTCCGAGTGCTCCAGGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACACCCCAGCTATTGCTTCCTGGCTACCAGCGGCATCGACCCTGTCGTGCGACTCTGGAACCCCCGACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTAGAGGACATGGAGGGTGCCTCTCAGGCCAACCAAAGGCGCATGAATGCAGACCCCTTGGAGGTGATGCTGCTCAACATGGGCTACCGGATCACAGGCCTGAGCAGTGGGGGTGCCGGGGCCTCTGATGATGAGGACAGCTCCGAGGGCCAGGTGCAGTGCCGGCCCAGCTAG

Related Sequences

XP_004850754.1 Protein

Wdtc1 PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Heterocephalus glaber]

Length: 677 aa      View alignments
>XP_004850754.1
MAKVNITRDLIRRQIKERGALRFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSSGEVLNGKMSTNGVSNGVSNGLHLHSNGFRLPENTGHVSPQVELPPYLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDITAALFSKNDGEEKKGAGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGAGASDDEDSSEGQVQCRPS