Details from NCBI annotation

Gene Symbol Pafah2
Gene Name platelet-activating factor acetylhydrolase 2, 40kDa, transcript variant X1
Entrez Gene ID 101703371

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAFAH2 ENSCPOG00000003472 (Guinea pig)

Gene Details

platelet-activating factor acetylhydrolase 2, 40kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003137, Guinea pig)

Protein Percentage 88.52%
CDS Percentage 91.5%
Ka/Ks Ratio 0.30655 (Ka = 0.0587, Ks = 0.1915)

PAFAH2 ENSG00000158006 (Human)

Gene Details

platelet-activating factor acetylhydrolase 2, 40kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000363400, Human)

Protein Percentage 87.5%
CDS Percentage 89.29%
Ka/Ks Ratio 0.25037 (Ka = 0.0689, Ks = 0.2752)

Pafah2 ENSMUSG00000037366 (Mouse)

Gene Details

platelet-activating factor acetylhydrolase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101495, Mouse)

Protein Percentage 78.72%
CDS Percentage 82.22%
Ka/Ks Ratio 0.22076 (Ka = 0.1227, Ks = 0.5557)

Pafah2 ENSRNOG00000022288 (Rat)

Gene Details

platelet-activating factor acetylhydrolase 2 (Pafah2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034439, Rat)

Protein Percentage 80.51%
CDS Percentage 82.65%
Ka/Ks Ratio 0.19488 (Ka = 0.1139, Ks = 0.5846)

Genome Location

Sequence Coding sequence

Length: 1179 bp    Location: 10076907..10045093   Strand: -
>XM_004850624.1
ATGGGGACCAGCCAGTCCATGTGCTTTCCACCTGTCTCCGGACCCCACCTTGTAGGCTGTGGGGATGTGATGGAGGGCCAGGGTCTCCAGGGGAGCTTCTTTCGACTCTTCTACCCCTGCCAAGCGGCAGCAGAGACCACGGAGCAACCACTGTGGATTCCCCGCTCCGAGTACTGCACTGGCCTGGCTGATTACCTGCAGTTTAATAAGCGCTGGGTGGGGTTGCTGCTCAGCCTGGCTGTGGGATCTTGTCGCCTGCCTGTCAGCTGGAATGGCCCCTTTAAGACAAAGGACTCTGGATACCCCTTGATCATTTTCTCCCATGGCCTAGGAGCTTTCAGGACACTCTATTCAGCCTTCTGCATGGAGCTGGCCTCCCGTGGCTTTGTGGTGGTTGTGCCAGAGCACAGGGACCAGTCAGCCGCTGCTACCTATTTCTGCAAGCAGGCCCCAGGGGAGAACCAGCCCTCCAATGAGTCACTAGAGGAGGAATGGATCCCTCATCGTCGAATTGAGGAAGGGGAAAAGGAATTCCATGTTCGGAATCCCCAGGTACACCAGCGGGTAAAGGAGTGCATGCACGTGCTGAGGATCCTGCAGGAAGTCACTGCAGGGAGGACTGTCCTCAACATCTTGCCTGGTGGGTTGGATCTGATGACTTTGAAGGGTAGCATCGACATGAGCCGCGTGGCTATGATGGGACATTCATTTGGAGGGGCCACAGCTATTCTGGCTTTGGGCAAGGAGGCCCAGTTTCGGTGTGCTGTGGCCCTGGATGCTTGGATGTTTCCTCTGGAACAAGACTTTTACCCCAAGGCCCAGGGCCCTGTGTTCTTTATCAATGCTGAGAAATTCCAGACAGTGGAGAGTGTCAACTTGATGAAGAAGATATGTGCCCAGCATGAACAGTCCAGGATCATAACTGTCCTTGGCTCTATTCATCGGAGTCAAACTGACTTTGCTTTTGCGACTGGCAACTTGCTTGGTAAATTCTTATCCGCTCAAACCCGTGGGAGCTTGGACCCCTACCAAGGTCAGGAGATTATGGTGCGGGCCATGTTGGCTTTCCTGCAGAAGCACCTTGACCTGCAAGAGGACTATGACCAGTGGAACAACTTCATTGAAGGCGTTGGACCATCACTCACTCCAGGCGCCCCGCACCATCTGTCAAGTCTATAG

Related Sequences

XP_004850681.1 Protein

Pafah2 PREDICTED: platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X1 [Heterocephalus glaber]

Length: 392 aa      View alignments
>XP_004850681.1
MGTSQSMCFPPVSGPHLVGCGDVMEGQGLQGSFFRLFYPCQAAAETTEQPLWIPRSEYCTGLADYLQFNKRWVGLLLSLAVGSCRLPVSWNGPFKTKDSGYPLIIFSHGLGAFRTLYSAFCMELASRGFVVVVPEHRDQSAAATYFCKQAPGENQPSNESLEEEWIPHRRIEEGEKEFHVRNPQVHQRVKECMHVLRILQEVTAGRTVLNILPGGLDLMTLKGSIDMSRVAMMGHSFGGATAILALGKEAQFRCAVALDAWMFPLEQDFYPKAQGPVFFINAEKFQTVESVNLMKKICAQHEQSRIITVLGSIHRSQTDFAFATGNLLGKFLSAQTRGSLDPYQGQEIMVRAMLAFLQKHLDLQEDYDQWNNFIEGVGPSLTPGAPHHLSSL