Sequence details NCBI ID: XM_004850657.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rps6ka1
Gene Name ribosomal protein S6 kinase, 90kDa, polypeptide 1, transcript variant X5
Entrez Gene ID 101712979

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPS6KA1 ENSCPOG00000003945 (Guinea pig)

Gene Details

ribosomal protein S6 kinase, 90kDa, polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003563, Guinea pig)

Protein Percentage 97.14%
CDS Percentage 93.32%
Ka/Ks Ratio 0.06156 (Ka = 0.0168, Ks = 0.2722)

RPS6KA1 ENSG00000117676 (Human)

Gene Details

ribosomal protein S6 kinase, 90kDa, polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000435412, Human)

Protein Percentage 94.69%
CDS Percentage 90.66%
Ka/Ks Ratio 0.07572 (Ka = 0.0311, Ks = 0.4113)

Rps6ka1 ENSMUSG00000003644 (Mouse)

Gene Details

ribosomal protein S6 kinase polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101514, Mouse)

Protein Percentage 98.23%
CDS Percentage 91.7%
Ka/Ks Ratio 0.0176 (Ka = 0.0079, Ks = 0.4496)

Rps6ka1 ENSRNOG00000042411 (Rat)

Gene Details

ribosomal protein S6 kinase polypeptide 1 (Rps6ka1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060054, Rat)

Protein Percentage 97.69%
CDS Percentage 90.84%
Ka/Ks Ratio 0.02128 (Ka = 0.0105, Ks = 0.4954)

Genome Location

Sequence Coding sequence

Length: 2208 bp    Location: 10527040..10566718   Strand: +
Raw sequence   
>XM_004850657.1
ATGCCGCTCGCCCAGCTCAAGGAGCCCTGGCCGCTCATGGAGCTGGTGCCGCTGGACCCGGAGAATGGACAAGCCTCAGGGGAAGAAGCTGGACTCCAGCCATCCAAGGATGAGGGCATCCTCAAGGAGATCTCCATCACGCACCATGTCAAGGCTGGCTCCGAGAAGGCTGACCCATCCCATTTCGAGCTCCTCAAGGTTCTGGGCCAGGGATCCTTTGGCAAAGTCTTCCTGGTACGCAAAGTCACCCGGCCTGACAGTGGGCACCTGTATGCCATGAAAGTGCTAAAGAAGGCAACACTGAAAGTACGTGATCGTGTTCGGACCAAGATGGAGAGAGACATTCTGGCTGATGTGAACCACCCATTTGTGGTGAAGCTGCACTATGCCTTCCAGACCGAGGGCAAGCTCTATCTCATTCTGGACTTCCTGCGTGGTGGGGACCTCTTCACACGGCTCTCAAAAGAGGTTATGTTCACTGAGGAGGATGTGAAGTTTTACTTGGCTGAGCTGGCTCTGGGCCTGGACCACCTGCACAGCCTGGGCATCATTTACAGAGACCTCAAGCCTGAGAACATCCTTCTGGATGAGGAGGGCCACATCAAACTGACTGACTTTGGCCTGAGCAAGGAGGCCATTGACCATGAGAAGAAGGCCTACTCTTTCTGTGGGACAGTGGAGTACATGGCCCCAGAAGTTGTCAACCGCCAGGGCCACACCCACAGCGCAGACTGGTGGTCCTATGGGGTACTGATGTTTGAGATGCTGACGGGCTCCCTGCCCTTCCAGGGGAAGGACCGGAAGGAGACTATGACCTTGATTTTGAAGGCAAAGCTAGGCATGCCCCAGTTTCTGAGCACGGAAGCCCAGAGCCTCCTGCGCGCCCTGTTCAAGCGGAATCCTGCCAACCGGCTTGGCTCTGGTCCTGATGGGGCAGAGGAAATCAAGAGGCACGTCTTCTACTCCACAATTGACTGGAATAAGCTGTACCGACGTGAAATCAAGCCACCCTTCAAGCCAGCCGTGGCTCAGCCTGATGACACCTTCTACTTTGACACGGAGTTCACATCCCGGACACCCAAGGATTCCCCAGGCGTCCCCCCCAGCGCCGGTGCCCATCAGCTCTTCCGTGGCTTCAGCTTCGTGGCCACTGGCCTGATGGAGGACGATGGCAAGCCTCGGGCCACACAGGCGCCCCTGCACTCAGTGGTACAGCAACTCCATGGGAAGAACCTAGTTTTTAGTGACGGCTACGTGATAAAGGAGACGATCGGTGTGGGCTCCTACTCTGTGTGCAAGCGCTGTGTCCACAAGGCCACCAACATGGAATATGCTGTCAAGGTCATCGACAAGAGCAAGAGGGATCCCTCAGAAGAGATTGAGATTCTTCTGCGGTATGGGCAGCACCCCAACATCATCACACTAAAAGATGTATACGATGACGGCAAGCATGTGTACCTGGTGACAGAGCTGATGCGGGGTGGGGAGCTGCTGGACAAGATCCTTCGGCAGAAGTTCTTCTCAGAGCGGGAGGCCAGTTTCGTCCTCCACACCATTGGGAAGACTGTGGAGTATCTGCACTCACAAGGGGTTGTGCACAGGGACCTCAAGCCCAGCAACATCCTCTTTGTGGATGAGTCTGGGAACCCCGAGTGCCTACGCATCTGTGACTTTGGCTTTGCCAAGCAGCTGCGGGCTGAAAACGGACTCCTCATGACGCCTTGCTACACAGCCAACTTCGTAGCACCTGAGGTGCTGAAGCGCCAAGGCTATGATGAAGGCTGTGACATCTGGAGCCTGGGCATTCTGCTATACACCATGCTGGCTGGATACACTCCATTTGCCAATGGGCCCAGTGACACACCAGAGGAGATCCTGACCCGGATTGGCAGTGGAAAGTTTACCCTCATCGGGGGAAATTGGGACACAGTTTCAGAGACAGCCAAGGACTTGGTATCCAAGATGCTGCATGTGGACCCCCACCAGCGTCTCACAGCCAAGCAGGTCCTGCAGCATCCATGGATCACCCAGAAAGACAAGCTTCCTCAGAGCCAGCTGTCTCACCAGGACCTGCAGCTGGTGAAGGGAGCCATGGCTGCCACGTACTCCGCACTCAACAGCTCCAAGCCCACCCCCCAGCTGAAGCCCATCGAGACCTCCATCCTGGCCCAGCGGCGGGTGAGAAAGCTGCCATCCACCACCCTGTGA

Related Sequences

XP_004850714.1 Protein

Rps6ka1 PREDICTED: ribosomal protein S6 kinase alpha-1 isoform X5 [Heterocephalus glaber]

Length: 735 aa      View alignments
>XP_004850714.1
MPLAQLKEPWPLMELVPLDPENGQASGEEAGLQPSKDEGILKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHTHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDDGKPRATQAPLHSVVQQLHGKNLVFSDGYVIKETIGVGSYSVCKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILFVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLIGGNWDTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKPIETSILAQRRVRKLPSTTL